RNA–Protein interactions for RNA: ENST00000262613.9

SLC9A3R1-201, Transcript of SLC9A3 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A3R1, Length 1,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-201ENST00000262613 HNRNPUQ00839 825 aaKnown RBP eCLIP28.42■■■□□ 2.14
SLC9A3R1-201ENST00000262613 PANK3Q9H999 370 aa28.41■■■□□ 2.14
SLC9A3R1-201ENST00000262613 EVC2Q86UK5 1308 aa28.41■■■□□ 2.14
SLC9A3R1-201ENST00000262613 SLC26A8Q96RN1 970 aa28.41■■■□□ 2.14
SLC9A3R1-201ENST00000262613 TBX22Q9Y458 520 aa28.41■■■□□ 2.14
SLC9A3R1-201ENST00000262613 PER1O15534 1290 aaPredicted RBP28.4■■■□□ 2.14
SLC9A3R1-201ENST00000262613 FAM135BQ49AJ0 1406 aa28.4■■■□□ 2.14
SLC9A3R1-201ENST00000262613 PLEKHH1Q9ULM0 1364 aa28.39■■■□□ 2.14
SLC9A3R1-201ENST00000262613 SIRT1Q96EB6 747 aa28.39■■■□□ 2.14
SLC9A3R1-201ENST00000262613 PUS7Q96PZ0 661 aaKnown RBP28.39■■■□□ 2.14
SLC9A3R1-201ENST00000262613 ANKLE2Q86XL3 938 aa28.39■■■□□ 2.13
SLC9A3R1-201ENST00000262613 PTPRUQ92729 1446 aa28.38■■■□□ 2.13
SLC9A3R1-201ENST00000262613 WAPLQ7Z5K2 1190 aa28.37■■■□□ 2.13
SLC9A3R1-201ENST00000262613 MINK1Q8N4C8 1332 aaPredicted RBP28.36■■■□□ 2.13
SLC9A3R1-201ENST00000262613 KDM4FA0A1W2PPD8 638 aa28.36■■■□□ 2.13
SLC9A3R1-201ENST00000262613 ERICH6BQ5W0A0 696 aa28.34■■■□□ 2.13
SLC9A3R1-201ENST00000262613 ROBO2Q9HCK4 1378 aa28.33■■■□□ 2.13
SLC9A3R1-201ENST00000262613 XRN1Q8IZH2 1706 aaKnown RBP28.31■■■□□ 2.12
SLC9A3R1-201ENST00000262613 CABP2Q9NPB3 220 aa28.3■■■□□ 2.12
SLC9A3R1-201ENST00000262613 PIK3R4Q99570 1358 aa28.29■■■□□ 2.12
SLC9A3R1-201ENST00000262613 KTN1Q86UP2 1357 aaKnown RBP28.28■■■□□ 2.12
SLC9A3R1-201ENST00000262613 PTCH1Q13635 1447 aa28.27■■■□□ 2.12
SLC9A3R1-201ENST00000262613 CCDC184Q52MB2 194 aa28.26■■■□□ 2.11
SLC9A3R1-201ENST00000262613 AMOTL2Q9Y2J4 779 aa28.26■■■□□ 2.11
SLC9A3R1-201ENST00000262613 NPHP4O75161 1426 aaPredicted RBP28.26■■■□□ 2.11
SLC9A3R1-201ENST00000262613 SRPK2P78362 688 aaKnown RBP28.26■■■□□ 2.11
SLC9A3R1-201ENST00000262613 CNGB1Q14028 1251 aaPredicted RBP28.26■■■□□ 2.11
SLC9A3R1-201ENST00000262613 CDK19Q9BWU1 502 aa28.25■■■□□ 2.11
SLC9A3R1-201ENST00000262613 MRS2Q9HD23 443 aa28.25■■■□□ 2.11
SLC9A3R1-201ENST00000262613 ATAD2Q6PL18 1390 aa28.25■■■□□ 2.11
SLC9A3R1-201ENST00000262613 SLC12A5Q9H2X9 1139 aa28.24■■■□□ 2.11
SLC9A3R1-201ENST00000262613 PARD3Q8TEW0 1356 aa28.24■■■□□ 2.11
SLC9A3R1-201ENST00000262613 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.24■■■□□ 2.11
SLC9A3R1-201ENST00000262613 TMC1Q8TDI8 760 aa28.24■■■□□ 2.11
SLC9A3R1-201ENST00000262613 KNSTRNQ9Y448 316 aa28.24■■■□□ 2.11
SLC9A3R1-201ENST00000262613 ADGRB2O60241 1585 aa28.23■■■□□ 2.11
SLC9A3R1-201ENST00000262613 NINLQ9Y2I6 1382 aa28.23■■■□□ 2.11
SLC9A3R1-201ENST00000262613 RALBP1Q15311 655 aa28.23■■■□□ 2.11
SLC9A3R1-201ENST00000262613 CHD2O14647 1828 aaKnown RBP28.22■■■□□ 2.11
SLC9A3R1-201ENST00000262613 AMER1Q5JTC6 1135 aaPredicted RBP28.2■■■□□ 2.11
SLC9A3R1-201ENST00000262613 CARD14Q9BXL6 1004 aa28.2■■■□□ 2.11
SLC9A3R1-201ENST00000262613 NCKAP5LQ9HCH0 1330 aa28.2■■■□□ 2.11
SLC9A3R1-201ENST00000262613 FANCIQ9NVI1 1328 aa28.2■■■□□ 2.11
SLC9A3R1-201ENST00000262613 WASLO00401 505 aaPredicted RBP28.19■■■□□ 2.1
SLC9A3R1-201ENST00000262613 NPC1L1Q9UHC9 1359 aa28.19■■■□□ 2.1
SLC9A3R1-201ENST00000262613 ANKRD36BQ8N2N9 1353 aa28.18■■■□□ 2.1
SLC9A3R1-201ENST00000262613 CC2D1BQ5T0F9 858 aaKnown RBP28.18■■■□□ 2.1
SLC9A3R1-201ENST00000262613 ZBED9Q6R2W3 1325 aa28.18■■■□□ 2.1
SLC9A3R1-201ENST00000262613 MYBBP1AQ9BQG0 1328 aaKnown RBP28.16■■■□□ 2.1
SLC9A3R1-201ENST00000262613 USP32Q8NFA0 1604 aa28.15■■■□□ 2.1
SLC9A3R1-201ENST00000262613 NSD3Q9BZ95 1437 aa28.15■■■□□ 2.1
SLC9A3R1-201ENST00000262613 KCNA6P17658 529 aa28.15■■■□□ 2.1
SLC9A3R1-201ENST00000262613 PPP4R2Q9NY27 417 aa28.14■■■□□ 2.1
SLC9A3R1-201ENST00000262613 LMTK3Q96Q04 1460 aa28.13■■■□□ 2.09
SLC9A3R1-201ENST00000262613 CD163L1Q9NR16 1453 aa28.13■■■□□ 2.09
SLC9A3R1-201ENST00000262613 IRX6P78412 446 aaPredicted RBP28.13■■■□□ 2.09
SLC9A3R1-201ENST00000262613 FAM9BQ8IZU0 186 aa28.13■■■□□ 2.09
SLC9A3R1-201ENST00000262613 A0A1W2PP64 1363 aa28.11■■■□□ 2.09
SLC9A3R1-201ENST00000262613 MSH5O43196 834 aa28.11■■■□□ 2.09
SLC9A3R1-201ENST00000262613 NWD1Q149M9 1564 aa28.09■■■□□ 2.09
SLC9A3R1-201ENST00000262613 ATP7BP35670 1465 aa28.09■■■□□ 2.09
SLC9A3R1-201ENST00000262613 CABP1Q9NZU7 370 aa28.08■■■□□ 2.09
SLC9A3R1-201ENST00000262613 BRD4O60885 1362 aaPredicted RBP28.08■■■□□ 2.08
SLC9A3R1-201ENST00000262613 HSPA2P54652 639 aa28.07■■■□□ 2.08
SLC9A3R1-201ENST00000262613 TERF2IPQ9NYB0 399 aa28.06■■■□□ 2.08
SLC9A3R1-201ENST00000262613 NUDT16Q96DE0 195 aaKnown RBP28.06■■■□□ 2.08
SLC9A3R1-201ENST00000262613 NLRP13Q86W25 1043 aa28.05■■■□□ 2.08
SLC9A3R1-201ENST00000262613 TOPAZ1Q8N9V7 1692 aa28.05■■■□□ 2.08
SLC9A3R1-201ENST00000262613 PPIP5K1Q6PFW1 1433 aa28.05■■■□□ 2.08
SLC9A3R1-201ENST00000262613 PRR36Q9H6K5 1346 aa28.05■■■□□ 2.08
SLC9A3R1-201ENST00000262613 CCDC61Q9Y6R9 512 aa28.02■■■□□ 2.08
SLC9A3R1-201ENST00000262613 CGNL1Q0VF96 1302 aa28.02■■■□□ 2.08
SLC9A3R1-201ENST00000262613 NALCNQ8IZF0 1738 aa28.01■■■□□ 2.08
SLC9A3R1-201ENST00000262613 CDC42BPGQ6DT37 1551 aa28.01■■■□□ 2.07
SLC9A3R1-201ENST00000262613 HDGFL2Q7Z4V5 671 aaPredicted RBP28.01■■■□□ 2.07
SLC9A3R1-201ENST00000262613 CPSF1Q10570 1443 aaKnown RBP27.99■■■□□ 2.07
SLC9A3R1-201ENST00000262613 STRCQ7RTU9 1775 aa27.99■■■□□ 2.07
SLC9A3R1-201ENST00000262613 NSD2O96028 1365 aa27.99■■■□□ 2.07
SLC9A3R1-201ENST00000262613 PPP2R1AP30153 589 aa27.98■■■□□ 2.07
SLC9A3R1-201ENST00000262613 AKAP12Q02952 1782 aa27.98■■■□□ 2.07
SLC9A3R1-201ENST00000262613 SMG6Q86US8 1419 aaKnown RBP27.97■■■□□ 2.07
SLC9A3R1-201ENST00000262613 FMN2Q9NZ56 1722 aa27.97■■■□□ 2.07
SLC9A3R1-201ENST00000262613 ITSN1Q15811 1721 aa27.97■■■□□ 2.07
SLC9A3R1-201ENST00000262613 PNISRQ8TF01 805 aaKnown RBP27.97■■■□□ 2.07
SLC9A3R1-201ENST00000262613 MON2Q7Z3U7 1717 aa27.96■■■□□ 2.07
SLC9A3R1-201ENST00000262613 NKTRP30414 1462 aaKnown RBP27.95■■■□□ 2.06
SLC9A3R1-201ENST00000262613 ADGRL3Q9HAR2 1447 aa27.94■■■□□ 2.06
SLC9A3R1-201ENST00000262613 ANKRD26Q9UPS8 1709 aa27.94■■■□□ 2.06
SLC9A3R1-201ENST00000262613 KIF20BQ96Q89 1820 aa27.93■■■□□ 2.06
SLC9A3R1-201ENST00000262613 ANKARQ7Z5J8 1434 aa27.93■■■□□ 2.06
SLC9A3R1-201ENST00000262613 NUTM2FA1L443 756 aa27.92■■■□□ 2.06
SLC9A3R1-201ENST00000262613 RGPD8O14715 1765 aaPredicted RBP27.92■■■□□ 2.06
SLC9A3R1-201ENST00000262613 STRCP1A6NGW2 1772 aa27.91■■■□□ 2.06
SLC9A3R1-201ENST00000262613 PLEKHG3A1L390 1219 aa27.91■■■□□ 2.06
SLC9A3R1-201ENST00000262613 MORC1Q86VD1 984 aa27.91■■■□□ 2.06
SLC9A3R1-201ENST00000262613 EDC4Q6P2E9 1401 aaKnown RBP27.9■■■□□ 2.06
SLC9A3R1-201ENST00000262613 RBM33Q96EV2 1170 aaKnown RBP27.9■■■□□ 2.06
SLC9A3R1-201ENST00000262613 FYB1O15117 783 aa27.88■■■□□ 2.05
SLC9A3R1-201ENST00000262613 NRKQ7Z2Y5 1582 aa27.86■■■□□ 2.05
SLC9A3R1-201ENST00000262613 ZNF692Q9BU19 519 aaPredicted RBP27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms