RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 PCF11O94913 1555 aaKnown RBP18.31■□□□□ 0.52
CASC3-201ENST00000264645 CARMIL2Q6F5E8 1435 aa18.3■□□□□ 0.52
CASC3-201ENST00000264645 FIBPO43427 364 aa18.3■□□□□ 0.52
CASC3-201ENST00000264645 EFCAB2Q5VUJ9 269 aa18.3■□□□□ 0.52
CASC3-201ENST00000264645 SMC3Q9UQE7 1217 aa18.3■□□□□ 0.52
CASC3-201ENST00000264645 PCDHB15Q9Y5E8 787 aa18.3■□□□□ 0.52
CASC3-201ENST00000264645 CWC22Q9HCG8 908 aaKnown RBP18.3■□□□□ 0.52
CASC3-201ENST00000264645 CCDC66A2RUB6 948 aa18.3■□□□□ 0.52
CASC3-201ENST00000264645 GNL2Q13823 731 aaKnown RBP18.29■□□□□ 0.52
CASC3-201ENST00000264645 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
CASC3-201ENST00000264645 DIAPH1O60610 1272 aaKnown RBP18.29■□□□□ 0.52
CASC3-201ENST00000264645 HSP90B1P14625 803 aaKnown RBP18.29■□□□□ 0.52
CASC3-201ENST00000264645 PTPN23Q9H3S7 1636 aa18.29■□□□□ 0.52
CASC3-201ENST00000264645 ERBINQ96RT1 1412 aa18.28■□□□□ 0.52
CASC3-201ENST00000264645 LMOD3Q0VAK6 560 aa18.28■□□□□ 0.52
CASC3-201ENST00000264645 BICD2Q8TD16 824 aa18.28■□□□□ 0.52
CASC3-201ENST00000264645 GCC1Q96CN9 775 aa18.28■□□□□ 0.52
CASC3-201ENST00000264645 TRIM5Q9C035 493 aa18.28■□□□□ 0.52
CASC3-201ENST00000264645 BAG4O95429 457 aaKnown RBP18.27■□□□□ 0.52
CASC3-201ENST00000264645 TPD52L1Q16890 204 aaPredicted RBP18.27■□□□□ 0.52
CASC3-201ENST00000264645 WDR63Q8IWG1 891 aa18.27■□□□□ 0.52
CASC3-201ENST00000264645 GGNBP2Q9H3C7 697 aa18.27■□□□□ 0.52
CASC3-201ENST00000264645 TMEM57Q8N5G2 664 aa18.27■□□□□ 0.52
CASC3-201ENST00000264645 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
CASC3-201ENST00000264645 TPM4P67936 248 aa18.26■□□□□ 0.51
CASC3-201ENST00000264645 HOMER1Q86YM7 354 aa18.26■□□□□ 0.51
CASC3-201ENST00000264645 DHX29Q7Z478 1369 aaKnown RBP18.26■□□□□ 0.51
CASC3-201ENST00000264645 DYNC1I1O14576 645 aa18.26■□□□□ 0.51
CASC3-201ENST00000264645 CFAP70Q5T0N1 1121 aa18.26■□□□□ 0.51
CASC3-201ENST00000264645 DAPK1P53355 1430 aa18.26■□□□□ 0.51
CASC3-201ENST00000264645 KLHL40Q2TBA0 621 aa18.25■□□□□ 0.51
CASC3-201ENST00000264645 TEX35Q5T0J7 233 aa18.25■□□□□ 0.51
CASC3-201ENST00000264645 HMOX1P09601 288 aa18.25■□□□□ 0.51
CASC3-201ENST00000264645 RBM27Q9P2N5 1060 aaKnown RBP18.25■□□□□ 0.51
CASC3-201ENST00000264645 SPDYE4A6NLX3 237 aa18.25■□□□□ 0.51
CASC3-201ENST00000264645 OFD1O75665 1012 aa18.25■□□□□ 0.51
CASC3-201ENST00000264645 FBXW7Q969H0 707 aa18.25■□□□□ 0.51
CASC3-201ENST00000264645 JPH4Q96JJ6 628 aa18.25■□□□□ 0.51
CASC3-201ENST00000264645 SLC12A5Q9H2X9 1139 aa18.25■□□□□ 0.51
CASC3-201ENST00000264645 CGNQ9P2M7 1197 aaKnown RBP18.25■□□□□ 0.51
CASC3-201ENST00000264645 EHBP1L1Q8N3D4 1523 aa18.24■□□□□ 0.51
CASC3-201ENST00000264645 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
CASC3-201ENST00000264645 H3BQV1 296 aa18.24■□□□□ 0.51
CASC3-201ENST00000264645 IFFO2Q5TF58 517 aa18.24■□□□□ 0.51
CASC3-201ENST00000264645 PLEKHH2Q8IVE3 1493 aa18.24■□□□□ 0.51
CASC3-201ENST00000264645 KDM2BQ8NHM5 1336 aa18.23■□□□□ 0.51
CASC3-201ENST00000264645 PPP4R3BQ5MIZ7 849 aa18.23■□□□□ 0.51
CASC3-201ENST00000264645 SF3A1Q15459 793 aaKnown RBP18.23■□□□□ 0.51
CASC3-201ENST00000264645 TPM3P06753 285 aa18.22■□□□□ 0.51
CASC3-201ENST00000264645 GOLGA6L1Q8N7Z2 621 aa18.22■□□□□ 0.51
CASC3-201ENST00000264645 EFCAB5A4FU69 1503 aa18.22■□□□□ 0.51
CASC3-201ENST00000264645 ERICH4A6NGS2 130 aa18.22■□□□□ 0.51
CASC3-201ENST00000264645 CCDC112Q8NEF3 446 aa18.22■□□□□ 0.51
CASC3-201ENST00000264645 USP25Q9UHP3 1055 aa18.22■□□□□ 0.51
CASC3-201ENST00000264645 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.21■□□□□ 0.51
CASC3-201ENST00000264645 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
CASC3-201ENST00000264645 EVC2Q86UK5 1308 aa18.21■□□□□ 0.51
CASC3-201ENST00000264645 ZSCAN23Q3MJ62 389 aa18.2■□□□□ 0.5
CASC3-201ENST00000264645 GPS2Q13227 327 aa18.2■□□□□ 0.5
CASC3-201ENST00000264645 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
CASC3-201ENST00000264645 MCM2P49736 904 aa18.19■□□□□ 0.5
CASC3-201ENST00000264645 GNAI1P63096 354 aa18.19■□□□□ 0.5
CASC3-201ENST00000264645 FAM184AQ8NB25 1140 aa18.19■□□□□ 0.5
CASC3-201ENST00000264645 GAPVD1Q14C86 1478 aa18.19■□□□□ 0.5
CASC3-201ENST00000264645 RBM42Q9BTD8 480 aaKnown RBP18.19■□□□□ 0.5
CASC3-201ENST00000264645 LETM1O95202 739 aaPredicted RBP18.18■□□□□ 0.5
CASC3-201ENST00000264645 TMEM132EQ6IEE7 984 aa18.18■□□□□ 0.5
CASC3-201ENST00000264645 ZNF830Q96NB3 372 aaPredicted RBP18.18■□□□□ 0.5
CASC3-201ENST00000264645 IGSF3O75054 1194 aa18.18■□□□□ 0.5
CASC3-201ENST00000264645 ZKSCAN5Q9Y2L8 839 aa18.18■□□□□ 0.5
CASC3-201ENST00000264645 ERC2O15083 957 aa18.17■□□□□ 0.5
CASC3-201ENST00000264645 ZKSCAN1P17029 563 aaPredicted RBP18.17■□□□□ 0.5
CASC3-201ENST00000264645 MNS1Q8NEH6 495 aa18.17■□□□□ 0.5
CASC3-201ENST00000264645 NECTIN2Q92692 538 aa18.17■□□□□ 0.5
CASC3-201ENST00000264645 GDPD2Q9HCC8 539 aa18.17■□□□□ 0.5
CASC3-201ENST00000264645 BBXQ8WY36 941 aaPredicted RBP18.17■□□□□ 0.5
CASC3-201ENST00000264645 GPATCH3Q96I76 525 aa18.17■□□□□ 0.5
CASC3-201ENST00000264645 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
CASC3-201ENST00000264645 MINK1Q8N4C8 1332 aaPredicted RBP18.17■□□□□ 0.5
CASC3-201ENST00000264645 MCM5P33992 734 aa18.17■□□□□ 0.5
CASC3-201ENST00000264645 ROCK1Q13464 1354 aa18.17■□□□□ 0.5
CASC3-201ENST00000264645 TRIM27P14373 513 aa18.17■□□□□ 0.5
CASC3-201ENST00000264645 SUPT6HQ7KZ85 1726 aaKnown RBP18.16■□□□□ 0.5
CASC3-201ENST00000264645 PRIM1P49642 420 aaKnown RBP18.16■□□□□ 0.5
CASC3-201ENST00000264645 ARGLU1Q9NWB6 273 aaPredicted RBP18.16■□□□□ 0.5
CASC3-201ENST00000264645 GORABQ5T7V8 394 aa18.16■□□□□ 0.5
CASC3-201ENST00000264645 WDR33Q9C0J8 1336 aaKnown RBP18.16■□□□□ 0.5
CASC3-201ENST00000264645 TBC1D9Q6ZT07 1266 aa18.15■□□□□ 0.5
CASC3-201ENST00000264645 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
CASC3-201ENST00000264645 CT47B1P0C2W7 299 aaPredicted RBP18.15■□□□□ 0.5
CASC3-201ENST00000264645 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
CASC3-201ENST00000264645 TRERF1Q96PN7 1200 aa18.15■□□□□ 0.5
CASC3-201ENST00000264645 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.15■□□□□ 0.5
CASC3-201ENST00000264645 PARD3Q8TEW0 1356 aa18.15■□□□□ 0.5
CASC3-201ENST00000264645 CCDC192P0DO97 292 aa18.14■□□□□ 0.5
CASC3-201ENST00000264645 RLBP1P12271 317 aa18.14■□□□□ 0.5
CASC3-201ENST00000264645 CABP2Q9NPB3 220 aa18.14■□□□□ 0.5
CASC3-201ENST00000264645 PRKAR2BP31323 418 aa18.14■□□□□ 0.49
CASC3-201ENST00000264645 UPF3BQ9BZI7 483 aaKnown RBP18.14■□□□□ 0.49
CASC3-201ENST00000264645 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms