RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 WDR63Q8IWG1 891 aa29.95■■■□□ 2.38
PREB-201ENST00000260643 RUNDC1Q96C34 613 aa29.95■■■□□ 2.38
PREB-201ENST00000260643 KIF1BO60333 1816 aa29.93■■■□□ 2.38
PREB-201ENST00000260643 CCDC27Q2M243 656 aa29.92■■■□□ 2.38
PREB-201ENST00000260643 USP32Q8NFA0 1604 aa29.91■■■□□ 2.38
PREB-201ENST00000260643 ANTXR1Q9H6X2 564 aa29.9■■■□□ 2.38
PREB-201ENST00000260643 EFCAB6Q5THR3 1501 aa29.9■■■□□ 2.38
PREB-201ENST00000260643 UGGT1Q9NYU2 1555 aa29.9■■■□□ 2.38
PREB-201ENST00000260643 NSD3Q9BZ95 1437 aa29.89■■■□□ 2.37
PREB-201ENST00000260643 FAM43AQ8N2R8 423 aa29.88■■■□□ 2.37
PREB-201ENST00000260643 ABCA9Q8IUA7 1624 aa29.88■■■□□ 2.37
PREB-201ENST00000260643 PRKCSHP14314 528 aaPredicted RBP29.88■■■□□ 2.37
PREB-201ENST00000260643 TBC1D32Q96NH3 1257 aa29.88■■■□□ 2.37
PREB-201ENST00000260643 PCDHB15Q9Y5E8 787 aa29.87■■■□□ 2.37
PREB-201ENST00000260643 MORC1Q86VD1 984 aa29.87■■■□□ 2.37
PREB-201ENST00000260643 TCP11L2Q8N4U5 519 aa29.86■■■□□ 2.37
PREB-201ENST00000260643 KIF3BO15066 747 aa29.86■■■□□ 2.37
PREB-201ENST00000260643 UPF2Q9HAU5 1272 aaKnown RBP29.86■■■□□ 2.37
PREB-201ENST00000260643 LMTK2Q8IWU2 1503 aa29.85■■■□□ 2.37
PREB-201ENST00000260643 MROH2AA6NES4 1674 aa29.85■■■□□ 2.37
PREB-201ENST00000260643 ZC3H13Q5T200 1668 aaKnown RBP29.85■■■□□ 2.37
PREB-201ENST00000260643 ZNF518AQ6AHZ1 1483 aa29.85■■■□□ 2.37
PREB-201ENST00000260643 FANCAO15360 1455 aa29.84■■■□□ 2.37
PREB-201ENST00000260643 ADGRB3O60242 1522 aa29.83■■■□□ 2.37
PREB-201ENST00000260643 RLBP1P12271 317 aa29.83■■■□□ 2.37
PREB-201ENST00000260643 RWDD1Q9H446 243 aaPredicted RBP29.82■■■□□ 2.36
PREB-201ENST00000260643 PDZRN3Q9UPQ7 1066 aa29.82■■■□□ 2.36
PREB-201ENST00000260643 POGKQ9P215 609 aa29.81■■■□□ 2.36
PREB-201ENST00000260643 ADGRL1O94910 1474 aa29.79■■■□□ 2.36
PREB-201ENST00000260643 PPRC1Q5VV67 1664 aaKnown RBP29.78■■■□□ 2.36
PREB-201ENST00000260643 ADGRB1O14514 1584 aa29.77■■■□□ 2.36
PREB-201ENST00000260643 TBC1D2Q9BYX2 928 aa29.77■■■□□ 2.36
PREB-201ENST00000260643 MYH16Q9H6N6 1097 aa29.77■■■□□ 2.36
PREB-201ENST00000260643 RRP7AQ9Y3A4 280 aaKnown RBP29.77■■■□□ 2.36
PREB-201ENST00000260643 NOS1P29475 1434 aa29.77■■■□□ 2.36
PREB-201ENST00000260643 QRICH2Q9H0J4 1663 aa29.76■■■□□ 2.36
PREB-201ENST00000260643 PUS7Q96PZ0 661 aaKnown RBP29.76■■■□□ 2.35
PREB-201ENST00000260643 CT47B1P0C2W7 299 aaPredicted RBP29.76■■■□□ 2.35
PREB-201ENST00000260643 NEUROD2Q15784 382 aa29.76■■■□□ 2.35
PREB-201ENST00000260643 L1TD1Q5T7N2 865 aaKnown RBP29.76■■■□□ 2.35
PREB-201ENST00000260643 SLKQ9H2G2 1235 aaPredicted RBP29.76■■■□□ 2.35
PREB-201ENST00000260643 CFAP53Q96M91 514 aa29.75■■■□□ 2.35
PREB-201ENST00000260643 C14orf93Q9H972 538 aaKnown RBP29.75■■■□□ 2.35
PREB-201ENST00000260643 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.75■■■□□ 2.35
PREB-201ENST00000260643 ADGRB2O60241 1585 aa29.74■■■□□ 2.35
PREB-201ENST00000260643 SLC12A5Q9H2X9 1139 aa29.74■■■□□ 2.35
PREB-201ENST00000260643 TNNQ9UQP3 1299 aa29.74■■■□□ 2.35
PREB-201ENST00000260643 MVPQ14764 893 aaKnown RBP29.74■■■□□ 2.35
PREB-201ENST00000260643 NSD2O96028 1365 aa29.73■■■□□ 2.35
PREB-201ENST00000260643 MTHFSP49914 203 aa29.72■■■□□ 2.35
PREB-201ENST00000260643 PPLO60437 1756 aa29.69■■■□□ 2.34
PREB-201ENST00000260643 RSPH6AQ9H0K4 717 aa29.69■■■□□ 2.34
PREB-201ENST00000260643 ZKSCAN2Q63HK3 967 aa29.68■■■□□ 2.34
PREB-201ENST00000260643 TNNT2P45379 298 aaPredicted RBP29.67■■■□□ 2.34
PREB-201ENST00000260643 BCL2L13Q9BXK5 485 aa29.67■■■□□ 2.34
PREB-201ENST00000260643 TRAK1Q9UPV9 953 aa29.67■■■□□ 2.34
PREB-201ENST00000260643 DZIP1LQ8IYY4 767 aaKnown RBP29.65■■■□□ 2.34
PREB-201ENST00000260643 HDAC1Q13547 482 aaPredicted RBP29.64■■■□□ 2.34
PREB-201ENST00000260643 KIDINS220Q9ULH0 1771 aa29.64■■■□□ 2.34
PREB-201ENST00000260643 RPGRIP1LQ68CZ1 1315 aa29.64■■■□□ 2.34
PREB-201ENST00000260643 ANKRD36BQ8N2N9 1353 aa29.64■■■□□ 2.34
PREB-201ENST00000260643 FSD2A1L4K1 749 aa29.6■■■□□ 2.33
PREB-201ENST00000260643 MCM4P33991 863 aa29.6■■■□□ 2.33
PREB-201ENST00000260643 FTSJ3Q8IY81 847 aaKnown RBP29.59■■■□□ 2.33
PREB-201ENST00000260643 C22orf23Q9BZE7 217 aa29.59■■■□□ 2.33
PREB-201ENST00000260643 NPATQ14207 1427 aa29.58■■■□□ 2.33
PREB-201ENST00000260643 CHMP5Q9NZZ3 219 aa29.57■■■□□ 2.32
PREB-201ENST00000260643 U2AF1L5P0DN76 240 aaPredicted RBP29.57■■■□□ 2.32
PREB-201ENST00000260643 U2AF1Q01081 240 aaKnown RBP eCLIP29.57■■■□□ 2.32
PREB-201ENST00000260643 TULP4Q9NRJ4 1543 aa29.57■■■□□ 2.32
PREB-201ENST00000260643 EVC2Q86UK5 1308 aa29.56■■■□□ 2.32
PREB-201ENST00000260643 DDX19BQ9UMR2 479 aa29.56■■■□□ 2.32
PREB-201ENST00000260643 SMC5Q8IY18 1101 aa29.55■■■□□ 2.32
PREB-201ENST00000260643 IL16Q14005 1332 aa29.55■■■□□ 2.32
PREB-201ENST00000260643 PLEKHF1Q96S99 279 aa29.54■■■□□ 2.32
PREB-201ENST00000260643 GLI2P10070 1586 aa29.54■■■□□ 2.32
PREB-201ENST00000260643 TRIM27P14373 513 aa29.53■■■□□ 2.32
PREB-201ENST00000260643 CD109Q6YHK3 1445 aa29.52■■■□□ 2.32
PREB-201ENST00000260643 ABCC11Q96J66 1382 aa29.52■■■□□ 2.32
PREB-201ENST00000260643 TMEM132EQ6IEE7 984 aa29.52■■■□□ 2.32
PREB-201ENST00000260643 GOLGA6L3A6NEY3 463 aa29.52■■■□□ 2.32
PREB-201ENST00000260643 SMC4Q9NTJ3 1288 aa29.52■■■□□ 2.32
PREB-201ENST00000260643 ARHGEF28Q8N1W1 1705 aaKnown RBP29.52■■■□□ 2.32
PREB-201ENST00000260643 ATF7IPQ6VMQ6 1270 aa29.51■■■□□ 2.31
PREB-201ENST00000260643 COL3A1P02461 1466 aaPredicted RBP29.51■■■□□ 2.31
PREB-201ENST00000260643 CHGAP10645 457 aaKnown RBP29.5■■■□□ 2.31
PREB-201ENST00000260643 XRCC6P12956 609 aaKnown RBP eCLIP29.5■■■□□ 2.31
PREB-201ENST00000260643 RRAGDQ9NQL2 400 aaPredicted RBP29.5■■■□□ 2.31
PREB-201ENST00000260643 EXOSC9Q06265 439 aaKnown RBP29.5■■■□□ 2.31
PREB-201ENST00000260643 NCOA3Q9Y6Q9 1424 aa29.5■■■□□ 2.31
PREB-201ENST00000260643 TSR2Q969E8 191 aaKnown RBP29.49■■■□□ 2.31
PREB-201ENST00000260643 TRIM35Q9UPQ4 493 aa29.49■■■□□ 2.31
PREB-201ENST00000260643 TMPOP42166 694 aaKnown RBP29.48■■■□□ 2.31
PREB-201ENST00000260643 SSH1Q8WYL5 1049 aa29.48■■■□□ 2.31
PREB-201ENST00000260643 MFAP1P55081 439 aaKnown RBP29.47■■■□□ 2.31
PREB-201ENST00000260643 HECW2Q9P2P5 1572 aa29.46■■■□□ 2.31
PREB-201ENST00000260643 ZNF692Q9BU19 519 aaPredicted RBP29.46■■■□□ 2.31
PREB-201ENST00000260643 ZBTB40Q9NUA8 1239 aa29.46■■■□□ 2.31
PREB-201ENST00000260643 DDIT3P35638 169 aa29.45■■■□□ 2.31
PREB-201ENST00000260643 RBM25P49756 843 aaKnown RBP29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms