RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 CPLX1O14810 134 aa4.92□□□□□ -1.62
RNF38-201ENST00000259605 EIF2S2P20042 333 aaKnown RBP4.92□□□□□ -1.62
RNF38-201ENST00000259605 ST5P78524 1137 aa4.92□□□□□ -1.62
RNF38-201ENST00000259605 SMARCC1Q92922 1105 aaPredicted RBP4.92□□□□□ -1.62
RNF38-201ENST00000259605 ZNF692Q9BU19 519 aaPredicted RBP4.92□□□□□ -1.62
RNF38-201ENST00000259605 DPY19L2Q6NUT2 758 aa4.92□□□□□ -1.62
RNF38-201ENST00000259605 TIMELESSQ9UNS1 1208 aa4.92□□□□□ -1.62
RNF38-201ENST00000259605 ARHGAP35Q9NRY4 1499 aa4.92□□□□□ -1.62
RNF38-201ENST00000259605 KIF16BQ96L93 1317 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 IPO7O95373 1038 aaKnown RBP4.91□□□□□ -1.62
RNF38-201ENST00000259605 ZNF772Q68DY9 489 aaPredicted RBP4.91□□□□□ -1.62
RNF38-201ENST00000259605 LRSAM1Q6UWE0 723 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 HOOK2Q96ED9 719 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 BRDTQ58F21 947 aaPredicted RBP4.91□□□□□ -1.62
RNF38-201ENST00000259605 PRKAG2Q9UGJ0 569 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 IFIT2P09913 472 aaKnown RBP4.91□□□□□ -1.62
RNF38-201ENST00000259605 IGHMBP2P38935 993 aaKnown RBP4.91□□□□□ -1.62
RNF38-201ENST00000259605 TCIRG1Q13488 830 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 DNTTIP2Q5QJE6 756 aaKnown RBP4.91□□□□□ -1.62
RNF38-201ENST00000259605 OTUD7BQ6GQQ9 843 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 NFXL1Q6ZNB6 911 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 OGFOD1Q8N543 542 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 EHMT1Q9H9B1 1298 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 FANCD2Q9BXW9 1451 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 CCDC144AA2RUR9 1427 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 APBB1O00213 710 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 TRAF1Q13077 416 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 RALYLQ86SE5 291 aaKnown RBP4.91□□□□□ -1.62
RNF38-201ENST00000259605 ERC1Q8IUD2 1116 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 CNNM1Q9NRU3 951 aa4.91□□□□□ -1.62
RNF38-201ENST00000259605 FAM177BA6PVY3 158 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 CA8P35219 290 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 ATP2B2Q01814 1243 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 HSP90AB3PQ58FF7 597 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 RNF20Q5VTR2 975 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 CRACR2BQ8N4Y2 399 aaPredicted RBP4.9□□□□□ -1.62
RNF38-201ENST00000259605 RWDD1Q9H446 243 aaPredicted RBP4.9□□□□□ -1.62
RNF38-201ENST00000259605 PARP3Q9Y6F1 533 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 AKNAQ7Z591 1439 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 RFC4P35249 363 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 RALBP1Q15311 655 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 TPRNQ4KMQ1 711 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 HSCBQ8IWL3 235 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 FAM184AQ8NB25 1140 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 NACAP1Q9BZK3 213 aa4.9□□□□□ -1.62
RNF38-201ENST00000259605 PES1O00541 588 aaKnown RBP4.9□□□□□ -1.63
RNF38-201ENST00000259605 PTMSP20962 102 aa4.9□□□□□ -1.63
RNF38-201ENST00000259605 PDE6BP35913 854 aa4.9□□□□□ -1.63
RNF38-201ENST00000259605 TMOD3Q9NYL9 352 aa4.9□□□□□ -1.63
RNF38-201ENST00000259605 KIF15Q9NS87 1388 aa4.9□□□□□ -1.63
RNF38-201ENST00000259605 DRC7Q8IY82 874 aa4.9□□□□□ -1.63
RNF38-201ENST00000259605 SPRYD3Q8NCJ5 442 aa4.9□□□□□ -1.63
RNF38-201ENST00000259605 ZNF622Q969S3 477 aaKnown RBP eCLIP4.9□□□□□ -1.63
RNF38-201ENST00000259605 SYAP1Q96A49 352 aaPredicted RBP4.9□□□□□ -1.63
RNF38-201ENST00000259605 FERMT2Q96AC1 680 aa4.9□□□□□ -1.63
RNF38-201ENST00000259605 DNAJC2Q99543 621 aaKnown RBP4.9□□□□□ -1.63
RNF38-201ENST00000259605 TEX13AQ9BXU3 409 aaPredicted RBP4.9□□□□□ -1.63
RNF38-201ENST00000259605 ERICH6BQ5W0A0 696 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 LRRC59Q96AG4 307 aaKnown RBP4.89□□□□□ -1.63
RNF38-201ENST00000259605 C8orf37Q96NL8 207 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNF38-201ENST00000259605 NOC2LQ9Y3T9 749 aaKnown RBP4.89□□□□□ -1.63
RNF38-201ENST00000259605 KIF4AO95239 1232 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 WASHC4Q2M389 1173 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 PPP4R3BQ5MIZ7 849 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 ITPRIPQ8IWB1 547 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 DIAPH3Q9NSV4 1193 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 CC2D2AQ9P2K1 1620 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 FYB1O15117 783 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 ZKSCAN1P17029 563 aaPredicted RBP4.89□□□□□ -1.63
RNF38-201ENST00000259605 ZSCAN25Q6NSZ9 544 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 CREBRFQ8IUR6 639 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 TEX14Q8IWB6 1497 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 SOGA3Q5TF21 947 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 PLEKHH2Q8IVE3 1493 aa4.89□□□□□ -1.63
RNF38-201ENST00000259605 H3BQV1 296 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 ERC2O15083 957 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 DIAPH1O60610 1272 aaKnown RBP4.88□□□□□ -1.63
RNF38-201ENST00000259605 SYCP1Q15431 976 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 IFFO2Q5TF58 517 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 CCDC70Q6NSX1 233 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 CDK5RAP3Q96JB5 506 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 FEZ1Q99689 392 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 IBSPP21815 317 aaPredicted RBP4.88□□□□□ -1.63
RNF38-201ENST00000259605 EPS15P42566 896 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 ZFYVE27Q5T4F4 411 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 CDCA7Q9BWT1 371 aaPredicted RBP4.88□□□□□ -1.63
RNF38-201ENST00000259605 CABP5Q9NP86 173 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 DISP3Q9P2K9 1392 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 EIF6P56537 245 aaKnown RBP4.88□□□□□ -1.63
RNF38-201ENST00000259605 CCDC158Q5M9N0 1113 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 RRP7AQ9Y3A4 280 aaKnown RBP4.88□□□□□ -1.63
RNF38-201ENST00000259605 PLIN1O60240 522 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 LDHCP07864 332 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 TNNI2P48788 182 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 CCDC117Q8IWD4 279 aaPredicted RBP4.88□□□□□ -1.63
RNF38-201ENST00000259605 DHX37Q8IY37 1157 aaKnown RBP4.88□□□□□ -1.63
RNF38-201ENST00000259605 FLAD1Q8NFF5 587 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 TFCP2L1Q9NZI6 479 aa4.88□□□□□ -1.63
RNF38-201ENST00000259605 SYNJ2O15056 1496 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms