RNA–Protein interactions for RNA: ENST00000264254.10

PDCL3-201, Transcript of phosducin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCL3, Length 1,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3-201ENST00000264254 CADPS2Q86UW7 1296 aa24.27■■□□□ 1.48
PDCL3-201ENST00000264254 DCCP43146 1447 aa24.26■■□□□ 1.47
PDCL3-201ENST00000264254 ATF3P18847 181 aa24.26■■□□□ 1.47
PDCL3-201ENST00000264254 TOM1O60784 492 aa24.25■■□□□ 1.47
PDCL3-201ENST00000264254 PLEKHH1Q9ULM0 1364 aa24.24■■□□□ 1.47
PDCL3-201ENST00000264254 SAFB2Q14151 953 aaKnown RBP eCLIP24.22■■□□□ 1.47
PDCL3-201ENST00000264254 USP47Q96K76 1375 aa24.2■■□□□ 1.46
PDCL3-201ENST00000264254 SBNO2Q9Y2G9 1366 aa24.18■■□□□ 1.46
PDCL3-201ENST00000264254 UBAP1LF5GYI3 381 aa24.17■■□□□ 1.46
PDCL3-201ENST00000264254 EIF4G2P78344 907 aaKnown RBP eCLIP24.17■■□□□ 1.46
PDCL3-201ENST00000264254 MINK1Q8N4C8 1332 aaPredicted RBP24.17■■□□□ 1.46
PDCL3-201ENST00000264254 ARHGEF28Q8N1W1 1705 aaKnown RBP24.16■■□□□ 1.46
PDCL3-201ENST00000264254 SLAIN2Q9P270 581 aa24.15■■□□□ 1.46
PDCL3-201ENST00000264254 ST20-MTHFSA0A0A6YYL1 179 aa24.14■■□□□ 1.46
PDCL3-201ENST00000264254 WASLO00401 505 aaPredicted RBP24.14■■□□□ 1.46
PDCL3-201ENST00000264254 CDC42BPGQ6DT37 1551 aa24.14■■□□□ 1.46
PDCL3-201ENST00000264254 HIRIP3Q9BW71 556 aaPredicted RBP24.13■■□□□ 1.45
PDCL3-201ENST00000264254 EVC2Q86UK5 1308 aa24.13■■□□□ 1.45
PDCL3-201ENST00000264254 ADGRB2O60241 1585 aa24.12■■□□□ 1.45
PDCL3-201ENST00000264254 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.1■■□□□ 1.45
PDCL3-201ENST00000264254 XIRP1Q702N8 1843 aaKnown RBP24.1■■□□□ 1.45
PDCL3-201ENST00000264254 NALCNQ8IZF0 1738 aa24.1■■□□□ 1.45
PDCL3-201ENST00000264254 CDK19Q9BWU1 502 aa24.09■■□□□ 1.45
PDCL3-201ENST00000264254 MST1RQ04912 1400 aa24.08■■□□□ 1.45
PDCL3-201ENST00000264254 ANKARQ7Z5J8 1434 aa24.08■■□□□ 1.45
PDCL3-201ENST00000264254 TESK2Q96S53 571 aa24.08■■□□□ 1.44
PDCL3-201ENST00000264254 TMF1P82094 1093 aa24.07■■□□□ 1.44
PDCL3-201ENST00000264254 FBXO41Q8TF61 875 aa24.07■■□□□ 1.44
PDCL3-201ENST00000264254 PUS7Q96PZ0 661 aaKnown RBP24.07■■□□□ 1.44
PDCL3-201ENST00000264254 HSPA5P11021 654 aaKnown RBP24.06■■□□□ 1.44
PDCL3-201ENST00000264254 SRPK2P78362 688 aaKnown RBP24.06■■□□□ 1.44
PDCL3-201ENST00000264254 CDCA8Q53HL2 280 aa24.06■■□□□ 1.44
PDCL3-201ENST00000264254 C1orf167Q5SNV9 1468 aa24.06■■□□□ 1.44
PDCL3-201ENST00000264254 PIP4K2BP78356 416 aa24.04■■□□□ 1.44
PDCL3-201ENST00000264254 QRICH2Q9H0J4 1663 aa24.03■■□□□ 1.44
PDCL3-201ENST00000264254 TULP4Q9NRJ4 1543 aa24.02■■□□□ 1.44
PDCL3-201ENST00000264254 SCAF1Q9H7N4 1312 aaKnown RBP24.02■■□□□ 1.44
PDCL3-201ENST00000264254 CCDC61Q9Y6R9 512 aa24.02■■□□□ 1.44
PDCL3-201ENST00000264254 NUTM2FA1L443 756 aa24.01■■□□□ 1.43
PDCL3-201ENST00000264254 ESCO1Q5FWF5 840 aa24.01■■□□□ 1.43
PDCL3-201ENST00000264254 NUDT16Q96DE0 195 aaKnown RBP24.01■■□□□ 1.43
PDCL3-201ENST00000264254 ATAD2Q6PL18 1390 aa24■■□□□ 1.43
PDCL3-201ENST00000264254 BRINP3Q76B58 766 aa24■■□□□ 1.43
PDCL3-201ENST00000264254 CABP2Q9NPB3 220 aa23.99■■□□□ 1.43
PDCL3-201ENST00000264254 ORAI2Q96SN7 254 aa23.97■■□□□ 1.43
PDCL3-201ENST00000264254 PHF8Q9UPP1 1060 aa23.97■■□□□ 1.43
PDCL3-201ENST00000264254 FMN2Q9NZ56 1722 aa23.97■■□□□ 1.43
PDCL3-201ENST00000264254 PRR36Q9H6K5 1346 aa23.95■■□□□ 1.43
PDCL3-201ENST00000264254 ATP7BP35670 1465 aa23.95■■□□□ 1.42
PDCL3-201ENST00000264254 PLEKHG3A1L390 1219 aa23.93■■□□□ 1.42
PDCL3-201ENST00000264254 NPHP3Q7Z494 1330 aa23.93■■□□□ 1.42
PDCL3-201ENST00000264254 NINLQ9Y2I6 1382 aa23.92■■□□□ 1.42
PDCL3-201ENST00000264254 DISP3Q9P2K9 1392 aa23.9■■□□□ 1.42
PDCL3-201ENST00000264254 NGDNQ8NEJ9 315 aaKnown RBP23.9■■□□□ 1.42
PDCL3-201ENST00000264254 PPIP5K1Q6PFW1 1433 aa23.89■■□□□ 1.42
PDCL3-201ENST00000264254 FOXO3O43524 673 aa23.88■■□□□ 1.41
PDCL3-201ENST00000264254 CABP1Q9NZU7 370 aa23.88■■□□□ 1.41
PDCL3-201ENST00000264254 ROBO1Q9Y6N7 1651 aa23.88■■□□□ 1.41
PDCL3-201ENST00000264254 PSME1Q06323 249 aa23.87■■□□□ 1.41
PDCL3-201ENST00000264254 PMFBP1Q8TBY8 1022 aa23.87■■□□□ 1.41
PDCL3-201ENST00000264254 USP32Q8NFA0 1604 aa23.87■■□□□ 1.41
PDCL3-201ENST00000264254 ZNF692Q9BU19 519 aaPredicted RBP23.86■■□□□ 1.41
PDCL3-201ENST00000264254 KIF1AQ12756 1690 aa23.86■■□□□ 1.41
PDCL3-201ENST00000264254 TMC1Q8TDI8 760 aa23.85■■□□□ 1.41
PDCL3-201ENST00000264254 POLR3AO14802 1390 aaPredicted RBP23.85■■□□□ 1.41
PDCL3-201ENST00000264254 TERF2IPQ9NYB0 399 aa23.84■■□□□ 1.41
PDCL3-201ENST00000264254 ACEP12821 1306 aa23.84■■□□□ 1.41
PDCL3-201ENST00000264254 AHDC1Q5TGY3 1603 aaPredicted RBP23.84■■□□□ 1.41
PDCL3-201ENST00000264254 POTEDQ86YR6 584 aa23.84■■□□□ 1.41
PDCL3-201ENST00000264254 SOS2Q07890 1332 aaPredicted RBP23.83■■□□□ 1.41
PDCL3-201ENST00000264254 BRD4O60885 1362 aaPredicted RBP23.83■■□□□ 1.41
PDCL3-201ENST00000264254 KRT28Q7Z3Y7 464 aa23.83■■□□□ 1.4
PDCL3-201ENST00000264254 HDGFL2Q7Z4V5 671 aaPredicted RBP23.83■■□□□ 1.4
PDCL3-201ENST00000264254 LRRC59Q96AG4 307 aaKnown RBP23.83■■□□□ 1.4
PDCL3-201ENST00000264254 ITSN1Q15811 1721 aa23.82■■□□□ 1.4
PDCL3-201ENST00000264254 HSPA1LP34931 641 aa23.81■■□□□ 1.4
PDCL3-201ENST00000264254 SLC12A5Q9H2X9 1139 aa23.81■■□□□ 1.4
PDCL3-201ENST00000264254 POLR3GLQ9BT43 218 aa23.8■■□□□ 1.4
PDCL3-201ENST00000264254 TOPAZ1Q8N9V7 1692 aa23.79■■□□□ 1.4
PDCL3-201ENST00000264254 SBNO1A3KN83 1393 aa23.79■■□□□ 1.4
PDCL3-201ENST00000264254 KIF7Q2M1P5 1343 aa23.78■■□□□ 1.4
PDCL3-201ENST00000264254 C11orf95C9JLR9 678 aaPredicted RBP23.78■■□□□ 1.4
PDCL3-201ENST00000264254 DDX17Q92841 729 aaKnown RBP23.78■■□□□ 1.4
PDCL3-201ENST00000264254 PXDNQ92626 1479 aa23.76■■□□□ 1.39
PDCL3-201ENST00000264254 CPSF1Q10570 1443 aaKnown RBP23.76■■□□□ 1.39
PDCL3-201ENST00000264254 NHSL1Q5SYE7 1610 aa23.76■■□□□ 1.39
PDCL3-201ENST00000264254 ANKRD36BQ8N2N9 1353 aa23.75■■□□□ 1.39
PDCL3-201ENST00000264254 KTN1Q86UP2 1357 aaKnown RBP23.74■■□□□ 1.39
PDCL3-201ENST00000264254 CCDC7Q96M83 1385 aa23.74■■□□□ 1.39
PDCL3-201ENST00000264254 XPCQ01831 940 aaPredicted RBP23.74■■□□□ 1.39
PDCL3-201ENST00000264254 ILDR1Q86SU0 546 aaPredicted RBP23.74■■□□□ 1.39
PDCL3-201ENST00000264254 USP6P35125 1406 aa23.74■■□□□ 1.39
PDCL3-201ENST00000264254 SPATA31A3Q5VYP0 1347 aa23.73■■□□□ 1.39
PDCL3-201ENST00000264254 ARHGEF10O15013 1369 aa23.73■■□□□ 1.39
PDCL3-201ENST00000264254 JCADQ9P266 1359 aa23.73■■□□□ 1.39
PDCL3-201ENST00000264254 PAK3O75914 559 aaPredicted RBP23.72■■□□□ 1.39
PDCL3-201ENST00000264254 RGPD8O14715 1765 aaPredicted RBP23.72■■□□□ 1.39
PDCL3-201ENST00000264254 WASHC2AQ641Q2 1341 aa23.71■■□□□ 1.39
PDCL3-201ENST00000264254 A0A1W2PP64 1363 aa23.71■■□□□ 1.39
PDCL3-201ENST00000264254 PHLPP1O60346 1717 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms