RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 ZNF644Q9H582 1327 aaPredicted RBP13.08□□□□□ -0.32
CSNK1A1-201ENST00000261798 PODXL2Q9NZ53 605 aa13.08□□□□□ -0.32
CSNK1A1-201ENST00000261798 JPH4Q96JJ6 628 aa13.08□□□□□ -0.32
CSNK1A1-201ENST00000261798 ACBD3Q9H3P7 528 aa13.08□□□□□ -0.32
CSNK1A1-201ENST00000261798 NUTM2DQ5VT03 806 aaPredicted RBP13.08□□□□□ -0.32
CSNK1A1-201ENST00000261798 COG3Q96JB2 828 aa13.08□□□□□ -0.32
CSNK1A1-201ENST00000261798 CWC15Q9P013 229 aaKnown RBP13.08□□□□□ -0.32
CSNK1A1-201ENST00000261798 HSP90B2PQ58FF3 399 aa13.07□□□□□ -0.32
CSNK1A1-201ENST00000261798 PES1O00541 588 aaKnown RBP13.06□□□□□ -0.32
CSNK1A1-201ENST00000261798 IPO7O95373 1038 aaKnown RBP13.06□□□□□ -0.32
CSNK1A1-201ENST00000261798 TAF7LQ5H9L4 462 aa13.06□□□□□ -0.32
CSNK1A1-201ENST00000261798 PDCL3Q9H2J4 239 aa13.06□□□□□ -0.32
CSNK1A1-201ENST00000261798 IFIT2P09913 472 aaKnown RBP13.06□□□□□ -0.32
CSNK1A1-201ENST00000261798 NAT10Q9H0A0 1025 aaKnown RBP13.06□□□□□ -0.32
CSNK1A1-201ENST00000261798 HSP90AB4PQ58FF6 505 aa13.05□□□□□ -0.32
CSNK1A1-201ENST00000261798 CT47B1P0C2W7 299 aaPredicted RBP13.05□□□□□ -0.32
CSNK1A1-201ENST00000261798 MTHFSP49914 203 aa13.05□□□□□ -0.32
CSNK1A1-201ENST00000261798 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
CSNK1A1-201ENST00000261798 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.05□□□□□ -0.32
CSNK1A1-201ENST00000261798 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
CSNK1A1-201ENST00000261798 HOOK1Q9UJC3 728 aaKnown RBP13.04□□□□□ -0.32
CSNK1A1-201ENST00000261798 FKBP5Q13451 457 aaPredicted RBP13.04□□□□□ -0.32
CSNK1A1-201ENST00000261798 EID1Q9Y6B2 187 aa13.04□□□□□ -0.32
CSNK1A1-201ENST00000261798 MVPQ14764 893 aaKnown RBP13.04□□□□□ -0.32
CSNK1A1-201ENST00000261798 ERC2O15083 957 aa13.04□□□□□ -0.32
CSNK1A1-201ENST00000261798 CPLX1O14810 134 aa13.04□□□□□ -0.32
CSNK1A1-201ENST00000261798 PDCP20941 246 aa13.04□□□□□ -0.32
CSNK1A1-201ENST00000261798 TOMM22Q9NS69 142 aa13.04□□□□□ -0.32
CSNK1A1-201ENST00000261798 LRRFIP1Q32MZ4 808 aaKnown RBP13.03□□□□□ -0.32
CSNK1A1-201ENST00000261798 ANKRD20A12PQ8NF67 263 aa13.03□□□□□ -0.32
CSNK1A1-201ENST00000261798 CCDC112Q8NEF3 446 aa13.03□□□□□ -0.32
CSNK1A1-201ENST00000261798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.03□□□□□ -0.32
CSNK1A1-201ENST00000261798 WDR63Q8IWG1 891 aa13.03□□□□□ -0.32
CSNK1A1-201ENST00000261798 C9orf78Q9NZ63 289 aaPredicted RBP13.02□□□□□ -0.32
CSNK1A1-201ENST00000261798 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.32
CSNK1A1-201ENST00000261798 SDF4Q9BRK5 362 aa13.02□□□□□ -0.32
CSNK1A1-201ENST00000261798 FIBPO43427 364 aa13.02□□□□□ -0.33
CSNK1A1-201ENST00000261798 WDR33Q9C0J8 1336 aaKnown RBP13.02□□□□□ -0.33
CSNK1A1-201ENST00000261798 CCDC192P0DO97 292 aa13.02□□□□□ -0.33
CSNK1A1-201ENST00000261798 TRIM29Q14134 588 aa13.02□□□□□ -0.33
CSNK1A1-201ENST00000261798 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
CSNK1A1-201ENST00000261798 SLFN5Q08AF3 891 aa13.01□□□□□ -0.33
CSNK1A1-201ENST00000261798 ATF7IPQ6VMQ6 1270 aa13.01□□□□□ -0.33
CSNK1A1-201ENST00000261798 MINK1Q8N4C8 1332 aaPredicted RBP13.01□□□□□ -0.33
CSNK1A1-201ENST00000261798 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
CSNK1A1-201ENST00000261798 CCDC27Q2M243 656 aa13.01□□□□□ -0.33
CSNK1A1-201ENST00000261798 KIAA1107Q9UPP5 1409 aa13.01□□□□□ -0.33
CSNK1A1-201ENST00000261798 SPC24Q8NBT2 197 aa13□□□□□ -0.33
CSNK1A1-201ENST00000261798 BCL11BQ9C0K0 894 aaPredicted RBP13□□□□□ -0.33
CSNK1A1-201ENST00000261798 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
CSNK1A1-201ENST00000261798 PSMA5P28066 241 aa13□□□□□ -0.33
CSNK1A1-201ENST00000261798 NBPF1Q3BBV0 1214 aa13□□□□□ -0.33
CSNK1A1-201ENST00000261798 CHD1LQ86WJ1 897 aa13□□□□□ -0.33
CSNK1A1-201ENST00000261798 PRXQ9BXM0 1461 aa13□□□□□ -0.33
CSNK1A1-201ENST00000261798 CCP110O43303 1012 aa13□□□□□ -0.33
CSNK1A1-201ENST00000261798 AKAP17AQ02040 695 aaKnown RBP13□□□□□ -0.33
CSNK1A1-201ENST00000261798 TAF3Q5VWG9 929 aa13□□□□□ -0.33
CSNK1A1-201ENST00000261798 SYNE3Q6ZMZ3 975 aa13□□□□□ -0.33
CSNK1A1-201ENST00000261798 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
CSNK1A1-201ENST00000261798 SCAPERQ9BY12 1400 aa13□□□□□ -0.33
CSNK1A1-201ENST00000261798 CLSTN1O94985 981 aa13□□□□□ -0.33
CSNK1A1-201ENST00000261798 NOB1Q9ULX3 412 aaKnown RBP13□□□□□ -0.33
CSNK1A1-201ENST00000261798 PDCL2Q8N4E4 241 aa12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 FBXW7Q969H0 707 aa12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 AK7Q96M32 723 aa12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 PTPRGP23470 1445 aa12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 KINO60870 393 aaKnown RBP12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 TBC1D2Q9BYX2 928 aa12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 CFTRP13569 1480 aa12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 FGD5Q6ZNL6 1462 aa12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 TEFQ10587 303 aa12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 CSB-PGBD3P0DP91 1061 aa12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 DHX8Q14562 1220 aaKnown RBP12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 MPNDQ8N594 471 aa12.99□□□□□ -0.33
CSNK1A1-201ENST00000261798 GNAI3P08754 354 aa12.98□□□□□ -0.33
CSNK1A1-201ENST00000261798 SKAP1Q86WV1 359 aa12.98□□□□□ -0.33
CSNK1A1-201ENST00000261798 ERCC4Q92889 916 aaPredicted RBP12.98□□□□□ -0.33
CSNK1A1-201ENST00000261798 GGNBP2Q9H3C7 697 aa12.98□□□□□ -0.33
CSNK1A1-201ENST00000261798 RUFY1Q96T51 708 aa12.98□□□□□ -0.33
CSNK1A1-201ENST00000261798 CLCN1P35523 988 aa12.98□□□□□ -0.33
CSNK1A1-201ENST00000261798 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
CSNK1A1-201ENST00000261798 CNTROBQ8N137 903 aa12.98□□□□□ -0.33
CSNK1A1-201ENST00000261798 ZMYND15Q9H091 742 aa12.97□□□□□ -0.33
CSNK1A1-201ENST00000261798 HMOX1P09601 288 aa12.97□□□□□ -0.33
CSNK1A1-201ENST00000261798 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
CSNK1A1-201ENST00000261798 TIAM1Q13009 1591 aa12.97□□□□□ -0.33
CSNK1A1-201ENST00000261798 EIF2S2P20042 333 aaKnown RBP12.97□□□□□ -0.33
CSNK1A1-201ENST00000261798 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
CSNK1A1-201ENST00000261798 C1orf115Q9H7X2 142 aa12.97□□□□□ -0.33
CSNK1A1-201ENST00000261798 UBTFL1P0CB47 393 aaPredicted RBP12.96□□□□□ -0.33
CSNK1A1-201ENST00000261798 TSPYL4Q9UJ04 414 aa12.96□□□□□ -0.33
CSNK1A1-201ENST00000261798 LEKR1Q6ZMV7 388 aa12.96□□□□□ -0.33
CSNK1A1-201ENST00000261798 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
CSNK1A1-201ENST00000261798 OLFM4Q6UX06 510 aa12.96□□□□□ -0.34
CSNK1A1-201ENST00000261798 TRDNQ13061 729 aa12.95□□□□□ -0.34
CSNK1A1-201ENST00000261798 CYB5RLQ6IPT4 315 aa12.95□□□□□ -0.34
CSNK1A1-201ENST00000261798 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
CSNK1A1-201ENST00000261798 NECTIN2Q92692 538 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms