RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
CUX2-201ENST00000261726 DDX58O95786 925 aaKnown RBP17.29■□□□□ 0.36
CUX2-201ENST00000261726 KIF21BO75037 1637 aa17.29■□□□□ 0.36
CUX2-201ENST00000261726 CAGE1Q8TC20 777 aa17.29■□□□□ 0.36
CUX2-201ENST00000261726 CCDC73Q6ZRK6 1079 aa17.28■□□□□ 0.36
CUX2-201ENST00000261726 NEUROD6Q96NK8 337 aa17.28■□□□□ 0.36
CUX2-201ENST00000261726 OFD1O75665 1012 aa17.28■□□□□ 0.36
CUX2-201ENST00000261726 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
CUX2-201ENST00000261726 MAP7D2Q96T17 732 aa17.28■□□□□ 0.36
CUX2-201ENST00000261726 ARGLU1Q9NWB6 273 aaPredicted RBP17.27■□□□□ 0.35
CUX2-201ENST00000261726 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.35
CUX2-201ENST00000261726 IGF1RP08069 1367 aa17.27■□□□□ 0.35
CUX2-201ENST00000261726 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.26■□□□□ 0.35
CUX2-201ENST00000261726 IKQ13123 557 aaPredicted RBP17.26■□□□□ 0.35
CUX2-201ENST00000261726 ACBD3Q9H3P7 528 aa17.26■□□□□ 0.35
CUX2-201ENST00000261726 EVC2Q86UK5 1308 aa17.26■□□□□ 0.35
CUX2-201ENST00000261726 APAF1O14727 1248 aa17.26■□□□□ 0.35
CUX2-201ENST00000261726 RIPK4P57078 832 aa17.26■□□□□ 0.35
CUX2-201ENST00000261726 AIMP1Q12904 312 aaKnown RBP17.26■□□□□ 0.35
CUX2-201ENST00000261726 OLFM4Q6UX06 510 aa17.26■□□□□ 0.35
CUX2-201ENST00000261726 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
CUX2-201ENST00000261726 TMEM132AQ24JP5 1023 aa17.25■□□□□ 0.35
CUX2-201ENST00000261726 RALYLQ86SE5 291 aaKnown RBP17.25■□□□□ 0.35
CUX2-201ENST00000261726 HSP90B2PQ58FF3 399 aa17.25■□□□□ 0.35
CUX2-201ENST00000261726 PSME1Q06323 249 aa17.24■□□□□ 0.35
CUX2-201ENST00000261726 PAF1Q8N7H5 531 aa17.24■□□□□ 0.35
CUX2-201ENST00000261726 INTS3Q68E01 1043 aaKnown RBP17.24■□□□□ 0.35
CUX2-201ENST00000261726 CCDC173Q0VFZ6 552 aa17.24■□□□□ 0.35
CUX2-201ENST00000261726 NOM1Q5C9Z4 860 aaKnown RBP17.24■□□□□ 0.35
CUX2-201ENST00000261726 DZIP1LQ8IYY4 767 aaKnown RBP17.23■□□□□ 0.35
CUX2-201ENST00000261726 BRMS1Q9HCU9 246 aa17.23■□□□□ 0.35
CUX2-201ENST00000261726 CHMP5Q9NZZ3 219 aa17.23■□□□□ 0.35
CUX2-201ENST00000261726 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
CUX2-201ENST00000261726 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
CUX2-201ENST00000261726 RIC3Q7Z5B4 369 aa17.22■□□□□ 0.35
CUX2-201ENST00000261726 TSPYL4Q9UJ04 414 aa17.22■□□□□ 0.35
CUX2-201ENST00000261726 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.35
CUX2-201ENST00000261726 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
CUX2-201ENST00000261726 ROCK1Q13464 1354 aa17.21■□□□□ 0.35
CUX2-201ENST00000261726 LNPKQ9C0E8 428 aa17.21■□□□□ 0.35
CUX2-201ENST00000261726 CCDC144AA2RUR9 1427 aa17.21■□□□□ 0.35
CUX2-201ENST00000261726 ERC2O15083 957 aa17.21■□□□□ 0.34
CUX2-201ENST00000261726 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.34
CUX2-201ENST00000261726 H0YHG0 523 aa17.2■□□□□ 0.34
CUX2-201ENST00000261726 TOPBP1Q92547 1522 aa17.2■□□□□ 0.34
CUX2-201ENST00000261726 CCDC191Q8NCU4 936 aa17.19■□□□□ 0.34
CUX2-201ENST00000261726 NAT10Q9H0A0 1025 aaKnown RBP17.19■□□□□ 0.34
CUX2-201ENST00000261726 FAM177BA6PVY3 158 aa17.19■□□□□ 0.34
CUX2-201ENST00000261726 HMOX1P09601 288 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 ATP2B1P20020 1258 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 PLCD4Q9BRC7 762 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 NUCB2P80303 420 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 SDF4Q9BRK5 362 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
CUX2-201ENST00000261726 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 RNF214Q8ND24 703 aa17.18■□□□□ 0.34
CUX2-201ENST00000261726 BRPF1P55201 1214 aaPredicted RBP17.18■□□□□ 0.34
CUX2-201ENST00000261726 XBP1P17861 261 aa17.17■□□□□ 0.34
CUX2-201ENST00000261726 SMC2O95347 1197 aa17.17■□□□□ 0.34
CUX2-201ENST00000261726 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
CUX2-201ENST00000261726 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
CUX2-201ENST00000261726 RDXP35241 583 aaKnown RBP17.16■□□□□ 0.34
CUX2-201ENST00000261726 UACAQ9BZF9 1416 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 NUTM2GQ5VZR2 741 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 HSP90AB4PQ58FF6 505 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 C22orf23Q9BZE7 217 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 WWC2Q6AWC2 1192 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 CDK5RAP3Q96JB5 506 aa17.15■□□□□ 0.34
CUX2-201ENST00000261726 MYO6Q9UM54 1294 aa17.14■□□□□ 0.33
CUX2-201ENST00000261726 DCAF8L1A6NGE4 600 aa17.14■□□□□ 0.33
CUX2-201ENST00000261726 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
CUX2-201ENST00000261726 DNAJC2Q99543 621 aaKnown RBP17.14■□□□□ 0.33
CUX2-201ENST00000261726 LAMC3Q9Y6N6 1575 aa17.14■□□□□ 0.33
CUX2-201ENST00000261726 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
CUX2-201ENST00000261726 NEFHP12036 1026 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
CUX2-201ENST00000261726 CCDC39Q9UFE4 941 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 NINLQ9Y2I6 1382 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 SYCP1Q15431 976 aa17.13■□□□□ 0.33
CUX2-201ENST00000261726 CCAR1Q8IX12 1150 aaKnown RBP17.13■□□□□ 0.33
CUX2-201ENST00000261726 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
CUX2-201ENST00000261726 MAGEC2Q9UBF1 373 aaPredicted RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
CUX2-201ENST00000261726 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
CUX2-201ENST00000261726 KRT18P05783 430 aaKnown RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 UBTFL1P0CB47 393 aaPredicted RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 ERCC4Q92889 916 aaPredicted RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 ANKRD62A6NC57 917 aa17.12■□□□□ 0.33
CUX2-201ENST00000261726 NASPP49321 788 aaPredicted RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.12■□□□□ 0.33
CUX2-201ENST00000261726 DHX37Q8IY37 1157 aaKnown RBP17.11■□□□□ 0.33
CUX2-201ENST00000261726 CCDC18Q5T9S5 1454 aa17.11■□□□□ 0.33
CUX2-201ENST00000261726 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
CUX2-201ENST00000261726 TSPYL1Q9H0U9 437 aa17.11■□□□□ 0.33
CUX2-201ENST00000261726 STK11IPQ8N1F8 1099 aa17.11■□□□□ 0.33
CUX2-201ENST00000261726 CNTROBQ8N137 903 aa17.11■□□□□ 0.33
CUX2-201ENST00000261726 ZBED9Q6R2W3 1325 aa17.11■□□□□ 0.33
CUX2-201ENST00000261726 PSMA5P28066 241 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms