RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 LAMC1P11047 1609 aa25.01■■□□□ 1.59
CGREF1-201ENST00000260595 ZNF772Q68DY9 489 aaPredicted RBP25.01■■□□□ 1.59
CGREF1-201ENST00000260595 WAPLQ7Z5K2 1190 aa25.01■■□□□ 1.59
CGREF1-201ENST00000260595 SOS2Q07890 1332 aaPredicted RBP25■■□□□ 1.59
CGREF1-201ENST00000260595 NRXN1Q9ULB1 1477 aa24.98■■□□□ 1.59
CGREF1-201ENST00000260595 C14orf93Q9H972 538 aaKnown RBP24.98■■□□□ 1.59
CGREF1-201ENST00000260595 CDC42BPGQ6DT37 1551 aa24.97■■□□□ 1.59
CGREF1-201ENST00000260595 PLEKHH1Q9ULM0 1364 aa24.97■■□□□ 1.59
CGREF1-201ENST00000260595 YTHDC2Q9H6S0 1430 aaKnown RBP24.96■■□□□ 1.59
CGREF1-201ENST00000260595 MYOM2P54296 1465 aa24.95■■□□□ 1.58
CGREF1-201ENST00000260595 CFAP70Q5T0N1 1121 aa24.94■■□□□ 1.58
CGREF1-201ENST00000260595 SIRT1Q96EB6 747 aa24.94■■□□□ 1.58
CGREF1-201ENST00000260595 KNDC1Q76NI1 1749 aa24.93■■□□□ 1.58
CGREF1-201ENST00000260595 ESCO1Q5FWF5 840 aa24.93■■□□□ 1.58
CGREF1-201ENST00000260595 AFF2P51816 1311 aa24.92■■□□□ 1.58
CGREF1-201ENST00000260595 HRCP23327 699 aa24.92■■□□□ 1.58
CGREF1-201ENST00000260595 C8orf37Q96NL8 207 aa24.89■■□□□ 1.58
CGREF1-201ENST00000260595 NPHP3Q7Z494 1330 aa24.88■■□□□ 1.57
CGREF1-201ENST00000260595 NUTM2FA1L443 756 aa24.88■■□□□ 1.57
CGREF1-201ENST00000260595 RXRBP28702 533 aa24.88■■□□□ 1.57
CGREF1-201ENST00000260595 DHX57Q6P158 1386 aaKnown RBP24.88■■□□□ 1.57
CGREF1-201ENST00000260595 FOXO3O43524 673 aa24.87■■□□□ 1.57
CGREF1-201ENST00000260595 PXDNQ92626 1479 aa24.86■■□□□ 1.57
CGREF1-201ENST00000260595 ADAMTS2O95450 1211 aa24.85■■□□□ 1.57
CGREF1-201ENST00000260595 XPCQ01831 940 aaPredicted RBP24.82■■□□□ 1.56
CGREF1-201ENST00000260595 NGLY1Q96IV0 654 aa24.82■■□□□ 1.56
CGREF1-201ENST00000260595 FMN2Q9NZ56 1722 aa24.82■■□□□ 1.56
CGREF1-201ENST00000260595 COL22A1Q8NFW1 1626 aaPredicted RBP24.82■■□□□ 1.56
CGREF1-201ENST00000260595 CDK12Q9NYV4 1490 aaPredicted RBP24.82■■□□□ 1.56
CGREF1-201ENST00000260595 PRAM1Q96QH2 718 aa24.81■■□□□ 1.56
CGREF1-201ENST00000260595 QTRT2Q9H974 415 aaKnown RBP24.81■■□□□ 1.56
CGREF1-201ENST00000260595 ADGRB1O14514 1584 aa24.8■■□□□ 1.56
CGREF1-201ENST00000260595 DCAF11Q8TEB1 546 aa24.79■■□□□ 1.56
CGREF1-201ENST00000260595 DLC1Q96QB1 1528 aa24.79■■□□□ 1.56
CGREF1-201ENST00000260595 KDM2AQ9Y2K7 1162 aa24.78■■□□□ 1.56
CGREF1-201ENST00000260595 RBM6P78332 1123 aaKnown RBP24.77■■□□□ 1.56
CGREF1-201ENST00000260595 SAFB2Q14151 953 aaKnown RBP eCLIP24.77■■□□□ 1.56
CGREF1-201ENST00000260595 FNBP4Q8N3X1 1017 aaPredicted RBP24.77■■□□□ 1.56
CGREF1-201ENST00000260595 STAC3Q96MF2 364 aa24.77■■□□□ 1.56
CGREF1-201ENST00000260595 UPF1Q92900 1129 aaKnown RBP eCLIP24.76■■□□□ 1.55
CGREF1-201ENST00000260595 POGKQ9P215 609 aa24.74■■□□□ 1.55
CGREF1-201ENST00000260595 USP21Q9UK80 565 aa24.74■■□□□ 1.55
CGREF1-201ENST00000260595 SPATA31A3Q5VYP0 1347 aa24.74■■□□□ 1.55
CGREF1-201ENST00000260595 KIF1AQ12756 1690 aa24.73■■□□□ 1.55
CGREF1-201ENST00000260595 KRT28Q7Z3Y7 464 aa24.73■■□□□ 1.55
CGREF1-201ENST00000260595 PHF8Q9UPP1 1060 aa24.73■■□□□ 1.55
CGREF1-201ENST00000260595 TRAK1Q9UPV9 953 aa24.73■■□□□ 1.55
CGREF1-201ENST00000260595 RGS12O14924 1447 aa24.72■■□□□ 1.55
CGREF1-201ENST00000260595 TRPC5Q9UL62 973 aaPredicted RBP24.69■■□□□ 1.54
CGREF1-201ENST00000260595 ADGRB2O60241 1585 aa24.68■■□□□ 1.54
CGREF1-201ENST00000260595 ATRNO75882 1429 aa24.68■■□□□ 1.54
CGREF1-201ENST00000260595 ANKARQ7Z5J8 1434 aa24.68■■□□□ 1.54
CGREF1-201ENST00000260595 RGPD8O14715 1765 aaPredicted RBP24.67■■□□□ 1.54
CGREF1-201ENST00000260595 BCL9LQ86UU0 1499 aa24.67■■□□□ 1.54
CGREF1-201ENST00000260595 HIRIP3Q9BW71 556 aaPredicted RBP24.66■■□□□ 1.54
CGREF1-201ENST00000260595 USP32Q8NFA0 1604 aa24.65■■□□□ 1.54
CGREF1-201ENST00000260595 PSME1Q06323 249 aa24.65■■□□□ 1.54
CGREF1-201ENST00000260595 MINK1Q8N4C8 1332 aaPredicted RBP24.64■■□□□ 1.54
CGREF1-201ENST00000260595 TNS3Q68CZ2 1445 aa24.64■■□□□ 1.54
CGREF1-201ENST00000260595 SBNO1A3KN83 1393 aa24.64■■□□□ 1.53
CGREF1-201ENST00000260595 PMFBP1Q8TBY8 1022 aa24.63■■□□□ 1.53
CGREF1-201ENST00000260595 PRR36Q9H6K5 1346 aa24.62■■□□□ 1.53
CGREF1-201ENST00000260595 MARF1Q9Y4F3 1742 aaKnown RBP24.61■■□□□ 1.53
CGREF1-201ENST00000260595 WASLO00401 505 aaPredicted RBP24.61■■□□□ 1.53
CGREF1-201ENST00000260595 CABLES1Q8TDN4 633 aa24.59■■□□□ 1.53
CGREF1-201ENST00000260595 SLIT2O94813 1529 aa24.59■■□□□ 1.53
CGREF1-201ENST00000260595 TULP4Q9NRJ4 1543 aa24.58■■□□□ 1.53
CGREF1-201ENST00000260595 EIF3AQ14152 1382 aaKnown RBP24.57■■□□□ 1.52
CGREF1-201ENST00000260595 GJD4Q96KN9 370 aaPredicted RBP24.57■■□□□ 1.52
CGREF1-201ENST00000260595 ARHGEF10O15013 1369 aa24.56■■□□□ 1.52
CGREF1-201ENST00000260595 UNC5CLQ8IV45 518 aa24.56■■□□□ 1.52
CGREF1-201ENST00000260595 LMOD2Q6P5Q4 547 aa24.54■■□□□ 1.52
CGREF1-201ENST00000260595 ARHGEF28Q8N1W1 1705 aaKnown RBP24.54■■□□□ 1.52
CGREF1-201ENST00000260595 PLEKHG5O94827 1062 aa24.52■■□□□ 1.52
CGREF1-201ENST00000260595 HAP1P54257 671 aaPredicted RBP24.52■■□□□ 1.52
CGREF1-201ENST00000260595 NBPF1Q3BBV0 1214 aa24.52■■□□□ 1.52
CGREF1-201ENST00000260595 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.52■■□□□ 1.52
CGREF1-201ENST00000260595 TRPM3Q9HCF6 1732 aaPredicted RBP24.51■■□□□ 1.51
CGREF1-201ENST00000260595 GPRASP1Q5JY77 1395 aa24.51■■□□□ 1.51
CGREF1-201ENST00000260595 ATAD2Q6PL18 1390 aa24.51■■□□□ 1.51
CGREF1-201ENST00000260595 KIAA1210Q9ULL0 1709 aa24.49■■□□□ 1.51
CGREF1-201ENST00000260595 NUDT16Q96DE0 195 aaKnown RBP24.49■■□□□ 1.51
CGREF1-201ENST00000260595 ATP7BP35670 1465 aa24.49■■□□□ 1.51
CGREF1-201ENST00000260595 RALGAPBQ86X10 1494 aa24.49■■□□□ 1.51
CGREF1-201ENST00000260595 FAM83GA6ND36 823 aa24.48■■□□□ 1.51
CGREF1-201ENST00000260595 NGDNQ8NEJ9 315 aaKnown RBP24.48■■□□□ 1.51
CGREF1-201ENST00000260595 ABCA3Q99758 1704 aa24.48■■□□□ 1.51
CGREF1-201ENST00000260595 CDK19Q9BWU1 502 aa24.48■■□□□ 1.51
CGREF1-201ENST00000260595 GLI3P10071 1580 aa24.47■■□□□ 1.51
CGREF1-201ENST00000260595 VPS72Q15906 364 aa24.46■■□□□ 1.51
CGREF1-201ENST00000260595 ALS2Q96Q42 1657 aa24.46■■□□□ 1.51
CGREF1-201ENST00000260595 L3MBTL2Q969R5 705 aa24.43■■□□□ 1.5
CGREF1-201ENST00000260595 SIN3AQ96ST3 1273 aa24.42■■□□□ 1.5
CGREF1-201ENST00000260595 PLCH1Q4KWH8 1693 aa24.41■■□□□ 1.5
CGREF1-201ENST00000260595 CCDC61Q9Y6R9 512 aa24.41■■□□□ 1.5
CGREF1-201ENST00000260595 NWD2Q9ULI1 1742 aa24.41■■□□□ 1.5
CGREF1-201ENST00000260595 ONECUT3O60422 494 aaPredicted RBP24.4■■□□□ 1.5
CGREF1-201ENST00000260595 PAK3O75914 559 aaPredicted RBP24.4■■□□□ 1.5
CGREF1-201ENST00000260595 POLR3AO14802 1390 aaPredicted RBP24.4■■□□□ 1.5
CGREF1-201ENST00000260595 PLEKHG3A1L390 1219 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms