RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 POLR3AO14802 1390 aaPredicted RBP21.24■□□□□ 0.99
TM9SF1-201ENST00000261789 SBNO2Q9Y2G9 1366 aa21.24■□□□□ 0.99
TM9SF1-201ENST00000261789 COG6Q9Y2V7 657 aa21.23■□□□□ 0.99
TM9SF1-201ENST00000261789 MYO3AQ8NEV4 1616 aa21.23■□□□□ 0.99
TM9SF1-201ENST00000261789 FRAT1Q92837 279 aaPredicted RBP21.22■□□□□ 0.99
TM9SF1-201ENST00000261789 DDRGK1Q96HY6 314 aa21.22■□□□□ 0.99
TM9SF1-201ENST00000261789 LMTK2Q8IWU2 1503 aa21.22■□□□□ 0.99
TM9SF1-201ENST00000261789 CANXP27824 592 aaKnown RBP21.21■□□□□ 0.99
TM9SF1-201ENST00000261789 MTHFSP49914 203 aa21.21■□□□□ 0.99
TM9SF1-201ENST00000261789 SAFB2Q14151 953 aaKnown RBP eCLIP21.21■□□□□ 0.99
TM9SF1-201ENST00000261789 TCP11L2Q8N4U5 519 aa21.21■□□□□ 0.99
TM9SF1-201ENST00000261789 QRICH2Q9H0J4 1663 aa21.2■□□□□ 0.98
TM9SF1-201ENST00000261789 ADGRB1O14514 1584 aa21.19■□□□□ 0.98
TM9SF1-201ENST00000261789 FRMPD1Q5SYB0 1578 aa21.19■□□□□ 0.98
TM9SF1-201ENST00000261789 SETBP1Q9Y6X0 1596 aa21.19■□□□□ 0.98
TM9SF1-201ENST00000261789 RAPGEF3O95398 923 aa21.18■□□□□ 0.98
TM9SF1-201ENST00000261789 BCL2L13Q9BXK5 485 aa21.18■□□□□ 0.98
TM9SF1-201ENST00000261789 PPLO60437 1756 aa21.18■□□□□ 0.98
TM9SF1-201ENST00000261789 SHPRHQ149N8 1683 aa21.18■□□□□ 0.98
TM9SF1-201ENST00000261789 RUNDC1Q96C34 613 aa21.18■□□□□ 0.98
TM9SF1-201ENST00000261789 TNNQ9UQP3 1299 aa21.18■□□□□ 0.98
TM9SF1-201ENST00000261789 POGZQ7Z3K3 1410 aa21.17■□□□□ 0.98
TM9SF1-201ENST00000261789 GLI2P10070 1586 aa21.17■□□□□ 0.98
TM9SF1-201ENST00000261789 NEO1Q92859 1461 aa21.17■□□□□ 0.98
TM9SF1-201ENST00000261789 CABP2Q9NPB3 220 aa21.16■□□□□ 0.98
TM9SF1-201ENST00000261789 PPM1GO15355 546 aaPredicted RBP21.15■□□□□ 0.98
TM9SF1-201ENST00000261789 PDE3AQ14432 1141 aa21.15■□□□□ 0.98
TM9SF1-201ENST00000261789 NGEFQ8N5V2 710 aa21.15■□□□□ 0.98
TM9SF1-201ENST00000261789 ZC3H13Q5T200 1668 aaKnown RBP21.14■□□□□ 0.98
TM9SF1-201ENST00000261789 CGNL1Q0VF96 1302 aa21.14■□□□□ 0.98
TM9SF1-201ENST00000261789 CLUAP1Q96AJ1 413 aa21.14■□□□□ 0.98
TM9SF1-201ENST00000261789 RARSP54136 660 aaKnown RBP21.14■□□□□ 0.97
TM9SF1-201ENST00000261789 DAXXQ9UER7 740 aaPredicted RBP21.13■□□□□ 0.97
TM9SF1-201ENST00000261789 STK26Q9P289 416 aa21.13■□□□□ 0.97
TM9SF1-201ENST00000261789 MLH3Q9UHC1 1453 aa21.13■□□□□ 0.97
TM9SF1-201ENST00000261789 RLBP1P12271 317 aa21.12■□□□□ 0.97
TM9SF1-201ENST00000261789 USP35Q9P2H5 1018 aa21.11■□□□□ 0.97
TM9SF1-201ENST00000261789 ABCC3O15438 1527 aa21.11■□□□□ 0.97
TM9SF1-201ENST00000261789 U2AF1L5P0DN76 240 aaPredicted RBP21.11■□□□□ 0.97
TM9SF1-201ENST00000261789 U2AF1Q01081 240 aaKnown RBP eCLIP21.11■□□□□ 0.97
TM9SF1-201ENST00000261789 HECW2Q9P2P5 1572 aa21.1■□□□□ 0.97
TM9SF1-201ENST00000261789 SIGLEC1Q9BZZ2 1709 aa21.1■□□□□ 0.97
TM9SF1-201ENST00000261789 RPGRIP1LQ68CZ1 1315 aa21.1■□□□□ 0.97
TM9SF1-201ENST00000261789 EVC2Q86UK5 1308 aa21.1■□□□□ 0.97
TM9SF1-201ENST00000261789 DIP2BQ9P265 1576 aa21.1■□□□□ 0.97
TM9SF1-201ENST00000261789 PHF23Q9BUL5 403 aaPredicted RBP21.09■□□□□ 0.97
TM9SF1-201ENST00000261789 IQSEC2Q5JU85 1478 aa21.09■□□□□ 0.97
TM9SF1-201ENST00000261789 SEC24BO95487 1268 aa21.09■□□□□ 0.97
TM9SF1-201ENST00000261789 CFAP53Q96M91 514 aa21.09■□□□□ 0.97
TM9SF1-201ENST00000261789 VGFO15240 615 aaPredicted RBP21.08■□□□□ 0.97
TM9SF1-201ENST00000261789 IDI1Q13907 227 aa21.08■□□□□ 0.97
TM9SF1-201ENST00000261789 NFKBIBQ15653 356 aa21.08■□□□□ 0.97
TM9SF1-201ENST00000261789 PCDHB15Q9Y5E8 787 aa21.07■□□□□ 0.96
TM9SF1-201ENST00000261789 TULP4Q9NRJ4 1543 aa21.07■□□□□ 0.96
TM9SF1-201ENST00000261789 RICTORQ6R327 1708 aa21.06■□□□□ 0.96
TM9SF1-201ENST00000261789 WDR63Q8IWG1 891 aa21.06■□□□□ 0.96
TM9SF1-201ENST00000261789 GGNBP2Q9H3C7 697 aa21.05■□□□□ 0.96
TM9SF1-201ENST00000261789 ANKRD36BQ8N2N9 1353 aa21.05■□□□□ 0.96
TM9SF1-201ENST00000261789 SRPK2P78362 688 aaKnown RBP21.04■□□□□ 0.96
TM9SF1-201ENST00000261789 TSR2Q969E8 191 aaKnown RBP21.04■□□□□ 0.96
TM9SF1-201ENST00000261789 CAMSAP1Q5T5Y3 1602 aa21.04■□□□□ 0.96
TM9SF1-201ENST00000261789 USP19O94966 1318 aa21.03■□□□□ 0.96
TM9SF1-201ENST00000261789 ARHGEF28Q8N1W1 1705 aaKnown RBP21.03■□□□□ 0.96
TM9SF1-201ENST00000261789 U2SURPO15042 1029 aaKnown RBP21.03■□□□□ 0.96
TM9SF1-201ENST00000261789 NINLQ9Y2I6 1382 aa21.03■□□□□ 0.96
TM9SF1-201ENST00000261789 NEXMIFQ5QGS0 1516 aa21.02■□□□□ 0.96
TM9SF1-201ENST00000261789 A0A1W2PP64 1363 aa21.01■□□□□ 0.95
TM9SF1-201ENST00000261789 MINK1Q8N4C8 1332 aaPredicted RBP21■□□□□ 0.95
TM9SF1-201ENST00000261789 CCDC27Q2M243 656 aa21■□□□□ 0.95
TM9SF1-201ENST00000261789 USP32Q8NFA0 1604 aa21■□□□□ 0.95
TM9SF1-201ENST00000261789 FAM69CQ0P6D2 419 aa21■□□□□ 0.95
TM9SF1-201ENST00000261789 IL27Q8NEV9 243 aa20.99■□□□□ 0.95
TM9SF1-201ENST00000261789 MAPK8IP3Q9UPT6 1336 aa20.98■□□□□ 0.95
TM9SF1-201ENST00000261789 MYH16Q9H6N6 1097 aa20.98■□□□□ 0.95
TM9SF1-201ENST00000261789 DIP2CQ9Y2E4 1556 aa20.98■□□□□ 0.95
TM9SF1-201ENST00000261789 PIK3C2BO00750 1634 aa20.98■□□□□ 0.95
TM9SF1-201ENST00000261789 FRAT2O75474 233 aaPredicted RBP20.97■□□□□ 0.95
TM9SF1-201ENST00000261789 PMFBP1Q8TBY8 1022 aa20.97■□□□□ 0.95
TM9SF1-201ENST00000261789 PRAM1Q96QH2 718 aa20.97■□□□□ 0.95
TM9SF1-201ENST00000261789 PDZRN3Q9UPQ7 1066 aa20.97■□□□□ 0.95
TM9SF1-201ENST00000261789 PUS7Q96PZ0 661 aaKnown RBP20.96■□□□□ 0.95
TM9SF1-201ENST00000261789 NSD2O96028 1365 aa20.95■□□□□ 0.94
TM9SF1-201ENST00000261789 FYB1O15117 783 aa20.95■□□□□ 0.94
TM9SF1-201ENST00000261789 EXOSC9Q06265 439 aaKnown RBP20.95■□□□□ 0.94
TM9SF1-201ENST00000261789 PLEKHF1Q96S99 279 aa20.95■□□□□ 0.94
TM9SF1-201ENST00000261789 TSPOAP1O95153 1857 aa20.94■□□□□ 0.94
TM9SF1-201ENST00000261789 YEATS2Q9ULM3 1422 aa20.94■□□□□ 0.94
TM9SF1-201ENST00000261789 MYO5BQ9ULV0 1848 aa20.94■□□□□ 0.94
TM9SF1-201ENST00000261789 TMPOP42166 694 aaKnown RBP20.94■□□□□ 0.94
TM9SF1-201ENST00000261789 GSE1Q14687 1217 aa20.94■□□□□ 0.94
TM9SF1-201ENST00000261789 FBXO31Q5XUX0 539 aaPredicted RBP20.94■□□□□ 0.94
TM9SF1-201ENST00000261789 TRIM35Q9UPQ4 493 aa20.94■□□□□ 0.94
TM9SF1-201ENST00000261789 VIRMAQ69YN4 1812 aaKnown RBP20.94■□□□□ 0.94
TM9SF1-201ENST00000261789 ABCC11Q96J66 1382 aa20.93■□□□□ 0.94
TM9SF1-201ENST00000261789 POGKQ9P215 609 aa20.93■□□□□ 0.94
TM9SF1-201ENST00000261789 FBLN1P23142 703 aa20.93■□□□□ 0.94
TM9SF1-201ENST00000261789 MVPQ14764 893 aaKnown RBP20.93■□□□□ 0.94
TM9SF1-201ENST00000261789 FTSJ3Q8IY81 847 aaKnown RBP20.93■□□□□ 0.94
TM9SF1-201ENST00000261789 KIF13AQ9H1H9 1805 aa20.92■□□□□ 0.94
TM9SF1-201ENST00000261789 SMC4Q9NTJ3 1288 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms