RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 FIBPO43427 364 aa14.58□□□□□ -0.08
SMG6-201ENST00000263073 GGNBP2Q9H3C7 697 aa14.58□□□□□ -0.08
SMG6-201ENST00000263073 TSPY26PQ9H489 355 aa14.58□□□□□ -0.08
SMG6-201ENST00000263073 CARMIL2Q6F5E8 1435 aa14.58□□□□□ -0.08
SMG6-201ENST00000263073 DHX16O60231 1041 aaKnown RBP14.58□□□□□ -0.08
SMG6-201ENST00000263073 SMC2O95347 1197 aa14.58□□□□□ -0.08
SMG6-201ENST00000263073 RUFY1Q96T51 708 aa14.58□□□□□ -0.08
SMG6-201ENST00000263073 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
SMG6-201ENST00000263073 ARGLU1Q9NWB6 273 aaPredicted RBP14.57□□□□□ -0.08
SMG6-201ENST00000263073 EVC2Q86UK5 1308 aa14.57□□□□□ -0.08
SMG6-201ENST00000263073 NEK4P51957 841 aa14.57□□□□□ -0.08
SMG6-201ENST00000263073 FYB1O15117 783 aa14.57□□□□□ -0.08
SMG6-201ENST00000263073 API5Q9BZZ5 524 aaKnown RBP14.57□□□□□ -0.08
SMG6-201ENST00000263073 MAP4K4O95819 1239 aaPredicted RBP14.56□□□□□ -0.08
SMG6-201ENST00000263073 TMX4Q9H1E5 349 aaPredicted RBP14.56□□□□□ -0.08
SMG6-201ENST00000263073 CHMP4AQ9BY43 222 aa14.56□□□□□ -0.08
SMG6-201ENST00000263073 G3BP1Q13283 466 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMG6-201ENST00000263073 PRDM10Q9NQV6 1147 aa14.56□□□□□ -0.08
SMG6-201ENST00000263073 TSPYL4Q9UJ04 414 aa14.56□□□□□ -0.08
SMG6-201ENST00000263073 NEUROD6Q96NK8 337 aa14.56□□□□□ -0.08
SMG6-201ENST00000263073 UQCRHLA0A096LP55 91 aa14.56□□□□□ -0.08
SMG6-201ENST00000263073 UQCRHP07919 91 aa14.56□□□□□ -0.08
SMG6-201ENST00000263073 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
SMG6-201ENST00000263073 ZNF644Q9H582 1327 aaPredicted RBP14.55□□□□□ -0.08
SMG6-201ENST00000263073 ATP2B1P20020 1258 aa14.55□□□□□ -0.08
SMG6-201ENST00000263073 RNF20Q5VTR2 975 aa14.55□□□□□ -0.08
SMG6-201ENST00000263073 SDF4Q9BRK5 362 aa14.55□□□□□ -0.08
SMG6-201ENST00000263073 BRPF1P55201 1214 aaPredicted RBP14.54□□□□□ -0.08
SMG6-201ENST00000263073 NEXNQ0ZGT2 675 aa14.54□□□□□ -0.08
SMG6-201ENST00000263073 NUTM2GQ5VZR2 741 aa14.54□□□□□ -0.08
SMG6-201ENST00000263073 TSR2Q969E8 191 aaKnown RBP14.54□□□□□ -0.08
SMG6-201ENST00000263073 GRPEL1Q9HAV7 217 aa14.54□□□□□ -0.08
SMG6-201ENST00000263073 HSP90B2PQ58FF3 399 aa14.54□□□□□ -0.08
SMG6-201ENST00000263073 CPLX2Q6PUV4 134 aaKnown RBP14.54□□□□□ -0.08
SMG6-201ENST00000263073 ANKRD20A12PQ8NF67 263 aa14.54□□□□□ -0.08
SMG6-201ENST00000263073 CAGE1Q8TC20 777 aa14.54□□□□□ -0.08
SMG6-201ENST00000263073 BACH2Q9BYV9 841 aa14.54□□□□□ -0.08
SMG6-201ENST00000263073 CCDC173Q0VFZ6 552 aa14.54□□□□□ -0.08
SMG6-201ENST00000263073 STK3Q13188 491 aa14.53□□□□□ -0.08
SMG6-201ENST00000263073 CABP2Q9NPB3 220 aa14.53□□□□□ -0.08
SMG6-201ENST00000263073 FAM177A1Q8N128 213 aaPredicted RBP14.53□□□□□ -0.08
SMG6-201ENST00000263073 AK7Q96M32 723 aa14.53□□□□□ -0.08
SMG6-201ENST00000263073 TRDNQ13061 729 aa14.53□□□□□ -0.08
SMG6-201ENST00000263073 WASHC4Q2M389 1173 aa14.52□□□□□ -0.08
SMG6-201ENST00000263073 NOM1Q5C9Z4 860 aaKnown RBP14.52□□□□□ -0.09
SMG6-201ENST00000263073 ERICH4A6NGS2 130 aa14.52□□□□□ -0.09
SMG6-201ENST00000263073 H0YHG0 523 aa14.52□□□□□ -0.09
SMG6-201ENST00000263073 TTC5Q8N0Z6 440 aa14.52□□□□□ -0.09
SMG6-201ENST00000263073 EXOSC9Q06265 439 aaKnown RBP14.51□□□□□ -0.09
SMG6-201ENST00000263073 NOB1Q9ULX3 412 aaKnown RBP14.51□□□□□ -0.09
SMG6-201ENST00000263073 MAP7D2Q96T17 732 aa14.51□□□□□ -0.09
SMG6-201ENST00000263073 HOOK1Q9UJC3 728 aaKnown RBP14.51□□□□□ -0.09
SMG6-201ENST00000263073 TMEM132EQ6IEE7 984 aa14.5□□□□□ -0.09
SMG6-201ENST00000263073 SYTL4Q96C24 671 aaPredicted RBP14.5□□□□□ -0.09
SMG6-201ENST00000263073 EID1Q9Y6B2 187 aa14.5□□□□□ -0.09
SMG6-201ENST00000263073 OLFM4Q6UX06 510 aa14.5□□□□□ -0.09
SMG6-201ENST00000263073 TCP11L2Q8N4U5 519 aa14.5□□□□□ -0.09
SMG6-201ENST00000263073 DNAJC2Q99543 621 aaKnown RBP14.5□□□□□ -0.09
SMG6-201ENST00000263073 PLCD4Q9BRC7 762 aa14.5□□□□□ -0.09
SMG6-201ENST00000263073 MTHFSP49914 203 aa14.49□□□□□ -0.09
SMG6-201ENST00000263073 NCAPD3P42695 1498 aa14.49□□□□□ -0.09
SMG6-201ENST00000263073 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.49□□□□□ -0.09
SMG6-201ENST00000263073 FSD1Q9BTV5 496 aa14.49□□□□□ -0.09
SMG6-201ENST00000263073 UBTFL1P0CB47 393 aaPredicted RBP14.48□□□□□ -0.09
SMG6-201ENST00000263073 VPS37DQ86XT2 251 aa14.48□□□□□ -0.09
SMG6-201ENST00000263073 ERICH2A1L162 156 aa14.47□□□□□ -0.09
SMG6-201ENST00000263073 CALRP27797 417 aaKnown RBP14.47□□□□□ -0.09
SMG6-201ENST00000263073 GNAI1P63096 354 aa14.47□□□□□ -0.09
SMG6-201ENST00000263073 ROCK1Q13464 1354 aa14.47□□□□□ -0.09
SMG6-201ENST00000263073 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
SMG6-201ENST00000263073 RRP12Q5JTH9 1297 aaKnown RBP14.47□□□□□ -0.09
SMG6-201ENST00000263073 NAT10Q9H0A0 1025 aaKnown RBP14.47□□□□□ -0.09
SMG6-201ENST00000263073 ERC2O15083 957 aa14.47□□□□□ -0.09
SMG6-201ENST00000263073 CCDC47Q96A33 483 aaKnown RBP14.47□□□□□ -0.09
SMG6-201ENST00000263073 SURF6O75683 361 aaKnown RBP14.47□□□□□ -0.09
SMG6-201ENST00000263073 PODXL2Q9NZ53 605 aa14.47□□□□□ -0.09
SMG6-201ENST00000263073 PPP2R1AP30153 589 aa14.46□□□□□ -0.09
SMG6-201ENST00000263073 RIC3Q7Z5B4 369 aa14.46□□□□□ -0.09
SMG6-201ENST00000263073 TCEAL9Q9UHQ7 104 aa14.46□□□□□ -0.09
SMG6-201ENST00000263073 AXDND1Q5T1B0 1012 aaPredicted RBP14.46□□□□□ -0.09
SMG6-201ENST00000263073 RALYLQ86SE5 291 aaKnown RBP14.46□□□□□ -0.09
SMG6-201ENST00000263073 ACBD3Q9H3P7 528 aa14.46□□□□□ -0.09
SMG6-201ENST00000263073 CNTROBQ8N137 903 aa14.46□□□□□ -0.1
SMG6-201ENST00000263073 SAFBQ15424 915 aaKnown RBP eCLIP14.45□□□□□ -0.15e-6■□□□□ 8
SMG6-201ENST00000263073 HSP90AB3PQ58FF7 597 aa14.45□□□□□ -0.1
SMG6-201ENST00000263073 MTERF4Q7Z6M4 381 aaKnown RBP14.45□□□□□ -0.1
SMG6-201ENST00000263073 CHMP4CQ96CF2 233 aa14.45□□□□□ -0.1
SMG6-201ENST00000263073 CCDC66A2RUB6 948 aa14.44□□□□□ -0.1
SMG6-201ENST00000263073 KINO60870 393 aaKnown RBP14.44□□□□□ -0.1
SMG6-201ENST00000263073 EVA1CP58658 441 aa14.44□□□□□ -0.1
SMG6-201ENST00000263073 TSPYL1Q9H0U9 437 aa14.44□□□□□ -0.1
SMG6-201ENST00000263073 K7ELQ4 463 aaPredicted RBP14.44□□□□□ -0.1
SMG6-201ENST00000263073 CBX1P83916 185 aa14.44□□□□□ -0.1
SMG6-201ENST00000263073 CWC15Q9P013 229 aaKnown RBP14.44□□□□□ -0.1
SMG6-201ENST00000263073 ESPNB1AK53 854 aa14.44□□□□□ -0.1
SMG6-201ENST00000263073 VGFO15240 615 aaPredicted RBP14.44□□□□□ -0.1
SMG6-201ENST00000263073 FAM193AP78312 1265 aa14.44□□□□□ -0.1
SMG6-201ENST00000263073 BRD4O60885 1362 aaPredicted RBP14.43□□□□□ -0.1
SMG6-201ENST00000263073 FAM177BA6PVY3 158 aa14.43□□□□□ -0.1
SMG6-201ENST00000263073 MBD3O95983 291 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms