RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
VMP1-201ENST00000262291 A2ML1A8K2U0 1454 aa18.11■□□□□ 0.49
VMP1-201ENST00000262291 TULP4Q9NRJ4 1543 aa18.1■□□□□ 0.49
VMP1-201ENST00000262291 RIMS2Q9UQ26 1411 aa18.1■□□□□ 0.49
VMP1-201ENST00000262291 ZFYVE9O95405 1425 aa18.09■□□□□ 0.49
VMP1-201ENST00000262291 YTHDC2Q9H6S0 1430 aaKnown RBP18.09■□□□□ 0.49
VMP1-201ENST00000262291 MORC1Q86VD1 984 aa18.08■□□□□ 0.49
VMP1-201ENST00000262291 SPATA31D1Q6ZQQ2 1576 aa18.07■□□□□ 0.48
VMP1-201ENST00000262291 ALKQ9UM73 1620 aa18.07■□□□□ 0.48
VMP1-201ENST00000262291 B4GALNT3Q6L9W6 998 aa18.07■□□□□ 0.48
VMP1-201ENST00000262291 PLEKHH1Q9ULM0 1364 aa18.05■□□□□ 0.48
VMP1-201ENST00000262291 PTPRMP28827 1452 aa18.05■□□□□ 0.48
VMP1-201ENST00000262291 BLMP54132 1417 aaPredicted RBP18.04■□□□□ 0.48
VMP1-201ENST00000262291 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
VMP1-201ENST00000262291 TNRQ92752 1358 aa18.03■□□□□ 0.48
VMP1-201ENST00000262291 TXNDC2Q86VQ3 553 aa18.03■□□□□ 0.48
VMP1-201ENST00000262291 CDK19Q9BWU1 502 aa18.03■□□□□ 0.48
VMP1-201ENST00000262291 ERICH6Q7L0X2 663 aa18.02■□□□□ 0.48
VMP1-201ENST00000262291 METP08581 1390 aa18.01■□□□□ 0.47
VMP1-201ENST00000262291 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
VMP1-201ENST00000262291 CGNL1Q0VF96 1302 aa18■□□□□ 0.47
VMP1-201ENST00000262291 PPP4R2Q9NY27 417 aa18■□□□□ 0.47
VMP1-201ENST00000262291 A0A1W2PP64 1363 aa18■□□□□ 0.47
VMP1-201ENST00000262291 APAF1O14727 1248 aa18■□□□□ 0.47
VMP1-201ENST00000262291 CABP1Q9NZU7 370 aa17.99■□□□□ 0.47
VMP1-201ENST00000262291 MTHFSP49914 203 aa17.99■□□□□ 0.47
VMP1-201ENST00000262291 RCAN3Q9UKA8 241 aa17.99■□□□□ 0.47
VMP1-201ENST00000262291 ANKRD36BQ8N2N9 1353 aa17.98■□□□□ 0.47
VMP1-201ENST00000262291 ANO8Q9HCE9 1232 aaPredicted RBP17.97■□□□□ 0.47
VMP1-201ENST00000262291 NCKAP5LQ9HCH0 1330 aa17.97■□□□□ 0.47
VMP1-201ENST00000262291 PLIN1O60240 522 aa17.97■□□□□ 0.47
VMP1-201ENST00000262291 LTKP29376 864 aa17.96■□□□□ 0.47
VMP1-201ENST00000262291 NEUROD2Q15784 382 aa17.96■□□□□ 0.47
VMP1-201ENST00000262291 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.95■□□□□ 0.46
VMP1-201ENST00000262291 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.95■□□□□ 0.46
VMP1-201ENST00000262291 SLC26A8Q96RN1 970 aa17.95■□□□□ 0.46
VMP1-201ENST00000262291 RRP7AQ9Y3A4 280 aaKnown RBP17.95■□□□□ 0.46
VMP1-201ENST00000262291 FBLN1P23142 703 aa17.94■□□□□ 0.46
VMP1-201ENST00000262291 PDE3BQ13370 1112 aa17.94■□□□□ 0.46
VMP1-201ENST00000262291 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
VMP1-201ENST00000262291 NUTM2FA1L443 756 aa17.93■□□□□ 0.46
VMP1-201ENST00000262291 RRP1P56182 461 aaKnown RBP17.93■□□□□ 0.46
VMP1-201ENST00000262291 DEKP35659 375 aaKnown RBP17.92■□□□□ 0.46
VMP1-201ENST00000262291 SPINK5Q9NQ38 1064 aaPredicted RBP17.92■□□□□ 0.46
VMP1-201ENST00000262291 DMRT2Q9Y5R5 561 aa17.92■□□□□ 0.46
VMP1-201ENST00000262291 TMEM2Q9UHN6 1383 aa17.92■□□□□ 0.46
VMP1-201ENST00000262291 NRXN3Q9Y4C0 1643 aa17.92■□□□□ 0.46
VMP1-201ENST00000262291 PUS7Q96PZ0 661 aaKnown RBP17.92■□□□□ 0.46
VMP1-201ENST00000262291 TERF2IPQ9NYB0 399 aa17.92■□□□□ 0.46
VMP1-201ENST00000262291 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
VMP1-201ENST00000262291 FYB1O15117 783 aa17.91■□□□□ 0.46
VMP1-201ENST00000262291 SETD1AO15047 1707 aaKnown RBP17.9■□□□□ 0.46
VMP1-201ENST00000262291 EXOC6Q8TAG9 804 aa17.9■□□□□ 0.46
VMP1-201ENST00000262291 CD163L1Q9NR16 1453 aa17.9■□□□□ 0.46
VMP1-201ENST00000262291 ERICH6BQ5W0A0 696 aa17.89■□□□□ 0.45
VMP1-201ENST00000262291 HDGFL2Q7Z4V5 671 aaPredicted RBP17.89■□□□□ 0.45
VMP1-201ENST00000262291 POLR3AO14802 1390 aaPredicted RBP17.89■□□□□ 0.45
VMP1-201ENST00000262291 HDGFP51858 240 aaKnown RBP17.89■□□□□ 0.45
VMP1-201ENST00000262291 INSRP06213 1382 aa17.88■□□□□ 0.45
VMP1-201ENST00000262291 ABCC11Q96J66 1382 aa17.88■□□□□ 0.45
VMP1-201ENST00000262291 GOLGA2Q08379 1002 aa17.88■□□□□ 0.45
VMP1-201ENST00000262291 UBR1Q8IWV7 1749 aa17.88■□□□□ 0.45
VMP1-201ENST00000262291 DUSP27Q5VZP5 1158 aa17.87■□□□□ 0.45
VMP1-201ENST00000262291 WASLO00401 505 aaPredicted RBP17.87■□□□□ 0.45
VMP1-201ENST00000262291 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
VMP1-201ENST00000262291 CCDC136Q96JN2 1154 aa17.87■□□□□ 0.45
VMP1-201ENST00000262291 ZRANB1Q9UGI0 708 aa17.87■□□□□ 0.45
VMP1-201ENST00000262291 ZNF521Q96K83 1311 aa17.87■□□□□ 0.45
VMP1-201ENST00000262291 U2AF1L5P0DN76 240 aaPredicted RBP17.86■□□□□ 0.45
VMP1-201ENST00000262291 U2AF1Q01081 240 aaKnown RBP eCLIP17.86■□□□□ 0.451e-15■■■□□ 17.4
VMP1-201ENST00000262291 U2SURPO15042 1029 aaKnown RBP17.86■□□□□ 0.45
VMP1-201ENST00000262291 CFAP53Q96M91 514 aa17.86■□□□□ 0.45
VMP1-201ENST00000262291 ROBO2Q9HCK4 1378 aa17.85■□□□□ 0.45
VMP1-201ENST00000262291 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
VMP1-201ENST00000262291 C3P01024 1663 aa17.84■□□□□ 0.45
VMP1-201ENST00000262291 C20orf194Q5TEA3 1177 aa17.84■□□□□ 0.45
VMP1-201ENST00000262291 USP32Q8NFA0 1604 aa17.83■□□□□ 0.45
VMP1-201ENST00000262291 ADAMTS13Q76LX8 1427 aa17.83■□□□□ 0.45
VMP1-201ENST00000262291 SHPRHQ149N8 1683 aa17.83■□□□□ 0.45
VMP1-201ENST00000262291 SLFN5Q08AF3 891 aa17.83■□□□□ 0.45
VMP1-201ENST00000262291 TCP11L2Q8N4U5 519 aa17.83■□□□□ 0.45
VMP1-201ENST00000262291 FANCIQ9NVI1 1328 aa17.83■□□□□ 0.44
VMP1-201ENST00000262291 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.44
VMP1-201ENST00000262291 EID1Q9Y6B2 187 aa17.83■□□□□ 0.44
VMP1-201ENST00000262291 DLC1Q96QB1 1528 aa17.82■□□□□ 0.44
VMP1-201ENST00000262291 NME9Q86XW9 330 aa17.82■□□□□ 0.44
VMP1-201ENST00000262291 PPIP5K1Q6PFW1 1433 aa17.82■□□□□ 0.44
VMP1-201ENST00000262291 FER1L4A9Z1Z3 1794 aa17.81■□□□□ 0.44
VMP1-201ENST00000262291 NSD2O96028 1365 aa17.81■□□□□ 0.44
VMP1-201ENST00000262291 RUNDC1Q96C34 613 aa17.8■□□□□ 0.44
VMP1-201ENST00000262291 PRR36Q9H6K5 1346 aa17.8■□□□□ 0.44
VMP1-201ENST00000262291 WWC1Q8IX03 1113 aa17.8■□□□□ 0.44
VMP1-201ENST00000262291 CRBNQ96SW2 442 aa17.8■□□□□ 0.44
VMP1-201ENST00000262291 NLRP1Q9C000 1473 aa17.79■□□□□ 0.44
VMP1-201ENST00000262291 NBR1Q14596 966 aa17.78■□□□□ 0.44
VMP1-201ENST00000262291 AMOTL2Q9Y2J4 779 aa17.78■□□□□ 0.44
VMP1-201ENST00000262291 PTPRUQ92729 1446 aa17.78■□□□□ 0.44
VMP1-201ENST00000262291 PLEKHG1Q9ULL1 1385 aa17.77■□□□□ 0.44
VMP1-201ENST00000262291 BCAR3O75815 825 aa17.76■□□□□ 0.43
VMP1-201ENST00000262291 CCDC61Q9Y6R9 512 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms