RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 SLC12A5Q9H2X9 1139 aa13.48□□□□□ -0.25
LSG1-201ENST00000265245 POLR3AO14802 1390 aaPredicted RBP13.48□□□□□ -0.25
LSG1-201ENST00000265245 MS4A1P11836 297 aa13.48□□□□□ -0.25
LSG1-201ENST00000265245 PPLO60437 1756 aa13.48□□□□□ -0.25
LSG1-201ENST00000265245 E9PSI1 815 aa13.47□□□□□ -0.25
LSG1-201ENST00000265245 C20orf194Q5TEA3 1177 aa13.47□□□□□ -0.25
LSG1-201ENST00000265245 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
LSG1-201ENST00000265245 PKNOX2Q96KN3 472 aa13.47□□□□□ -0.25
LSG1-201ENST00000265245 SLC52A1Q9NWF4 448 aa13.47□□□□□ -0.25
LSG1-201ENST00000265245 EVC2Q86UK5 1308 aa13.47□□□□□ -0.25
LSG1-201ENST00000265245 ARHGAP31Q2M1Z3 1444 aa13.47□□□□□ -0.25
LSG1-201ENST00000265245 CAMSAP1Q5T5Y3 1602 aa13.47□□□□□ -0.25
LSG1-201ENST00000265245 NUTM2DQ5VT03 806 aaPredicted RBP13.46□□□□□ -0.25
LSG1-201ENST00000265245 CGNL1Q0VF96 1302 aa13.46□□□□□ -0.25
LSG1-201ENST00000265245 CFAP65Q6ZU64 1925 aaKnown RBP13.46□□□□□ -0.25
LSG1-201ENST00000265245 IPO9Q96P70 1041 aaKnown RBP13.46□□□□□ -0.25
LSG1-201ENST00000265245 PUS7Q96PZ0 661 aaKnown RBP13.46□□□□□ -0.25
LSG1-201ENST00000265245 TRMT2AQ8IZ69 625 aaKnown RBP13.46□□□□□ -0.26
LSG1-201ENST00000265245 ZC3H13Q5T200 1668 aaKnown RBP13.45□□□□□ -0.26
LSG1-201ENST00000265245 TNNT2P45379 298 aaPredicted RBP13.45□□□□□ -0.26
LSG1-201ENST00000265245 NKTRP30414 1462 aaKnown RBP13.45□□□□□ -0.26
LSG1-201ENST00000265245 IDI1Q13907 227 aa13.45□□□□□ -0.26
LSG1-201ENST00000265245 IL27Q8NEV9 243 aa13.45□□□□□ -0.26
LSG1-201ENST00000265245 YEATS2Q9ULM3 1422 aa13.44□□□□□ -0.26
LSG1-201ENST00000265245 PDE4AP27815 886 aa13.44□□□□□ -0.26
LSG1-201ENST00000265245 QRICH2Q9H0J4 1663 aa13.44□□□□□ -0.26
LSG1-201ENST00000265245 UBE2Q2Q8WVN8 375 aa13.43□□□□□ -0.26
LSG1-201ENST00000265245 CFAP53Q96M91 514 aa13.43□□□□□ -0.26
LSG1-201ENST00000265245 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
LSG1-201ENST00000265245 NEXMIFQ5QGS0 1516 aa13.42□□□□□ -0.26
LSG1-201ENST00000265245 PIK3C2BO00750 1634 aa13.42□□□□□ -0.26
LSG1-201ENST00000265245 CENPQQ7L2Z9 268 aaPredicted RBP13.42□□□□□ -0.26
LSG1-201ENST00000265245 BACH2Q9BYV9 841 aa13.42□□□□□ -0.26
LSG1-201ENST00000265245 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
LSG1-201ENST00000265245 ANKRD36BQ8N2N9 1353 aa13.41□□□□□ -0.26
LSG1-201ENST00000265245 ZFYVE9O95405 1425 aa13.41□□□□□ -0.26
LSG1-201ENST00000265245 NSD2O96028 1365 aa13.41□□□□□ -0.26
LSG1-201ENST00000265245 RUNDC1Q96C34 613 aa13.41□□□□□ -0.26
LSG1-201ENST00000265245 WWC1Q8IX03 1113 aa13.4□□□□□ -0.26
LSG1-201ENST00000265245 MTHFSP49914 203 aa13.4□□□□□ -0.26
LSG1-201ENST00000265245 NPM2Q86SE8 214 aaKnown RBP13.4□□□□□ -0.26
LSG1-201ENST00000265245 SAFB2Q14151 953 aaKnown RBP eCLIP13.4□□□□□ -0.27
LSG1-201ENST00000265245 KDM2BQ8NHM5 1336 aa13.39□□□□□ -0.27
LSG1-201ENST00000265245 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
LSG1-201ENST00000265245 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
LSG1-201ENST00000265245 STK26Q9P289 416 aa13.39□□□□□ -0.27
LSG1-201ENST00000265245 A0A0U1RQG5 324 aaPredicted RBP13.38□□□□□ -0.27
LSG1-201ENST00000265245 SRPK2P78362 688 aaKnown RBP13.38□□□□□ -0.27
LSG1-201ENST00000265245 NINLQ9Y2I6 1382 aa13.38□□□□□ -0.27
LSG1-201ENST00000265245 BCAR3O75815 825 aa13.38□□□□□ -0.27
LSG1-201ENST00000265245 NEUROD2Q15784 382 aa13.38□□□□□ -0.27
LSG1-201ENST00000265245 DMRT2Q9Y5R5 561 aa13.38□□□□□ -0.27
LSG1-201ENST00000265245 TULP4Q9NRJ4 1543 aa13.38□□□□□ -0.27
LSG1-201ENST00000265245 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
LSG1-201ENST00000265245 TCP11L2Q8N4U5 519 aa13.37□□□□□ -0.27
LSG1-201ENST00000265245 CANXP27824 592 aaKnown RBP13.37□□□□□ -0.27
LSG1-201ENST00000265245 SENP3Q9H4L4 574 aaPredicted RBP13.36□□□□□ -0.27
LSG1-201ENST00000265245 POGKQ9P215 609 aa13.36□□□□□ -0.27
LSG1-201ENST00000265245 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
LSG1-201ENST00000265245 RRP7AQ9Y3A4 280 aaKnown RBP13.36□□□□□ -0.27
LSG1-201ENST00000265245 ARHGEF28Q8N1W1 1705 aaKnown RBP13.35□□□□□ -0.27
LSG1-201ENST00000265245 PDE3AQ14432 1141 aa13.35□□□□□ -0.27
LSG1-201ENST00000265245 ATAD2Q6PL18 1390 aa13.35□□□□□ -0.27
LSG1-201ENST00000265245 SKAP1Q86WV1 359 aa13.35□□□□□ -0.27
LSG1-201ENST00000265245 ADAMTSL3P82987 1691 aa13.34□□□□□ -0.27
LSG1-201ENST00000265245 WDR63Q8IWG1 891 aa13.34□□□□□ -0.27
LSG1-201ENST00000265245 TERF2IPQ9NYB0 399 aa13.34□□□□□ -0.27
LSG1-201ENST00000265245 U2AF1L5P0DN76 240 aaPredicted RBP13.34□□□□□ -0.27
LSG1-201ENST00000265245 U2AF1Q01081 240 aaKnown RBP eCLIP13.34□□□□□ -0.27
LSG1-201ENST00000265245 PRAM1Q96QH2 718 aa13.33□□□□□ -0.27
LSG1-201ENST00000265245 CCDC27Q2M243 656 aa13.33□□□□□ -0.28
LSG1-201ENST00000265245 A0A1W2PP64 1363 aa13.33□□□□□ -0.28
LSG1-201ENST00000265245 ABCC11Q96J66 1382 aa13.33□□□□□ -0.28
LSG1-201ENST00000265245 FBXO31Q5XUX0 539 aaPredicted RBP13.33□□□□□ -0.28
LSG1-201ENST00000265245 PHF23Q9BUL5 403 aaPredicted RBP13.33□□□□□ -0.28
LSG1-201ENST00000265245 MINK1Q8N4C8 1332 aaPredicted RBP13.33□□□□□ -0.28
LSG1-201ENST00000265245 SHPRHQ149N8 1683 aa13.32□□□□□ -0.28
LSG1-201ENST00000265245 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
LSG1-201ENST00000265245 YTHDC2Q9H6S0 1430 aaKnown RBP13.32□□□□□ -0.28
LSG1-201ENST00000265245 IQSEC2Q5JU85 1478 aa13.32□□□□□ -0.28
LSG1-201ENST00000265245 TRHP20396 242 aaPredicted RBP13.31□□□□□ -0.28
LSG1-201ENST00000265245 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
LSG1-201ENST00000265245 PREX1Q8TCU6 1659 aa13.31□□□□□ -0.28
LSG1-201ENST00000265245 TMEM131LA2VDJ0 1609 aa13.31□□□□□ -0.28
LSG1-201ENST00000265245 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
LSG1-201ENST00000265245 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
LSG1-201ENST00000265245 PTPRMP28827 1452 aa13.3□□□□□ -0.28
LSG1-201ENST00000265245 FRAT1Q92837 279 aaPredicted RBP13.3□□□□□ -0.28
LSG1-201ENST00000265245 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
LSG1-201ENST00000265245 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
LSG1-201ENST00000265245 RARSP54136 660 aaKnown RBP13.29□□□□□ -0.28
LSG1-201ENST00000265245 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
LSG1-201ENST00000265245 CLUAP1Q96AJ1 413 aa13.29□□□□□ -0.28
LSG1-201ENST00000265245 CLTCQ00610 1675 aaKnown RBP13.29□□□□□ -0.28
LSG1-201ENST00000265245 RGS3P49796 1198 aa13.29□□□□□ -0.28
LSG1-201ENST00000265245 COG6Q9Y2V7 657 aa13.29□□□□□ -0.28
LSG1-201ENST00000265245 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
LSG1-201ENST00000265245 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
LSG1-201ENST00000265245 PANK1Q8TE04 598 aa13.28□□□□□ -0.28
LSG1-201ENST00000265245 FER1L4A9Z1Z3 1794 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms