RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 C19orf44Q9H6X5 657 aa20.21■□□□□ 0.83
SSBP1-201ENST00000265304 USP47Q96K76 1375 aa20.21■□□□□ 0.83
SSBP1-201ENST00000265304 QRICH2Q9H0J4 1663 aa20.2■□□□□ 0.82
SSBP1-201ENST00000265304 CENPJQ9HC77 1338 aaPredicted RBP20.2■□□□□ 0.82
SSBP1-201ENST00000265304 SLC24A1O60721 1099 aa20.19■□□□□ 0.82
SSBP1-201ENST00000265304 CDC42BPGQ6DT37 1551 aa20.18■□□□□ 0.82
SSBP1-201ENST00000265304 TESK2Q96S53 571 aa20.18■□□□□ 0.82
SSBP1-201ENST00000265304 POGKQ9P215 609 aa20.17■□□□□ 0.82
SSBP1-201ENST00000265304 CERKQ8TCT0 537 aa20.16■□□□□ 0.82
SSBP1-201ENST00000265304 ST20-MTHFSA0A0A6YYL1 179 aa20.15■□□□□ 0.82
SSBP1-201ENST00000265304 EIF4G2P78344 907 aaKnown RBP eCLIP20.15■□□□□ 0.82
SSBP1-201ENST00000265304 PUS7Q96PZ0 661 aaKnown RBP20.14■□□□□ 0.81
SSBP1-201ENST00000265304 FMN2Q9NZ56 1722 aa20.13■□□□□ 0.81
SSBP1-201ENST00000265304 MSH6P52701 1360 aa20.13■□□□□ 0.81
SSBP1-201ENST00000265304 RBM33Q96EV2 1170 aaKnown RBP20.12■□□□□ 0.81
SSBP1-201ENST00000265304 WASLO00401 505 aaPredicted RBP20.1■□□□□ 0.81
SSBP1-201ENST00000265304 HSPA5P11021 654 aaKnown RBP20.1■□□□□ 0.81
SSBP1-201ENST00000265304 CADPS2Q86UW7 1296 aa20.1■□□□□ 0.81
SSBP1-201ENST00000265304 TULP4Q9NRJ4 1543 aa20.1■□□□□ 0.81
SSBP1-201ENST00000265304 MINK1Q8N4C8 1332 aaPredicted RBP20.08■□□□□ 0.81
SSBP1-201ENST00000265304 SAFB2Q14151 953 aaKnown RBP eCLIP20.08■□□□□ 0.81
SSBP1-201ENST00000265304 ANKARQ7Z5J8 1434 aa20.08■□□□□ 0.8
SSBP1-201ENST00000265304 USP32Q8NFA0 1604 aa20.07■□□□□ 0.8
SSBP1-201ENST00000265304 RGPD8O14715 1765 aaPredicted RBP20.07■□□□□ 0.8
SSBP1-201ENST00000265304 MST1RQ04912 1400 aa20.07■□□□□ 0.8
SSBP1-201ENST00000265304 EVC2Q86UK5 1308 aa20.05■□□□□ 0.8
SSBP1-201ENST00000265304 ATF3P18847 181 aa20.05■□□□□ 0.8
SSBP1-201ENST00000265304 C14orf37Q86TY3 774 aa20.04■□□□□ 0.8
SSBP1-201ENST00000265304 CDK19Q9BWU1 502 aa20.04■□□□□ 0.8
SSBP1-201ENST00000265304 HIRIP3Q9BW71 556 aaPredicted RBP20.03■□□□□ 0.8
SSBP1-201ENST00000265304 SLAIN2Q9P270 581 aa20.03■□□□□ 0.8
SSBP1-201ENST00000265304 ATP7BP35670 1465 aa20.03■□□□□ 0.8
SSBP1-201ENST00000265304 C1orf167Q5SNV9 1468 aa20.03■□□□□ 0.8
SSBP1-201ENST00000265304 TOPAZ1Q8N9V7 1692 aa20.03■□□□□ 0.8
SSBP1-201ENST00000265304 ITSN1Q15811 1721 aa20.02■□□□□ 0.79
SSBP1-201ENST00000265304 TOM1O60784 492 aa20.01■□□□□ 0.79
SSBP1-201ENST00000265304 TMF1P82094 1093 aa20.01■□□□□ 0.79
SSBP1-201ENST00000265304 PRR36Q9H6K5 1346 aa20.01■□□□□ 0.79
SSBP1-201ENST00000265304 DISP3Q9P2K9 1392 aa20■□□□□ 0.79
SSBP1-201ENST00000265304 CDCA8Q53HL2 280 aa19.99■□□□□ 0.79
SSBP1-201ENST00000265304 NUDT16Q96DE0 195 aaKnown RBP19.99■□□□□ 0.79
SSBP1-201ENST00000265304 CCDC61Q9Y6R9 512 aa19.99■□□□□ 0.79
SSBP1-201ENST00000265304 ATAD2Q6PL18 1390 aa19.97■□□□□ 0.79
SSBP1-201ENST00000265304 PLEKHG3A1L390 1219 aa19.97■□□□□ 0.79
SSBP1-201ENST00000265304 C11orf95C9JLR9 678 aaPredicted RBP19.97■□□□□ 0.79
SSBP1-201ENST00000265304 KIF1AQ12756 1690 aa19.96■□□□□ 0.79
SSBP1-201ENST00000265304 CABP2Q9NPB3 220 aa19.95■□□□□ 0.78
SSBP1-201ENST00000265304 NINLQ9Y2I6 1382 aa19.95■□□□□ 0.78
SSBP1-201ENST00000265304 UBAP1LF5GYI3 381 aa19.94■□□□□ 0.78
SSBP1-201ENST00000265304 SRPK2P78362 688 aaKnown RBP19.94■□□□□ 0.78
SSBP1-201ENST00000265304 BRINP3Q76B58 766 aa19.94■□□□□ 0.78
SSBP1-201ENST00000265304 POLR3AO14802 1390 aaPredicted RBP19.94■□□□□ 0.78
SSBP1-201ENST00000265304 ROBO1Q9Y6N7 1651 aa19.94■□□□□ 0.78
SSBP1-201ENST00000265304 NHSL1Q5SYE7 1610 aa19.93■□□□□ 0.78
SSBP1-201ENST00000265304 MYOM1P52179 1685 aa19.92■□□□□ 0.78
SSBP1-201ENST00000265304 ORAI2Q96SN7 254 aa19.92■□□□□ 0.78
SSBP1-201ENST00000265304 AKAP12Q02952 1782 aa19.91■□□□□ 0.78
SSBP1-201ENST00000265304 CPSF1Q10570 1443 aaKnown RBP19.91■□□□□ 0.78
SSBP1-201ENST00000265304 AHDC1Q5TGY3 1603 aaPredicted RBP19.91■□□□□ 0.78
SSBP1-201ENST00000265304 PHF8Q9UPP1 1060 aa19.9■□□□□ 0.78
SSBP1-201ENST00000265304 KIF7Q2M1P5 1343 aa19.89■□□□□ 0.77
SSBP1-201ENST00000265304 ESCO1Q5FWF5 840 aa19.89■□□□□ 0.77
SSBP1-201ENST00000265304 PPIP5K1Q6PFW1 1433 aa19.89■□□□□ 0.77
SSBP1-201ENST00000265304 CCDC7Q96M83 1385 aa19.89■□□□□ 0.77
SSBP1-201ENST00000265304 CD163L1Q9NR16 1453 aa19.89■□□□□ 0.77
SSBP1-201ENST00000265304 BRD4O60885 1362 aaPredicted RBP19.88■□□□□ 0.77
SSBP1-201ENST00000265304 WASHC2AQ641Q2 1341 aa19.88■□□□□ 0.77
SSBP1-201ENST00000265304 NUTM2FA1L443 756 aa19.88■□□□□ 0.77
SSBP1-201ENST00000265304 CABP1Q9NZU7 370 aa19.88■□□□□ 0.77
SSBP1-201ENST00000265304 SOS2Q07890 1332 aaPredicted RBP19.86■□□□□ 0.77
SSBP1-201ENST00000265304 FBXO41Q8TF61 875 aa19.86■□□□□ 0.77
SSBP1-201ENST00000265304 ZNF692Q9BU19 519 aaPredicted RBP19.86■□□□□ 0.77
SSBP1-201ENST00000265304 SSH2Q76I76 1423 aa19.85■□□□□ 0.77
SSBP1-201ENST00000265304 MON2Q7Z3U7 1717 aa19.85■□□□□ 0.77
SSBP1-201ENST00000265304 SLC12A5Q9H2X9 1139 aa19.85■□□□□ 0.77
SSBP1-201ENST00000265304 PXDNQ92626 1479 aa19.85■□□□□ 0.77
SSBP1-201ENST00000265304 ACEP12821 1306 aa19.84■□□□□ 0.77
SSBP1-201ENST00000265304 NPHP3Q7Z494 1330 aa19.84■□□□□ 0.77
SSBP1-201ENST00000265304 TRPM3Q9HCF6 1732 aaPredicted RBP19.84■□□□□ 0.77
SSBP1-201ENST00000265304 ANKRD36BQ8N2N9 1353 aa19.83■□□□□ 0.76
SSBP1-201ENST00000265304 FOXO3O43524 673 aa19.82■□□□□ 0.76
SSBP1-201ENST00000265304 COL16A1Q07092 1604 aaPredicted RBP19.81■□□□□ 0.76
SSBP1-201ENST00000265304 PMFBP1Q8TBY8 1022 aa19.81■□□□□ 0.76
SSBP1-201ENST00000265304 NRKQ7Z2Y5 1582 aa19.8■□□□□ 0.76
SSBP1-201ENST00000265304 USP6P35125 1406 aa19.8■□□□□ 0.76
SSBP1-201ENST00000265304 TERF2IPQ9NYB0 399 aa19.8■□□□□ 0.76
SSBP1-201ENST00000265304 SBNO1A3KN83 1393 aa19.8■□□□□ 0.76
SSBP1-201ENST00000265304 PHLPP1O60346 1717 aa19.79■□□□□ 0.76
SSBP1-201ENST00000265304 PIP4K2BP78356 416 aa19.79■□□□□ 0.76
SSBP1-201ENST00000265304 NGDNQ8NEJ9 315 aaKnown RBP19.79■□□□□ 0.76
SSBP1-201ENST00000265304 A0A1W2PP64 1363 aa19.79■□□□□ 0.76
SSBP1-201ENST00000265304 ALS2Q96Q42 1657 aa19.78■□□□□ 0.76
SSBP1-201ENST00000265304 ZNF316A6NFI3 1004 aaPredicted RBP19.78■□□□□ 0.76
SSBP1-201ENST00000265304 KRT28Q7Z3Y7 464 aa19.77■□□□□ 0.76
SSBP1-201ENST00000265304 TMC1Q8TDI8 760 aa19.77■□□□□ 0.76
SSBP1-201ENST00000265304 PSME1Q06323 249 aa19.76■□□□□ 0.75
SSBP1-201ENST00000265304 EDC4Q6P2E9 1401 aaKnown RBP19.76■□□□□ 0.75
SSBP1-201ENST00000265304 USP54Q70EL1 1684 aa19.75■□□□□ 0.75
SSBP1-201ENST00000265304 KTN1Q86UP2 1357 aaKnown RBP19.75■□□□□ 0.75
SSBP1-201ENST00000265304 PER1O15534 1290 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms