RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 AMER1Q5JTC6 1135 aaPredicted RBP9.07□□□□□ -0.96
CSDE1-201ENST00000261443 MAGI2Q86UL8 1455 aa9.07□□□□□ -0.96
CSDE1-201ENST00000261443 DDIT3P35638 169 aa9.07□□□□□ -0.96
CSDE1-201ENST00000261443 HNRNPMP52272 730 aaKnown RBP eCLIP9.07□□□□□ -0.96
CSDE1-201ENST00000261443 SMAP1Q8IYB5 467 aaPredicted RBP9.07□□□□□ -0.96
CSDE1-201ENST00000261443 MYO5CQ9NQX4 1742 aa9.06□□□□□ -0.96
CSDE1-201ENST00000261443 HSP90AB1P08238 724 aaKnown RBP9.06□□□□□ -0.96
CSDE1-201ENST00000261443 ARID3AQ99856 593 aa9.06□□□□□ -0.96
CSDE1-201ENST00000261443 CIZ1Q9ULV3 898 aaPredicted RBP9.06□□□□□ -0.96
CSDE1-201ENST00000261443 PIK3C2GO75747 1445 aa9.06□□□□□ -0.96
CSDE1-201ENST00000261443 NCOA3Q9Y6Q9 1424 aa9.06□□□□□ -0.96
CSDE1-201ENST00000261443 LAMC1P11047 1609 aa9.06□□□□□ -0.96
CSDE1-201ENST00000261443 ABCC2Q92887 1545 aa9.06□□□□□ -0.96
CSDE1-201ENST00000261443 UQCRHLA0A096LP55 91 aa9.05□□□□□ -0.96
CSDE1-201ENST00000261443 UQCRHP07919 91 aa9.05□□□□□ -0.96
CSDE1-201ENST00000261443 RLBP1P12271 317 aa9.05□□□□□ -0.96
CSDE1-201ENST00000261443 RAB3GAP1Q15042 981 aa9.05□□□□□ -0.96
CSDE1-201ENST00000261443 MTERF4Q7Z6M4 381 aaKnown RBP9.05□□□□□ -0.96
CSDE1-201ENST00000261443 NGEFQ8N5V2 710 aa9.05□□□□□ -0.96
CSDE1-201ENST00000261443 CCDC141Q6ZP82 1450 aa9.05□□□□□ -0.96
CSDE1-201ENST00000261443 PLXNC1O60486 1568 aa9.05□□□□□ -0.96
CSDE1-201ENST00000261443 SMC5Q8IY18 1101 aa9.05□□□□□ -0.96
CSDE1-201ENST00000261443 TNNQ9UQP3 1299 aa9.05□□□□□ -0.96
CSDE1-201ENST00000261443 IQGAP3Q86VI3 1631 aa9.05□□□□□ -0.96
CSDE1-201ENST00000261443 WDR7Q9Y4E6 1490 aa9.05□□□□□ -0.96
CSDE1-201ENST00000261443 RARSP54136 660 aaKnown RBP9.05□□□□□ -0.96
CSDE1-201ENST00000261443 GOLGA6L22H0YM25 854 aa9.04□□□□□ -0.96
CSDE1-201ENST00000261443 SNX21Q969T3 373 aa9.04□□□□□ -0.96
CSDE1-201ENST00000261443 ZCCHC11Q5TAX3 1644 aaKnown RBP9.04□□□□□ -0.96
CSDE1-201ENST00000261443 WWC1Q8IX03 1113 aa9.04□□□□□ -0.96
CSDE1-201ENST00000261443 PLEKHD1A6NEE1 506 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 TSPY4P0CV99 314 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 TSPY10P0CW01 314 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 BCL2L13Q9BXK5 485 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 A2MP01023 1474 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 SCAPERQ9BY12 1400 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 ASXL1Q8IXJ9 1541 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 XPCQ01831 940 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-201ENST00000261443 PRDM10Q9NQV6 1147 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 ZHX1Q9UKY1 873 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-201ENST00000261443 DDX49Q9Y6V7 483 aaKnown RBP9.03□□□□□ -0.96
CSDE1-201ENST00000261443 DYNC1I1O14576 645 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 FGD1P98174 961 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 HS1BP3Q53T59 392 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 FOXD4L1Q9NU39 408 aa9.03□□□□□ -0.96
CSDE1-201ENST00000261443 ZNF500O60304 480 aaPredicted RBP9.02□□□□□ -0.97
CSDE1-201ENST00000261443 NOL7Q9UMY1 257 aaKnown RBP9.02□□□□□ -0.97
CSDE1-201ENST00000261443 RBM25P49756 843 aaKnown RBP9.02□□□□□ -0.97
CSDE1-201ENST00000261443 EIF2AK4Q9P2K8 1649 aaKnown RBP9.01□□□□□ -0.97
CSDE1-201ENST00000261443 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
CSDE1-201ENST00000261443 KLHL40Q2TBA0 621 aa9.01□□□□□ -0.97
CSDE1-201ENST00000261443 CDCA8Q53HL2 280 aa9.01□□□□□ -0.97
CSDE1-201ENST00000261443 IBTKQ9P2D0 1353 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-201ENST00000261443 CSPP1Q1MSJ5 1256 aa9.01□□□□□ -0.97
CSDE1-201ENST00000261443 MVPQ14764 893 aaKnown RBP9.01□□□□□ -0.97
CSDE1-201ENST00000261443 RNF17Q9BXT8 1623 aaKnown RBP9□□□□□ -0.97
CSDE1-201ENST00000261443 SSFA2P28290 1259 aa9□□□□□ -0.97
CSDE1-201ENST00000261443 ABCC1P33527 1531 aa9□□□□□ -0.97
CSDE1-201ENST00000261443 NCLP19338 710 aaKnown RBP8.99□□□□□ -0.97
CSDE1-201ENST00000261443 FTSJ3Q8IY81 847 aaKnown RBP8.99□□□□□ -0.97
CSDE1-201ENST00000261443 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.99□□□□□ -0.97
CSDE1-201ENST00000261443 ARHGAP5Q13017 1502 aa8.99□□□□□ -0.97
CSDE1-201ENST00000261443 DMTNQ08495 405 aa8.99□□□□□ -0.97
CSDE1-201ENST00000261443 UTP14CQ5TAP6 766 aaKnown RBP8.99□□□□□ -0.97
CSDE1-201ENST00000261443 SASS6Q6UVJ0 657 aa8.99□□□□□ -0.97
CSDE1-201ENST00000261443 SYNMO15061 1565 aa8.99□□□□□ -0.97
CSDE1-201ENST00000261443 NPC1L1Q9UHC9 1359 aa8.99□□□□□ -0.97
CSDE1-201ENST00000261443 ZNF445P59923 1031 aa8.99□□□□□ -0.97
CSDE1-201ENST00000261443 CCDC94Q9BW85 323 aaPredicted RBP8.99□□□□□ -0.97
CSDE1-201ENST00000261443 ZKSCAN5Q9Y2L8 839 aa8.99□□□□□ -0.97
CSDE1-201ENST00000261443 RRP7AQ9Y3A4 280 aaKnown RBP8.99□□□□□ -0.97
CSDE1-201ENST00000261443 BAG4O95429 457 aaKnown RBP8.98□□□□□ -0.97
CSDE1-201ENST00000261443 ATP10AO60312 1499 aa8.98□□□□□ -0.97
CSDE1-201ENST00000261443 K7ELQ4 463 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-201ENST00000261443 CAVIN1Q6NZI2 390 aaKnown RBP8.98□□□□□ -0.97
CSDE1-201ENST00000261443 ZSCAN23Q3MJ62 389 aa8.97□□□□□ -0.97
CSDE1-201ENST00000261443 DZIP1LQ8IYY4 767 aaKnown RBP8.97□□□□□ -0.97
CSDE1-201ENST00000261443 PDLIM2Q96JY6 352 aa8.97□□□□□ -0.97
CSDE1-201ENST00000261443 RBSNQ9H1K0 784 aa8.97□□□□□ -0.97
CSDE1-201ENST00000261443 SENP3Q9H4L4 574 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-201ENST00000261443 TRAPPC8Q9Y2L5 1435 aa8.97□□□□□ -0.97
CSDE1-201ENST00000261443 CD2BP2O95400 341 aaKnown RBP8.97□□□□□ -0.97
CSDE1-201ENST00000261443 MCM5P33992 734 aa8.97□□□□□ -0.97
CSDE1-201ENST00000261443 TNNT2P45379 298 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-201ENST00000261443 HDAC1Q13547 482 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-201ENST00000261443 ZKSCAN2Q63HK3 967 aa8.97□□□□□ -0.97
CSDE1-201ENST00000261443 CLEC17AQ6ZS10 378 aa8.97□□□□□ -0.97
CSDE1-201ENST00000261443 DEPDC5O75140 1603 aa8.97□□□□□ -0.97
CSDE1-201ENST00000261443 MCTP1Q6DN14 999 aa8.97□□□□□ -0.97
CSDE1-201ENST00000261443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.97□□□□□ -0.971e-10■■□□□ 13.5
CSDE1-201ENST00000261443 SLC24A1O60721 1099 aa8.96□□□□□ -0.97
CSDE1-201ENST00000261443 UHRF1BP1LA0JNW5 1464 aa8.96□□□□□ -0.98
CSDE1-201ENST00000261443 ZSCAN20P17040 1043 aaPredicted RBP8.96□□□□□ -0.98
CSDE1-201ENST00000261443 GAS2L2Q8NHY3 880 aa8.96□□□□□ -0.98
CSDE1-201ENST00000261443 KIF2CQ99661 725 aa8.96□□□□□ -0.98
CSDE1-201ENST00000261443 PLCH2O75038 1416 aa8.96□□□□□ -0.98
CSDE1-201ENST00000261443 WDR63Q8IWG1 891 aa8.95□□□□□ -0.98
CSDE1-201ENST00000261443 TCP11L2Q8N4U5 519 aa8.95□□□□□ -0.98
CSDE1-201ENST00000261443 CCDC39Q9UFE4 941 aa8.95□□□□□ -0.98
CSDE1-201ENST00000261443 ZFYVE16Q7Z3T8 1539 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms