RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 RICTORQ6R327 1708 aa12.22□□□□□ -0.45
SSR3-201ENST00000265044 BCORL1Q5H9F3 1711 aa12.22□□□□□ -0.45
SSR3-201ENST00000265044 CCDC136Q96JN2 1154 aa12.22□□□□□ -0.45
SSR3-201ENST00000265044 CAMSAP1Q5T5Y3 1602 aa12.21□□□□□ -0.45
SSR3-201ENST00000265044 MROH1Q8NDA8 1641 aa12.21□□□□□ -0.45
SSR3-201ENST00000265044 LAS1LQ9Y4W2 734 aaKnown RBP12.21□□□□□ -0.45
SSR3-201ENST00000265044 TMEM2Q9UHN6 1383 aa12.2□□□□□ -0.46
SSR3-201ENST00000265044 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
SSR3-201ENST00000265044 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.19□□□□□ -0.46
SSR3-201ENST00000265044 RCAN3Q9UKA8 241 aa12.19□□□□□ -0.46
SSR3-201ENST00000265044 NUTM2GQ5VZR2 741 aa12.19□□□□□ -0.46
SSR3-201ENST00000265044 CDCA7LQ96GN5 454 aa12.19□□□□□ -0.46
SSR3-201ENST00000265044 ZMYM4Q5VZL5 1548 aa12.19□□□□□ -0.46
SSR3-201ENST00000265044 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
SSR3-201ENST00000265044 ADGRB3O60242 1522 aa12.18□□□□□ -0.46
SSR3-201ENST00000265044 MADDQ8WXG6 1647 aa12.18□□□□□ -0.46
SSR3-201ENST00000265044 PDE3BQ13370 1112 aa12.18□□□□□ -0.46
SSR3-201ENST00000265044 NCKAP5LQ9HCH0 1330 aa12.18□□□□□ -0.46
SSR3-201ENST00000265044 PNNQ9H307 717 aaKnown RBP12.18□□□□□ -0.46
SSR3-201ENST00000265044 DIAPH1O60610 1272 aaKnown RBP12.18□□□□□ -0.46
SSR3-201ENST00000265044 PROSER2Q86WR7 435 aaPredicted RBP12.18□□□□□ -0.46
SSR3-201ENST00000265044 AGLP35573 1532 aa12.17□□□□□ -0.46
SSR3-201ENST00000265044 CLTCQ00610 1675 aaKnown RBP12.17□□□□□ -0.46
SSR3-201ENST00000265044 B4GALNT3Q6L9W6 998 aa12.16□□□□□ -0.46
SSR3-201ENST00000265044 AMPHP49418 695 aa12.16□□□□□ -0.46
SSR3-201ENST00000265044 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
SSR3-201ENST00000265044 METP08581 1390 aa12.16□□□□□ -0.46
SSR3-201ENST00000265044 LRPPRCP42704 1394 aaKnown RBP12.16□□□□□ -0.46
SSR3-201ENST00000265044 FBLN1P23142 703 aa12.16□□□□□ -0.46
SSR3-201ENST00000265044 A2ML1A8K2U0 1454 aa12.16□□□□□ -0.46
SSR3-201ENST00000265044 PSME1Q06323 249 aa12.15□□□□□ -0.46
SSR3-201ENST00000265044 ESCO1Q5FWF5 840 aa12.15□□□□□ -0.46
SSR3-201ENST00000265044 NME9Q86XW9 330 aa12.15□□□□□ -0.46
SSR3-201ENST00000265044 FRAT1Q92837 279 aaPredicted RBP12.15□□□□□ -0.46
SSR3-201ENST00000265044 ARHGEF40Q8TER5 1519 aa12.15□□□□□ -0.46
SSR3-201ENST00000265044 PLEKHH1Q9ULM0 1364 aa12.15□□□□□ -0.46
SSR3-201ENST00000265044 ASXL1Q8IXJ9 1541 aa12.15□□□□□ -0.46
SSR3-201ENST00000265044 LTV1Q96GA3 475 aaPredicted RBP12.15□□□□□ -0.46
SSR3-201ENST00000265044 ANKRD36BQ8N2N9 1353 aa12.15□□□□□ -0.46
SSR3-201ENST00000265044 NLRP6P59044 892 aa12.14□□□□□ -0.47
SSR3-201ENST00000265044 FYB1O15117 783 aa12.14□□□□□ -0.47
SSR3-201ENST00000265044 HMOX1P09601 288 aa12.14□□□□□ -0.47
SSR3-201ENST00000265044 KCNA6P17658 529 aa12.14□□□□□ -0.47
SSR3-201ENST00000265044 HAP1P54257 671 aaPredicted RBP12.14□□□□□ -0.47
SSR3-201ENST00000265044 TBX22Q9Y458 520 aa12.14□□□□□ -0.47
SSR3-201ENST00000265044 SBNO2Q9Y2G9 1366 aa12.14□□□□□ -0.47
SSR3-201ENST00000265044 PUS7Q96PZ0 661 aaKnown RBP12.14□□□□□ -0.47
SSR3-201ENST00000265044 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
SSR3-201ENST00000265044 PPP4R2Q9NY27 417 aa12.13□□□□□ -0.47
SSR3-201ENST00000265044 SYNMO15061 1565 aa12.13□□□□□ -0.47
SSR3-201ENST00000265044 RRS1Q15050 365 aaKnown RBP12.13□□□□□ -0.47
SSR3-201ENST00000265044 TCP11L2Q8N4U5 519 aa12.13□□□□□ -0.47
SSR3-201ENST00000265044 ZFYVE9O95405 1425 aa12.12□□□□□ -0.47
SSR3-201ENST00000265044 A0A1W2PP64 1363 aa12.12□□□□□ -0.47
SSR3-201ENST00000265044 ABCC11Q96J66 1382 aa12.12□□□□□ -0.47
SSR3-201ENST00000265044 ABTB2Q8N961 1025 aa12.12□□□□□ -0.47
SSR3-201ENST00000265044 PLIN1O60240 522 aa12.11□□□□□ -0.47
SSR3-201ENST00000265044 HSPA2P54652 639 aa12.11□□□□□ -0.47
SSR3-201ENST00000265044 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
SSR3-201ENST00000265044 ACEP12821 1306 aa12.11□□□□□ -0.47
SSR3-201ENST00000265044 ATF3P18847 181 aa12.11□□□□□ -0.47
SSR3-201ENST00000265044 NINLQ9Y2I6 1382 aa12.11□□□□□ -0.47
SSR3-201ENST00000265044 ZC3H13Q5T200 1668 aaKnown RBP12.1□□□□□ -0.47
SSR3-201ENST00000265044 KIF13AQ9H1H9 1805 aa12.1□□□□□ -0.47
SSR3-201ENST00000265044 PREX1Q8TCU6 1659 aa12.1□□□□□ -0.47
SSR3-201ENST00000265044 XPCQ01831 940 aaPredicted RBP12.1□□□□□ -0.47
SSR3-201ENST00000265044 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
SSR3-201ENST00000265044 MROH2AA6NES4 1674 aa12.09□□□□□ -0.47
SSR3-201ENST00000265044 PPIP5K1Q6PFW1 1433 aa12.09□□□□□ -0.47
SSR3-201ENST00000265044 NEXMIFQ5QGS0 1516 aa12.09□□□□□ -0.47
SSR3-201ENST00000265044 RIPK4P57078 832 aa12.09□□□□□ -0.47
SSR3-201ENST00000265044 EMILIN1Q9Y6C2 1016 aa12.09□□□□□ -0.47
SSR3-201ENST00000265044 PIK3C2BO00750 1634 aa12.09□□□□□ -0.47
SSR3-201ENST00000265044 MYH16Q9H6N6 1097 aa12.08□□□□□ -0.48
SSR3-201ENST00000265044 KDM5AP29375 1690 aaKnown RBP12.08□□□□□ -0.48
SSR3-201ENST00000265044 NLRP1Q9C000 1473 aa12.08□□□□□ -0.48
SSR3-201ENST00000265044 E9PSI1 815 aa12.08□□□□□ -0.48
SSR3-201ENST00000265044 PRKAR2BP31323 418 aa12.07□□□□□ -0.48
SSR3-201ENST00000265044 FOXO3O43524 673 aa12.07□□□□□ -0.48
SSR3-201ENST00000265044 BCL2L13Q9BXK5 485 aa12.07□□□□□ -0.48
SSR3-201ENST00000265044 PLEKHG1Q9ULL1 1385 aa12.06□□□□□ -0.48
SSR3-201ENST00000265044 ALKQ9UM73 1620 aa12.06□□□□□ -0.48
SSR3-201ENST00000265044 NSD2O96028 1365 aa12.06□□□□□ -0.48
SSR3-201ENST00000265044 NPC1L1Q9UHC9 1359 aa12.06□□□□□ -0.48
SSR3-201ENST00000265044 RRP1P56182 461 aaKnown RBP12.06□□□□□ -0.48
SSR3-201ENST00000265044 RTF1Q92541 710 aaKnown RBP12.06□□□□□ -0.48
SSR3-201ENST00000265044 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
SSR3-201ENST00000265044 FTSJ3Q8IY81 847 aaKnown RBP12.05□□□□□ -0.48
SSR3-201ENST00000265044 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
SSR3-201ENST00000265044 NRXN1Q9ULB1 1477 aa12.05□□□□□ -0.48
SSR3-201ENST00000265044 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
SSR3-201ENST00000265044 LAMC1P11047 1609 aa12.04□□□□□ -0.48
SSR3-201ENST00000265044 ELL2O00472 640 aaPredicted RBP12.04□□□□□ -0.48
SSR3-201ENST00000265044 SIGLEC1Q9BZZ2 1709 aa12.04□□□□□ -0.48
SSR3-201ENST00000265044 TTC21BQ7Z4L5 1316 aa12.04□□□□□ -0.48
SSR3-201ENST00000265044 SETBP1Q9Y6X0 1596 aa12.03□□□□□ -0.48
SSR3-201ENST00000265044 ERICH6BQ5W0A0 696 aa12.03□□□□□ -0.48
SSR3-201ENST00000265044 CLUAP1Q96AJ1 413 aa12.03□□□□□ -0.48
SSR3-201ENST00000265044 SIRT1Q96EB6 747 aa12.03□□□□□ -0.48
SSR3-201ENST00000265044 TMEM131LA2VDJ0 1609 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms