RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 UGGT1Q9NYU2 1555 aa20.51■□□□□ 0.87
SNCAIP-202ENST00000261368 ABCC2Q92887 1545 aa20.51■□□□□ 0.87
SNCAIP-202ENST00000261368 MINK1Q8N4C8 1332 aaPredicted RBP20.5■□□□□ 0.87
SNCAIP-202ENST00000261368 EVC2Q86UK5 1308 aa20.49■□□□□ 0.87
SNCAIP-202ENST00000261368 ELL2O00472 640 aaPredicted RBP20.49■□□□□ 0.87
SNCAIP-202ENST00000261368 WDR63Q8IWG1 891 aa20.48■□□□□ 0.87
SNCAIP-202ENST00000261368 FOXD4L1Q9NU39 408 aa20.48■□□□□ 0.87
SNCAIP-202ENST00000261368 MVPQ14764 893 aaKnown RBP20.47■□□□□ 0.87
SNCAIP-202ENST00000261368 CFAP65Q6ZU64 1925 aaKnown RBP20.47■□□□□ 0.87
SNCAIP-202ENST00000261368 TBC1D2Q9BYX2 928 aa20.47■□□□□ 0.87
SNCAIP-202ENST00000261368 NPC1L1Q9UHC9 1359 aa20.47■□□□□ 0.87
SNCAIP-202ENST00000261368 HSCBQ8IWL3 235 aa20.46■□□□□ 0.87
SNCAIP-202ENST00000261368 C22orf23Q9BZE7 217 aa20.46■□□□□ 0.87
SNCAIP-202ENST00000261368 RIPK4P57078 832 aa20.46■□□□□ 0.87
SNCAIP-202ENST00000261368 ERVK-7P63135 1459 aa20.46■□□□□ 0.87
SNCAIP-202ENST00000261368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.45■□□□□ 0.87
SNCAIP-202ENST00000261368 LNPKQ9C0E8 428 aa20.45■□□□□ 0.87
SNCAIP-202ENST00000261368 FANCAO15360 1455 aa20.45■□□□□ 0.86
SNCAIP-202ENST00000261368 SYNMO15061 1565 aa20.45■□□□□ 0.86
SNCAIP-202ENST00000261368 POLR3AO14802 1390 aaPredicted RBP20.45■□□□□ 0.86
SNCAIP-202ENST00000261368 PLXNC1O60486 1568 aa20.44■□□□□ 0.86
SNCAIP-202ENST00000261368 MADDQ8WXG6 1647 aa20.44■□□□□ 0.86
SNCAIP-202ENST00000261368 ADGRL1O94910 1474 aa20.44■□□□□ 0.86
SNCAIP-202ENST00000261368 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
SNCAIP-202ENST00000261368 USP19O94966 1318 aa20.43■□□□□ 0.86
SNCAIP-202ENST00000261368 LAMC1P11047 1609 aa20.42■□□□□ 0.86
SNCAIP-202ENST00000261368 SSH1Q8WYL5 1049 aa20.42■□□□□ 0.86
SNCAIP-202ENST00000261368 NINLQ9Y2I6 1382 aa20.42■□□□□ 0.86
SNCAIP-202ENST00000261368 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
SNCAIP-202ENST00000261368 L1TD1Q5T7N2 865 aaKnown RBP20.41■□□□□ 0.86
SNCAIP-202ENST00000261368 CLTCL1P53675 1640 aa20.41■□□□□ 0.86
SNCAIP-202ENST00000261368 TBC1D32Q96NH3 1257 aa20.41■□□□□ 0.86
SNCAIP-202ENST00000261368 VGFO15240 615 aaPredicted RBP20.41■□□□□ 0.86
SNCAIP-202ENST00000261368 TRPM2O94759 1503 aa20.4■□□□□ 0.86
SNCAIP-202ENST00000261368 DDX19BQ9UMR2 479 aa20.4■□□□□ 0.86
SNCAIP-202ENST00000261368 TRIM27P14373 513 aa20.4■□□□□ 0.86
SNCAIP-202ENST00000261368 C14orf93Q9H972 538 aaKnown RBP20.4■□□□□ 0.86
SNCAIP-202ENST00000261368 KDM5AP29375 1690 aaKnown RBP20.4■□□□□ 0.86
SNCAIP-202ENST00000261368 GOLGA6L3A6NEY3 463 aa20.4■□□□□ 0.86
SNCAIP-202ENST00000261368 FBLN1P23142 703 aa20.39■□□□□ 0.86
SNCAIP-202ENST00000261368 ABCC1P33527 1531 aa20.39■□□□□ 0.86
SNCAIP-202ENST00000261368 TMPOP42166 694 aaKnown RBP20.39■□□□□ 0.85
SNCAIP-202ENST00000261368 C1orf115Q9H7X2 142 aa20.39■□□□□ 0.85
SNCAIP-202ENST00000261368 CHD1O14646 1710 aa20.38■□□□□ 0.85
SNCAIP-202ENST00000261368 IPO8O15397 1037 aaKnown RBP20.38■□□□□ 0.85
SNCAIP-202ENST00000261368 TMEM57Q8N5G2 664 aa20.38■□□□□ 0.85
SNCAIP-202ENST00000261368 PTPRTO14522 1441 aa20.38■□□□□ 0.85
SNCAIP-202ENST00000261368 HMOX1P09601 288 aa20.38■□□□□ 0.85
SNCAIP-202ENST00000261368 ANKRD45Q5TZF3 282 aa20.37■□□□□ 0.85
SNCAIP-202ENST00000261368 ATF7IPQ6VMQ6 1270 aa20.37■□□□□ 0.85
SNCAIP-202ENST00000261368 TERF2IPQ9NYB0 399 aa20.37■□□□□ 0.85
SNCAIP-202ENST00000261368 RAPGEF3O95398 923 aa20.36■□□□□ 0.85
SNCAIP-202ENST00000261368 DIAPH1O60610 1272 aaKnown RBP20.36■□□□□ 0.85
SNCAIP-202ENST00000261368 RTEL1-TNFRSF6BF6WH68 1400 aa20.36■□□□□ 0.85
SNCAIP-202ENST00000261368 APBB1O00213 710 aa20.35■□□□□ 0.85
SNCAIP-202ENST00000261368 HDGFL2Q7Z4V5 671 aaPredicted RBP20.35■□□□□ 0.85
SNCAIP-202ENST00000261368 THUMPD2Q9BTF0 503 aaKnown RBP20.35■□□□□ 0.85
SNCAIP-202ENST00000261368 AAMPQ13685 434 aa20.35■□□□□ 0.85
SNCAIP-202ENST00000261368 CHMP5Q9NZZ3 219 aa20.34■□□□□ 0.85
SNCAIP-202ENST00000261368 PRAM1Q96QH2 718 aa20.34■□□□□ 0.85
SNCAIP-202ENST00000261368 ATP7AQ04656 1500 aa20.33■□□□□ 0.85
SNCAIP-202ENST00000261368 RNF17Q9BXT8 1623 aaKnown RBP20.33■□□□□ 0.85
SNCAIP-202ENST00000261368 NAP1L5Q96NT1 182 aaPredicted RBP20.33■□□□□ 0.84
SNCAIP-202ENST00000261368 IQGAP1P46940 1657 aa20.32■□□□□ 0.84
SNCAIP-202ENST00000261368 MCM4P33991 863 aa20.32■□□□□ 0.84
SNCAIP-202ENST00000261368 TRAK2O60296 914 aa20.31■□□□□ 0.84
SNCAIP-202ENST00000261368 ZCCHC11Q5TAX3 1644 aaKnown RBP20.31■□□□□ 0.84
SNCAIP-202ENST00000261368 PRKAR2BP31323 418 aa20.3■□□□□ 0.84
SNCAIP-202ENST00000261368 ZFYVE16Q7Z3T8 1539 aa20.3■□□□□ 0.84
SNCAIP-202ENST00000261368 SPHKAPQ2M3C7 1700 aa20.3■□□□□ 0.84
SNCAIP-202ENST00000261368 CABP1Q9NZU7 370 aa20.29■□□□□ 0.84
SNCAIP-202ENST00000261368 SOX12O15370 315 aa20.28■□□□□ 0.84
SNCAIP-202ENST00000261368 PNNQ9H307 717 aaKnown RBP20.28■□□□□ 0.84
SNCAIP-202ENST00000261368 NCLP19338 710 aaKnown RBP20.27■□□□□ 0.84
SNCAIP-202ENST00000261368 IDI1Q13907 227 aa20.27■□□□□ 0.84
SNCAIP-202ENST00000261368 CCDC27Q2M243 656 aa20.27■□□□□ 0.84
SNCAIP-202ENST00000261368 FAM43AQ8N2R8 423 aa20.27■□□□□ 0.84
SNCAIP-202ENST00000261368 PANK2Q9BZ23 570 aa20.27■□□□□ 0.84
SNCAIP-202ENST00000261368 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
SNCAIP-202ENST00000261368 KIF16BQ96L93 1317 aa20.26■□□□□ 0.83
SNCAIP-202ENST00000261368 PRKCSHP14314 528 aaPredicted RBP20.26■□□□□ 0.83
SNCAIP-202ENST00000261368 MLECQ14165 292 aa20.26■□□□□ 0.83
SNCAIP-202ENST00000261368 TRIM44Q96DX7 344 aaPredicted RBP20.25■□□□□ 0.83
SNCAIP-202ENST00000261368 TRIM35Q9UPQ4 493 aa20.25■□□□□ 0.83
SNCAIP-202ENST00000261368 FYB1O15117 783 aa20.24■□□□□ 0.83
SNCAIP-202ENST00000261368 ABCA6Q8N139 1617 aa20.24■□□□□ 0.83
SNCAIP-202ENST00000261368 ANKRD36BQ8N2N9 1353 aa20.24■□□□□ 0.83
SNCAIP-202ENST00000261368 ANTXR1Q9H6X2 564 aa20.24■□□□□ 0.83
SNCAIP-202ENST00000261368 MAP3K4Q9Y6R4 1608 aa20.23■□□□□ 0.83
SNCAIP-202ENST00000261368 CHD1LQ86WJ1 897 aa20.23■□□□□ 0.83
SNCAIP-202ENST00000261368 CDK19Q9BWU1 502 aa20.23■□□□□ 0.83
SNCAIP-202ENST00000261368 TET3O43151 1660 aa20.22■□□□□ 0.83
SNCAIP-202ENST00000261368 A0A1W2PP64 1363 aa20.22■□□□□ 0.83
SNCAIP-202ENST00000261368 RPGRIP1LQ68CZ1 1315 aa20.21■□□□□ 0.83
SNCAIP-202ENST00000261368 XRCC6P12956 609 aaKnown RBP eCLIP20.21■□□□□ 0.83
SNCAIP-202ENST00000261368 CEP152O94986 1710 aa20.21■□□□□ 0.83
SNCAIP-202ENST00000261368 CT47B1P0C2W7 299 aaPredicted RBP20.21■□□□□ 0.83
SNCAIP-202ENST00000261368 MYOM1P52179 1685 aa20.21■□□□□ 0.83
SNCAIP-202ENST00000261368 ASXL2Q76L83 1435 aa20.21■□□□□ 0.83
SNCAIP-202ENST00000261368 SBNO2Q9Y2G9 1366 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms