RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 GIMAP7Q8NHV1 300 aa13.02□□□□□ -0.33
KPNA3-201ENST00000261667 TDO2P48775 406 aa13.02□□□□□ -0.33
KPNA3-201ENST00000261667 GPATCH8Q9UKJ3 1502 aaKnown RBP13.01□□□□□ -0.33
KPNA3-201ENST00000261667 GTF2F1P35269 517 aaKnown RBP eCLIP13.01□□□□□ -0.33
KPNA3-201ENST00000261667 CCDC9Q9Y3X0 531 aaKnown RBP13.01□□□□□ -0.33
KPNA3-201ENST00000261667 ZCCHC11Q5TAX3 1644 aaKnown RBP13.01□□□□□ -0.33
KPNA3-201ENST00000261667 KDM6BO15054 1643 aa13□□□□□ -0.33
KPNA3-201ENST00000261667 PREX2Q70Z35 1606 aa13□□□□□ -0.33
KPNA3-201ENST00000261667 TSPY4P0CV99 314 aa13□□□□□ -0.33
KPNA3-201ENST00000261667 TSPY10P0CW01 314 aa13□□□□□ -0.33
KPNA3-201ENST00000261667 ADGBQ8N7X0 1667 aa13□□□□□ -0.33
KPNA3-201ENST00000261667 CCDC112Q8NEF3 446 aa13□□□□□ -0.33
KPNA3-201ENST00000261667 MNS1Q8NEH6 495 aa13□□□□□ -0.33
KPNA3-201ENST00000261667 SKIDA1Q1XH10 827 aa13□□□□□ -0.33
KPNA3-201ENST00000261667 HSP90B2PQ58FF3 399 aa13□□□□□ -0.33
KPNA3-201ENST00000261667 NAIPQ13075 1403 aa13□□□□□ -0.33
KPNA3-201ENST00000261667 KDM5BQ9UGL1 1544 aa12.99□□□□□ -0.33
KPNA3-201ENST00000261667 UACAQ9BZF9 1416 aa12.99□□□□□ -0.33
KPNA3-201ENST00000261667 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
KPNA3-201ENST00000261667 OFD1O75665 1012 aa12.99□□□□□ -0.33
KPNA3-201ENST00000261667 MCCP23508 829 aa12.99□□□□□ -0.33
KPNA3-201ENST00000261667 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
KPNA3-201ENST00000261667 BANK1Q8NDB2 785 aa12.99□□□□□ -0.33
KPNA3-201ENST00000261667 SSR1P43307 286 aaKnown RBP12.99□□□□□ -0.33
KPNA3-201ENST00000261667 TPM4P67936 248 aa12.99□□□□□ -0.33
KPNA3-201ENST00000261667 CFAP44Q96MT7 982 aa12.99□□□□□ -0.33
KPNA3-201ENST00000261667 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
KPNA3-201ENST00000261667 HOMER1Q86YM7 354 aa12.98□□□□□ -0.33
KPNA3-201ENST00000261667 PTPRGP23470 1445 aa12.98□□□□□ -0.33
KPNA3-201ENST00000261667 C22orf23Q9BZE7 217 aa12.98□□□□□ -0.33
KPNA3-201ENST00000261667 DENND4BO75064 1496 aaPredicted RBP12.97□□□□□ -0.33
KPNA3-201ENST00000261667 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
KPNA3-201ENST00000261667 ST18O60284 1047 aa12.96□□□□□ -0.33
KPNA3-201ENST00000261667 OS9Q13438 667 aaPredicted RBP12.96□□□□□ -0.33
KPNA3-201ENST00000261667 NOL8Q76FK4 1167 aaKnown RBP12.96□□□□□ -0.33
KPNA3-201ENST00000261667 KNSTRNQ9Y448 316 aa12.96□□□□□ -0.33
KPNA3-201ENST00000261667 NUCB2P80303 420 aa12.96□□□□□ -0.34
KPNA3-201ENST00000261667 TTC37Q6PGP7 1564 aa12.96□□□□□ -0.34
KPNA3-201ENST00000261667 TPM3P06753 285 aa12.96□□□□□ -0.34
KPNA3-201ENST00000261667 CARD11Q9BXL7 1154 aa12.96□□□□□ -0.34
KPNA3-201ENST00000261667 CAMSAP2Q08AD1 1489 aa12.95□□□□□ -0.34
KPNA3-201ENST00000261667 GOLGA6L19H0YKK7 550 aa12.95□□□□□ -0.34
KPNA3-201ENST00000261667 NPM1P06748 294 aaKnown RBP eCLIP12.95□□□□□ -0.34
KPNA3-201ENST00000261667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.343e-7■■■□□ 17
KPNA3-201ENST00000261667 DAPK1P53355 1430 aa12.95□□□□□ -0.34
KPNA3-201ENST00000261667 CFDP1Q9UEE9 299 aaPredicted RBP12.94□□□□□ -0.34
KPNA3-201ENST00000261667 ABCC5O15440 1437 aa12.94□□□□□ -0.34
KPNA3-201ENST00000261667 ADGRL2O95490 1459 aa12.94□□□□□ -0.34
KPNA3-201ENST00000261667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.94□□□□□ -0.34
KPNA3-201ENST00000261667 CNPY4Q8N129 248 aa12.94□□□□□ -0.34
KPNA3-201ENST00000261667 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
KPNA3-201ENST00000261667 CLUAP1Q96AJ1 413 aa12.94□□□□□ -0.34
KPNA3-201ENST00000261667 PLEKHD1A6NEE1 506 aa12.93□□□□□ -0.34
KPNA3-201ENST00000261667 ROCK1Q13464 1354 aa12.93□□□□□ -0.34
KPNA3-201ENST00000261667 CTR9Q6PD62 1173 aa12.93□□□□□ -0.34
KPNA3-201ENST00000261667 SAMD9LQ8IVG5 1584 aa12.93□□□□□ -0.34
KPNA3-201ENST00000261667 PLCD4Q9BRC7 762 aa12.93□□□□□ -0.34
KPNA3-201ENST00000261667 TTLL5Q6EMB2 1281 aa12.92□□□□□ -0.34
KPNA3-201ENST00000261667 GOLGA2Q08379 1002 aa12.92□□□□□ -0.34
KPNA3-201ENST00000261667 CT47A1Q5JQC4 288 aaPredicted RBP12.92□□□□□ -0.34
KPNA3-201ENST00000261667 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
KPNA3-201ENST00000261667 TSPY26PQ9H489 355 aa12.92□□□□□ -0.34
KPNA3-201ENST00000261667 MYO5CQ9NQX4 1742 aa12.92□□□□□ -0.34
KPNA3-201ENST00000261667 BECN2A8MW95 431 aa12.92□□□□□ -0.34
KPNA3-201ENST00000261667 PRPF40AO75400 957 aaKnown RBP12.92□□□□□ -0.34
KPNA3-201ENST00000261667 PRIMPOLQ96LW4 560 aa12.92□□□□□ -0.34
KPNA3-201ENST00000261667 DMTNQ08495 405 aa12.91□□□□□ -0.34
KPNA3-201ENST00000261667 SPC24Q8NBT2 197 aa12.91□□□□□ -0.34
KPNA3-201ENST00000261667 ACBD3Q9H3P7 528 aa12.91□□□□□ -0.34
KPNA3-201ENST00000261667 SHANK2Q9UPX8 1470 aa12.91□□□□□ -0.34
KPNA3-201ENST00000261667 IBSPP21815 317 aaPredicted RBP12.91□□□□□ -0.34
KPNA3-201ENST00000261667 STAC3Q96MF2 364 aa12.91□□□□□ -0.34
KPNA3-201ENST00000261667 TMX1Q9H3N1 280 aa12.9□□□□□ -0.34
KPNA3-201ENST00000261667 POLR3GO15318 223 aaPredicted RBP12.9□□□□□ -0.34
KPNA3-201ENST00000261667 MCM5P33992 734 aa12.9□□□□□ -0.34
KPNA3-201ENST00000261667 GORABQ5T7V8 394 aa12.9□□□□□ -0.34
KPNA3-201ENST00000261667 NOL10Q9BSC4 688 aaKnown RBP12.9□□□□□ -0.34
KPNA3-201ENST00000261667 RASSF4Q9H2L5 321 aa12.9□□□□□ -0.34
KPNA3-201ENST00000261667 MNAT1P51948 309 aa12.9□□□□□ -0.35
KPNA3-201ENST00000261667 RALBP1Q15311 655 aa12.9□□□□□ -0.35
KPNA3-201ENST00000261667 ZNF622Q969S3 477 aaKnown RBP eCLIP12.9□□□□□ -0.358e-7■■■■□ 26.3
KPNA3-201ENST00000261667 SENP3Q9H4L4 574 aaPredicted RBP12.9□□□□□ -0.35
KPNA3-201ENST00000261667 MPHOSPH9Q99550 1183 aa12.89□□□□□ -0.35
KPNA3-201ENST00000261667 BCCIPQ9P287 314 aaKnown RBP eCLIP12.89□□□□□ -0.35
KPNA3-201ENST00000261667 MBD5Q9P267 1494 aa12.89□□□□□ -0.35
KPNA3-201ENST00000261667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.89□□□□□ -0.35
KPNA3-201ENST00000261667 KRT222Q8N1A0 295 aa12.89□□□□□ -0.35
KPNA3-201ENST00000261667 UTP14CQ5TAP6 766 aaKnown RBP12.89□□□□□ -0.35
KPNA3-201ENST00000261667 MAST1Q9Y2H9 1570 aa12.89□□□□□ -0.35
KPNA3-201ENST00000261667 SKAP1Q86WV1 359 aa12.88□□□□□ -0.35
KPNA3-201ENST00000261667 ITPRIPQ8IWB1 547 aa12.88□□□□□ -0.35
KPNA3-201ENST00000261667 C10orf67Q8IYJ2 551 aa12.88□□□□□ -0.35
KPNA3-201ENST00000261667 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
KPNA3-201ENST00000261667 MBD3O95983 291 aa12.88□□□□□ -0.35
KPNA3-201ENST00000261667 CDR1P51861 262 aa12.88□□□□□ -0.35
KPNA3-201ENST00000261667 CCDC191Q8NCU4 936 aa12.88□□□□□ -0.35
KPNA3-201ENST00000261667 ESF1Q9H501 851 aaKnown RBP12.87□□□□□ -0.35
KPNA3-201ENST00000261667 COG6Q9Y2V7 657 aa12.87□□□□□ -0.35
KPNA3-201ENST00000261667 CENPJQ9HC77 1338 aaPredicted RBP12.87□□□□□ -0.35
KPNA3-201ENST00000261667 APBB1O00213 710 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms