RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 MSH6P52701 1360 aa21.82■■□□□ 1.08
GYPC-201ENST00000259254 MED1Q15648 1581 aaPredicted RBP21.82■■□□□ 1.08
GYPC-201ENST00000259254 SAFB2Q14151 953 aaKnown RBP eCLIP21.81■■□□□ 1.081e-7■■■□□ 18.5
GYPC-201ENST00000259254 FAM135BQ49AJ0 1406 aa21.8■■□□□ 1.08
GYPC-201ENST00000259254 PTPRUQ92729 1446 aa21.8■■□□□ 1.08
GYPC-201ENST00000259254 NCOA3Q9Y6Q9 1424 aa21.8■■□□□ 1.08
GYPC-201ENST00000259254 DLC1Q96QB1 1528 aa21.78■■□□□ 1.08
GYPC-201ENST00000259254 TECPR2O15040 1411 aa21.78■■□□□ 1.08
GYPC-201ENST00000259254 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.77■■□□□ 1.08
GYPC-201ENST00000259254 WAPLQ7Z5K2 1190 aa21.77■■□□□ 1.08
GYPC-201ENST00000259254 ROBO2Q9HCK4 1378 aa21.76■■□□□ 1.07
GYPC-201ENST00000259254 TESK2Q96S53 571 aa21.76■■□□□ 1.07
GYPC-201ENST00000259254 TMF1P82094 1093 aa21.75■■□□□ 1.07
GYPC-201ENST00000259254 SIRT1Q96EB6 747 aa21.75■■□□□ 1.07
GYPC-201ENST00000259254 POLR3GLQ9BT43 218 aa21.75■■□□□ 1.07
GYPC-201ENST00000259254 PLEKHH1Q9ULM0 1364 aa21.74■■□□□ 1.07
GYPC-201ENST00000259254 SLC24A1O60721 1099 aa21.74■■□□□ 1.07
GYPC-201ENST00000259254 MINK1Q8N4C8 1332 aaPredicted RBP21.74■■□□□ 1.07
GYPC-201ENST00000259254 PTCH1Q13635 1447 aa21.73■■□□□ 1.07
GYPC-201ENST00000259254 ARHGEF28Q8N1W1 1705 aaKnown RBP21.73■■□□□ 1.07
GYPC-201ENST00000259254 ILDR2Q71H61 639 aa21.73■■□□□ 1.07
GYPC-201ENST00000259254 KNDC1Q76NI1 1749 aa21.72■■□□□ 1.07
GYPC-201ENST00000259254 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
GYPC-201ENST00000259254 C11orf95C9JLR9 678 aaPredicted RBP21.7■■□□□ 1.06
GYPC-201ENST00000259254 C14orf37Q86TY3 774 aa21.7■■□□□ 1.06
GYPC-201ENST00000259254 SLAIN2Q9P270 581 aa21.7■■□□□ 1.06
GYPC-201ENST00000259254 PHLPP1O60346 1717 aa21.69■■□□□ 1.06
GYPC-201ENST00000259254 KIF7Q2M1P5 1343 aa21.69■■□□□ 1.06
GYPC-201ENST00000259254 QRICH2Q9H0J4 1663 aa21.69■■□□□ 1.06
GYPC-201ENST00000259254 CDCA8Q53HL2 280 aa21.68■■□□□ 1.06
GYPC-201ENST00000259254 C19orf44Q9H6X5 657 aa21.68■■□□□ 1.06
GYPC-201ENST00000259254 WASHC2AQ641Q2 1341 aa21.68■■□□□ 1.06
GYPC-201ENST00000259254 EVC2Q86UK5 1308 aa21.68■■□□□ 1.06
GYPC-201ENST00000259254 CCDC7Q96M83 1385 aa21.68■■□□□ 1.06
GYPC-201ENST00000259254 NALCNQ8IZF0 1738 aa21.66■■□□□ 1.06
GYPC-201ENST00000259254 DCCP43146 1447 aa21.66■■□□□ 1.06
GYPC-201ENST00000259254 CADPS2Q86UW7 1296 aa21.66■■□□□ 1.06
GYPC-201ENST00000259254 ATF3P18847 181 aa21.64■■□□□ 1.05
GYPC-201ENST00000259254 SRPK2P78362 688 aaKnown RBP21.64■■□□□ 1.05
GYPC-201ENST00000259254 COL16A1Q07092 1604 aaPredicted RBP21.63■■□□□ 1.05
GYPC-201ENST00000259254 ADGRL3Q9HAR2 1447 aa21.62■■□□□ 1.05
GYPC-201ENST00000259254 AHDC1Q5TGY3 1603 aaPredicted RBP21.62■■□□□ 1.05
GYPC-201ENST00000259254 TULP4Q9NRJ4 1543 aa21.61■■□□□ 1.05
GYPC-201ENST00000259254 CDK19Q9BWU1 502 aa21.61■■□□□ 1.05
GYPC-201ENST00000259254 WASLO00401 505 aaPredicted RBP21.6■■□□□ 1.05
GYPC-201ENST00000259254 DDX10Q13206 875 aaKnown RBP21.6■■□□□ 1.05
GYPC-201ENST00000259254 CABP2Q9NPB3 220 aa21.6■■□□□ 1.05
GYPC-201ENST00000259254 MST1RQ04912 1400 aa21.58■■□□□ 1.05
GYPC-201ENST00000259254 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
GYPC-201ENST00000259254 SOCS7O14512 581 aa21.56■■□□□ 1.04
GYPC-201ENST00000259254 NHSL1Q5SYE7 1610 aa21.55■■□□□ 1.04
GYPC-201ENST00000259254 TMC1Q8TDI8 760 aa21.55■■□□□ 1.04
GYPC-201ENST00000259254 PUS7Q96PZ0 661 aaKnown RBP21.55■■□□□ 1.04
GYPC-201ENST00000259254 ADGRB2O60241 1585 aa21.54■■□□□ 1.04
GYPC-201ENST00000259254 ATAD2Q6PL18 1390 aa21.54■■□□□ 1.04
GYPC-201ENST00000259254 JCADQ9P266 1359 aa21.54■■□□□ 1.04
GYPC-201ENST00000259254 SHPRHQ149N8 1683 aa21.53■■□□□ 1.04
GYPC-201ENST00000259254 NUTM2FA1L443 756 aa21.53■■□□□ 1.04
GYPC-201ENST00000259254 BRINP3Q76B58 766 aa21.53■■□□□ 1.04
GYPC-201ENST00000259254 NUDT16Q96DE0 195 aaKnown RBP21.51■■□□□ 1.03
GYPC-201ENST00000259254 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
GYPC-201ENST00000259254 CDC42BPGQ6DT37 1551 aa21.48■■□□□ 1.03
GYPC-201ENST00000259254 SLC12A5Q9H2X9 1139 aa21.47■■□□□ 1.03
GYPC-201ENST00000259254 PRR36Q9H6K5 1346 aa21.47■■□□□ 1.03
GYPC-201ENST00000259254 C1orf167Q5SNV9 1468 aa21.46■■□□□ 1.03
GYPC-201ENST00000259254 PANK3Q9H999 370 aa21.46■■□□□ 1.03
GYPC-201ENST00000259254 CCDC61Q9Y6R9 512 aa21.46■■□□□ 1.03
GYPC-201ENST00000259254 NINLQ9Y2I6 1382 aa21.46■■□□□ 1.03
GYPC-201ENST00000259254 CABP1Q9NZU7 370 aa21.45■■□□□ 1.02
GYPC-201ENST00000259254 RGS17Q9UGC6 210 aaPredicted RBP21.45■■□□□ 1.02
GYPC-201ENST00000259254 PPIP5K1Q6PFW1 1433 aa21.45■■□□□ 1.02
GYPC-201ENST00000259254 ANKARQ7Z5J8 1434 aa21.45■■□□□ 1.02
GYPC-201ENST00000259254 ATP7BP35670 1465 aa21.45■■□□□ 1.02
GYPC-201ENST00000259254 SPATA31A6Q5VVP1 1343 aa21.43■■□□□ 1.02
GYPC-201ENST00000259254 LRP6O75581 1613 aa21.43■■□□□ 1.02
GYPC-201ENST00000259254 HDGFL2Q7Z4V5 671 aaPredicted RBP21.42■■□□□ 1.02
GYPC-201ENST00000259254 TERF2IPQ9NYB0 399 aa21.42■■□□□ 1.02
GYPC-201ENST00000259254 FMN2Q9NZ56 1722 aa21.4■■□□□ 1.02
GYPC-201ENST00000259254 ANKRD36BQ8N2N9 1353 aa21.39■■□□□ 1.02
GYPC-201ENST00000259254 MYOM1P52179 1685 aa21.39■■□□□ 1.01
GYPC-201ENST00000259254 ESCO1Q5FWF5 840 aa21.38■■□□□ 1.01
GYPC-201ENST00000259254 PMFBP1Q8TBY8 1022 aa21.38■■□□□ 1.01
GYPC-201ENST00000259254 CNGB1Q14028 1251 aaPredicted RBP21.37■■□□□ 1.01
GYPC-201ENST00000259254 NGDNQ8NEJ9 315 aaKnown RBP21.37■■□□□ 1.01
GYPC-201ENST00000259254 DDX17Q92841 729 aaKnown RBP21.37■■□□□ 1.01
GYPC-201ENST00000259254 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
GYPC-201ENST00000259254 A0A1W2PP64 1363 aa21.36■■□□□ 1.01
GYPC-201ENST00000259254 PLEKHG3A1L390 1219 aa21.36■■□□□ 1.01
GYPC-201ENST00000259254 ORAI2Q96SN7 254 aa21.36■■□□□ 1.01
GYPC-201ENST00000259254 PHF8Q9UPP1 1060 aa21.36■■□□□ 1.01
GYPC-201ENST00000259254 USP32Q8NFA0 1604 aa21.36■■□□□ 1.01
GYPC-201ENST00000259254 LRRC59Q96AG4 307 aaKnown RBP21.35■■□□□ 1.01
GYPC-201ENST00000259254 ACEP12821 1306 aa21.34■■□□□ 1.01
GYPC-201ENST00000259254 CARD14Q9BXL6 1004 aa21.34■■□□□ 1.01
GYPC-201ENST00000259254 NSD3Q9BZ95 1437 aa21.34■■□□□ 1.01
GYPC-201ENST00000259254 POTEAQ6S8J7 498 aa21.33■■□□□ 1.01
GYPC-201ENST00000259254 KTN1Q86UP2 1357 aaKnown RBP21.33■■□□□ 1
GYPC-201ENST00000259254 PNPLA6Q8IY17 1366 aa21.33■■□□□ 1
GYPC-201ENST00000259254 CD163L1Q9NR16 1453 aa21.32■■□□□ 1
GYPC-201ENST00000259254 TOPAZ1Q8N9V7 1692 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms