RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TSPY26PQ9H489 355 aa14.17□□□□□ -0.14
DNMT3A-201ENST00000264709 ADAMTS8Q9UP79 889 aa14.17□□□□□ -0.14
DNMT3A-201ENST00000264709 K7ELQ4 463 aaPredicted RBP14.17□□□□□ -0.14
DNMT3A-201ENST00000264709 UGGT2Q9NYU1 1516 aa14.17□□□□□ -0.14
DNMT3A-201ENST00000264709 PRIMPOLQ96LW4 560 aa14.16□□□□□ -0.14
DNMT3A-201ENST00000264709 ERCC6Q03468 1493 aa14.16□□□□□ -0.14
DNMT3A-201ENST00000264709 ZKSCAN1P17029 563 aaPredicted RBP14.16□□□□□ -0.14
DNMT3A-201ENST00000264709 UQCRHLA0A096LP55 91 aa14.15□□□□□ -0.14
DNMT3A-201ENST00000264709 UQCRHP07919 91 aa14.15□□□□□ -0.14
DNMT3A-201ENST00000264709 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.15□□□□□ -0.14
DNMT3A-201ENST00000264709 RNF20Q5VTR2 975 aa14.15□□□□□ -0.14
DNMT3A-201ENST00000264709 SASS6Q6UVJ0 657 aa14.14□□□□□ -0.15
DNMT3A-201ENST00000264709 TRIM6-TRIM34B2RNG4 842 aa14.14□□□□□ -0.15
DNMT3A-201ENST00000264709 CAVIN2O95810 425 aa14.14□□□□□ -0.15
DNMT3A-201ENST00000264709 MCTP1Q6DN14 999 aa14.14□□□□□ -0.15
DNMT3A-201ENST00000264709 CCDC70Q6NSX1 233 aa14.14□□□□□ -0.15
DNMT3A-201ENST00000264709 TULP1O00294 542 aaPredicted RBP14.14□□□□□ -0.15
DNMT3A-201ENST00000264709 PPP2R1AP30153 589 aa14.14□□□□□ -0.15
DNMT3A-201ENST00000264709 MVPQ14764 893 aaKnown RBP14.13□□□□□ -0.15
DNMT3A-201ENST00000264709 NUP160Q12769 1436 aa14.13□□□□□ -0.15
DNMT3A-201ENST00000264709 GNL2Q13823 731 aaKnown RBP14.12□□□□□ -0.15
DNMT3A-201ENST00000264709 GNAI1P63096 354 aa14.12□□□□□ -0.15
DNMT3A-201ENST00000264709 PANK1Q8TE04 598 aa14.12□□□□□ -0.15
DNMT3A-201ENST00000264709 PARD3Q8TEW0 1356 aa14.12□□□□□ -0.15
DNMT3A-201ENST00000264709 ABCC11Q96J66 1382 aa14.12□□□□□ -0.15
DNMT3A-201ENST00000264709 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
DNMT3A-201ENST00000264709 TBC1D32Q96NH3 1257 aa14.12□□□□□ -0.15
DNMT3A-201ENST00000264709 ZMYND15Q9H091 742 aa14.12□□□□□ -0.15
DNMT3A-201ENST00000264709 IFT57Q9NWB7 429 aa14.12□□□□□ -0.15
DNMT3A-201ENST00000264709 WDR33Q9C0J8 1336 aaKnown RBP14.11□□□□□ -0.15
DNMT3A-201ENST00000264709 GRIN2BQ13224 1484 aa14.11□□□□□ -0.15
DNMT3A-201ENST00000264709 KLHL40Q2TBA0 621 aa14.11□□□□□ -0.15
DNMT3A-201ENST00000264709 HSP90B2PQ58FF3 399 aa14.11□□□□□ -0.15
DNMT3A-201ENST00000264709 NOC3LQ8WTT2 800 aaKnown RBP14.11□□□□□ -0.15
DNMT3A-201ENST00000264709 CCDC192P0DO97 292 aa14.11□□□□□ -0.15
DNMT3A-201ENST00000264709 TPM1P09493 284 aa14.11□□□□□ -0.15
DNMT3A-201ENST00000264709 TCOF1Q13428 1488 aaKnown RBP14.1□□□□□ -0.15
DNMT3A-201ENST00000264709 ATAD2Q6PL18 1390 aa14.1□□□□□ -0.15
DNMT3A-201ENST00000264709 A0A0G2JS52 829 aa14.1□□□□□ -0.15
DNMT3A-201ENST00000264709 CDCA7LQ96GN5 454 aa14.1□□□□□ -0.15
DNMT3A-201ENST00000264709 SLFN5Q08AF3 891 aa14.09□□□□□ -0.15
DNMT3A-201ENST00000264709 HOOK1Q9UJC3 728 aaKnown RBP14.09□□□□□ -0.15
DNMT3A-201ENST00000264709 DNMT1P26358 1616 aaKnown RBP14.09□□□□□ -0.15
DNMT3A-201ENST00000264709 NBPF8Q3BBV2 869 aa14.09□□□□□ -0.15
DNMT3A-201ENST00000264709 PDZRN3Q9UPQ7 1066 aa14.09□□□□□ -0.15
DNMT3A-201ENST00000264709 NPHP1O15259 732 aa14.09□□□□□ -0.15
DNMT3A-201ENST00000264709 SYNJ2O15056 1496 aa14.09□□□□□ -0.15
DNMT3A-201ENST00000264709 AK7Q96M32 723 aa14.08□□□□□ -0.15
DNMT3A-201ENST00000264709 LRRFIP1Q32MZ4 808 aaKnown RBP14.08□□□□□ -0.16
DNMT3A-201ENST00000264709 TPRNQ4KMQ1 711 aa14.08□□□□□ -0.16
DNMT3A-201ENST00000264709 HSP90AB4PQ58FF6 505 aa14.08□□□□□ -0.16
DNMT3A-201ENST00000264709 CCDC112Q8NEF3 446 aa14.07□□□□□ -0.16
DNMT3A-201ENST00000264709 TEX14Q8IWB6 1497 aa14.07□□□□□ -0.16
DNMT3A-201ENST00000264709 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
DNMT3A-201ENST00000264709 ATF7IPQ6VMQ6 1270 aa14.06□□□□□ -0.16
DNMT3A-201ENST00000264709 CALCOCO1Q9P1Z2 691 aa14.06□□□□□ -0.16
DNMT3A-201ENST00000264709 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
DNMT3A-201ENST00000264709 ASXL1Q8IXJ9 1541 aa14.06□□□□□ -0.16
DNMT3A-201ENST00000264709 TBC1D2Q9BYX2 928 aa14.06□□□□□ -0.16
DNMT3A-201ENST00000264709 ERCC4Q92889 916 aaPredicted RBP14.05□□□□□ -0.16
DNMT3A-201ENST00000264709 NSD2O96028 1365 aa14.05□□□□□ -0.16
DNMT3A-201ENST00000264709 SMC3Q9UQE7 1217 aa14.05□□□□□ -0.16
DNMT3A-201ENST00000264709 H3BQV1 296 aa14.05□□□□□ -0.16
DNMT3A-201ENST00000264709 IFFO2Q5TF58 517 aa14.05□□□□□ -0.16
DNMT3A-201ENST00000264709 GTPBP4Q9BZE4 634 aaKnown RBP14.05□□□□□ -0.16
DNMT3A-201ENST00000264709 KIF20AO95235 890 aa14.05□□□□□ -0.16
DNMT3A-201ENST00000264709 BCL2L13Q9BXK5 485 aa14.05□□□□□ -0.16
DNMT3A-201ENST00000264709 BMP2KLQ5H9B9 411 aa14.05□□□□□ -0.16
DNMT3A-201ENST00000264709 MNS1Q8NEH6 495 aa14.05□□□□□ -0.16
DNMT3A-201ENST00000264709 LNPKQ9C0E8 428 aa14.04□□□□□ -0.16
DNMT3A-201ENST00000264709 XRCC6P12956 609 aaKnown RBP eCLIP14.04□□□□□ -0.16
DNMT3A-201ENST00000264709 TCP11L2Q8N4U5 519 aa14.04□□□□□ -0.16
DNMT3A-201ENST00000264709 FAM135AQ9P2D6 1515 aa14.04□□□□□ -0.16
DNMT3A-201ENST00000264709 VGFO15240 615 aaPredicted RBP14.04□□□□□ -0.16
DNMT3A-201ENST00000264709 CCDC73Q6ZRK6 1079 aa14.04□□□□□ -0.16
DNMT3A-201ENST00000264709 NEMFO60524 1076 aa14.04□□□□□ -0.16
DNMT3A-201ENST00000264709 USP8P40818 1118 aa14.04□□□□□ -0.16
DNMT3A-201ENST00000264709 CCDC184Q52MB2 194 aa14.04□□□□□ -0.16
DNMT3A-201ENST00000264709 SHANK2Q9UPX8 1470 aa14.03□□□□□ -0.16
DNMT3A-201ENST00000264709 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
DNMT3A-201ENST00000264709 BICRAQ9NZM4 1560 aa14.03□□□□□ -0.16
DNMT3A-201ENST00000264709 ERC2O15083 957 aa14.03□□□□□ -0.16
DNMT3A-201ENST00000264709 AEBP1Q8IUX7 1158 aa14.03□□□□□ -0.16
DNMT3A-201ENST00000264709 SNX21Q969T3 373 aa14.03□□□□□ -0.16
DNMT3A-201ENST00000264709 SRCIN1Q9C0H9 1055 aa14.03□□□□□ -0.16
DNMT3A-201ENST00000264709 RBM25P49756 843 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-201ENST00000264709 RRP7AQ9Y3A4 280 aaKnown RBP14.02□□□□□ -0.16
DNMT3A-201ENST00000264709 PSMA5P28066 241 aa14.02□□□□□ -0.17
DNMT3A-201ENST00000264709 HOMER1Q86YM7 354 aa14.02□□□□□ -0.17
DNMT3A-201ENST00000264709 ARHGAP5Q13017 1502 aa14.02□□□□□ -0.17
DNMT3A-201ENST00000264709 LAMC3Q9Y6N6 1575 aa14.02□□□□□ -0.17
DNMT3A-201ENST00000264709 APBB1O00213 710 aa14.02□□□□□ -0.17
DNMT3A-201ENST00000264709 BLMP54132 1417 aaPredicted RBP14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 DIAPH1O60610 1272 aaKnown RBP14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 OFD1O75665 1012 aa14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 IPO7O95373 1038 aaKnown RBP14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 TSR1Q2NL82 804 aaKnown RBP14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 UHRF1BP1Q6BDS2 1440 aa14.01□□□□□ -0.17
DNMT3A-201ENST00000264709 TRIM5Q9C035 493 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms