RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 FKBP5Q13451 457 aaPredicted RBP21.06■□□□□ 0.96
NOTCH3-201ENST00000263388 MNS1Q8NEH6 495 aa21.06■□□□□ 0.96
NOTCH3-201ENST00000263388 CCDC43Q96MW1 224 aaKnown RBP21.06■□□□□ 0.96
NOTCH3-201ENST00000263388 KRI1Q8N9T8 703 aaKnown RBP21.05■□□□□ 0.96
NOTCH3-201ENST00000263388 MYO6Q9UM54 1294 aa21.05■□□□□ 0.96
NOTCH3-201ENST00000263388 PSMA5P28066 241 aa21.05■□□□□ 0.96
NOTCH3-201ENST00000263388 RDXP35241 583 aaKnown RBP21.05■□□□□ 0.96
NOTCH3-201ENST00000263388 RRBP1Q9P2E9 1410 aaKnown RBP21.05■□□□□ 0.96
NOTCH3-201ENST00000263388 RALYLQ86SE5 291 aaKnown RBP21.05■□□□□ 0.96
NOTCH3-201ENST00000263388 GNAI1P63096 354 aa21.05■□□□□ 0.96
NOTCH3-201ENST00000263388 CADPSQ9ULU8 1353 aa21.05■□□□□ 0.96
NOTCH3-201ENST00000263388 STAC3Q96MF2 364 aa21.04■□□□□ 0.96
NOTCH3-201ENST00000263388 XBP1P17861 261 aa21.04■□□□□ 0.96
NOTCH3-201ENST00000263388 NAP1L1P55209 391 aaKnown RBP21.03■□□□□ 0.96
NOTCH3-201ENST00000263388 CCDC173Q0VFZ6 552 aa21.03■□□□□ 0.96
NOTCH3-201ENST00000263388 JPH4Q96JJ6 628 aa21.03■□□□□ 0.96
NOTCH3-201ENST00000263388 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
NOTCH3-201ENST00000263388 MRE11P49959 708 aa21.02■□□□□ 0.96
NOTCH3-201ENST00000263388 ODF2Q5BJF6 829 aa21.02■□□□□ 0.96
NOTCH3-201ENST00000263388 KIF7Q2M1P5 1343 aa21.02■□□□□ 0.96
NOTCH3-201ENST00000263388 BRD4O60885 1362 aaPredicted RBP21.02■□□□□ 0.96
NOTCH3-201ENST00000263388 CT47A1Q5JQC4 288 aaPredicted RBP21.01■□□□□ 0.95
NOTCH3-201ENST00000263388 MINK1Q8N4C8 1332 aaPredicted RBP21.01■□□□□ 0.95
NOTCH3-201ENST00000263388 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
NOTCH3-201ENST00000263388 RAD21O60216 631 aa21.01■□□□□ 0.95
NOTCH3-201ENST00000263388 DHX16O60231 1041 aaKnown RBP21.01■□□□□ 0.95
NOTCH3-201ENST00000263388 MCM2P49736 904 aa21.01■□□□□ 0.95
NOTCH3-201ENST00000263388 WWC1Q8IX03 1113 aa21.01■□□□□ 0.95
NOTCH3-201ENST00000263388 PDCP20941 246 aa21■□□□□ 0.95
NOTCH3-201ENST00000263388 CNTROBQ8N137 903 aa21■□□□□ 0.95
NOTCH3-201ENST00000263388 ANO8Q9HCE9 1232 aaPredicted RBP21■□□□□ 0.95
NOTCH3-201ENST00000263388 CCDC7Q96M83 1385 aa21■□□□□ 0.95
NOTCH3-201ENST00000263388 CCP110O43303 1012 aa21■□□□□ 0.95
NOTCH3-201ENST00000263388 CCDC66A2RUB6 948 aa21■□□□□ 0.95
NOTCH3-201ENST00000263388 PSME1Q06323 249 aa20.99■□□□□ 0.95
NOTCH3-201ENST00000263388 FGD6Q6ZV73 1430 aa20.99■□□□□ 0.95
NOTCH3-201ENST00000263388 ERCC4Q92889 916 aaPredicted RBP20.99■□□□□ 0.95
NOTCH3-201ENST00000263388 FYCO1Q9BQS8 1478 aa20.99■□□□□ 0.95
NOTCH3-201ENST00000263388 LNPKQ9C0E8 428 aa20.99■□□□□ 0.95
NOTCH3-201ENST00000263388 CDC45O75419 566 aa20.98■□□□□ 0.95
NOTCH3-201ENST00000263388 H0YHG0 523 aa20.98■□□□□ 0.95
NOTCH3-201ENST00000263388 MBD3O95983 291 aa20.98■□□□□ 0.95
NOTCH3-201ENST00000263388 TSPYL4Q9UJ04 414 aa20.98■□□□□ 0.95
NOTCH3-201ENST00000263388 NECTIN2Q92692 538 aa20.97■□□□□ 0.95
NOTCH3-201ENST00000263388 GAPVD1Q14C86 1478 aa20.97■□□□□ 0.95
NOTCH3-201ENST00000263388 NFKBIBQ15653 356 aa20.96■□□□□ 0.95
NOTCH3-201ENST00000263388 ARHGAP5Q13017 1502 aa20.96■□□□□ 0.95
NOTCH3-201ENST00000263388 HIP1O00291 1037 aa20.96■□□□□ 0.95
NOTCH3-201ENST00000263388 FBXO3Q9UK99 471 aa20.96■□□□□ 0.95
NOTCH3-201ENST00000263388 SDF4Q9BRK5 362 aa20.96■□□□□ 0.95
NOTCH3-201ENST00000263388 KINO60870 393 aaKnown RBP20.95■□□□□ 0.94
NOTCH3-201ENST00000263388 SCAPERQ9BY12 1400 aa20.95■□□□□ 0.94
NOTCH3-201ENST00000263388 DHX8Q14562 1220 aaKnown RBP20.95■□□□□ 0.94
NOTCH3-201ENST00000263388 CAGE1Q8TC20 777 aa20.95■□□□□ 0.94
NOTCH3-201ENST00000263388 LRRC9Q6ZRR7 1453 aa20.95■□□□□ 0.94
NOTCH3-201ENST00000263388 ZRSR2Q15696 482 aaKnown RBP20.94■□□□□ 0.94
NOTCH3-201ENST00000263388 FBXW7Q969H0 707 aa20.94■□□□□ 0.94
NOTCH3-201ENST00000263388 UBTFL1P0CB47 393 aaPredicted RBP20.93■□□□□ 0.94
NOTCH3-201ENST00000263388 SART3Q15020 963 aaKnown RBP20.93■□□□□ 0.94
NOTCH3-201ENST00000263388 OFD1O75665 1012 aa20.93■□□□□ 0.94
NOTCH3-201ENST00000263388 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
NOTCH3-201ENST00000263388 PTPRGP23470 1445 aa20.93■□□□□ 0.94
NOTCH3-201ENST00000263388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.92■□□□□ 0.94
NOTCH3-201ENST00000263388 CFAP65Q6ZU64 1925 aaKnown RBP20.92■□□□□ 0.94
NOTCH3-201ENST00000263388 SMARCE1Q969G3 411 aa20.92■□□□□ 0.94
NOTCH3-201ENST00000263388 HMGN5P82970 282 aaKnown RBP20.91■□□□□ 0.94
NOTCH3-201ENST00000263388 RIC3Q7Z5B4 369 aa20.91■□□□□ 0.94
NOTCH3-201ENST00000263388 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
NOTCH3-201ENST00000263388 CNKSR2Q8WXI2 1034 aa20.91■□□□□ 0.94
NOTCH3-201ENST00000263388 PDILTQ8N807 584 aa20.9■□□□□ 0.94
NOTCH3-201ENST00000263388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.9■□□□□ 0.941e-7■■■■■ 115.4
NOTCH3-201ENST00000263388 TRIM5Q9C035 493 aa20.9■□□□□ 0.94
NOTCH3-201ENST00000263388 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
NOTCH3-201ENST00000263388 TRAK2O60296 914 aa20.89■□□□□ 0.94
NOTCH3-201ENST00000263388 HSP90AB2PQ58FF8 381 aa20.89■□□□□ 0.93
NOTCH3-201ENST00000263388 RUSC2Q8N2Y8 1516 aa20.89■□□□□ 0.93
NOTCH3-201ENST00000263388 TXLNAP40222 546 aa20.89■□□□□ 0.93
NOTCH3-201ENST00000263388 SYTL4Q96C24 671 aaPredicted RBP20.89■□□□□ 0.93
NOTCH3-201ENST00000263388 PANK1Q8TE04 598 aa20.88■□□□□ 0.93
NOTCH3-201ENST00000263388 FOSBP53539 338 aa20.88■□□□□ 0.93
NOTCH3-201ENST00000263388 RBM33Q96EV2 1170 aaKnown RBP20.88■□□□□ 0.93
NOTCH3-201ENST00000263388 TSPY26PQ9H489 355 aa20.88■□□□□ 0.93
NOTCH3-201ENST00000263388 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
NOTCH3-201ENST00000263388 FILIP1LQ4L180 1135 aa20.87■□□□□ 0.93
NOTCH3-201ENST00000263388 CAVIN1Q6NZI2 390 aaKnown RBP20.87■□□□□ 0.93
NOTCH3-201ENST00000263388 SMG6Q86US8 1419 aaKnown RBP20.87■□□□□ 0.93
NOTCH3-201ENST00000263388 RABEP1Q15276 862 aa20.87■□□□□ 0.93
NOTCH3-201ENST00000263388 CLASRPQ8N2M8 674 aaKnown RBP20.87■□□□□ 0.93
NOTCH3-201ENST00000263388 R3HCC1Q9Y3T6 440 aaKnown RBP20.86■□□□□ 0.93
NOTCH3-201ENST00000263388 WASHC4Q2M389 1173 aa20.86■□□□□ 0.93
NOTCH3-201ENST00000263388 LEKR1Q6ZMV7 388 aa20.86■□□□□ 0.93
NOTCH3-201ENST00000263388 ZNF396Q96N95 335 aaPredicted RBP20.86■□□□□ 0.93
NOTCH3-201ENST00000263388 CCDC30Q5VVM6 783 aa20.86■□□□□ 0.93
NOTCH3-201ENST00000263388 NEUROD6Q96NK8 337 aa20.86■□□□□ 0.93
NOTCH3-201ENST00000263388 EHBP1L1Q8N3D4 1523 aa20.85■□□□□ 0.93
NOTCH3-201ENST00000263388 GNAI3P08754 354 aa20.85■□□□□ 0.93
NOTCH3-201ENST00000263388 HMOX1P09601 288 aa20.85■□□□□ 0.93
NOTCH3-201ENST00000263388 SLC3A2P08195 630 aaKnown RBP20.85■□□□□ 0.93
NOTCH3-201ENST00000263388 RAPGEF4Q8WZA2 1011 aa20.85■□□□□ 0.93
NOTCH3-201ENST00000263388 MAGEC2Q9UBF1 373 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms