RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 MSS51Q4VC12 460 aa12.06□□□□□ -0.48
TRA2B-201ENST00000259043 TREML4Q6UXN2 200 aa12.06□□□□□ -0.48
TRA2B-201ENST00000259043 BCANQ96GW7 911 aa12.06□□□□□ -0.48
TRA2B-201ENST00000259043 ZBTB24O43167 697 aaPredicted RBP12.05□□□□□ -0.48
TRA2B-201ENST00000259043 GRIPAP1Q4V328 841 aa12.05□□□□□ -0.48
TRA2B-201ENST00000259043 PRDM9Q9NQV7 894 aa12.05□□□□□ -0.48
TRA2B-201ENST00000259043 MINK1Q8N4C8 1332 aaPredicted RBP12.05□□□□□ -0.48
TRA2B-201ENST00000259043 AXIN1O15169 862 aa12.04□□□□□ -0.48
TRA2B-201ENST00000259043 CTC1Q2NKJ3 1217 aa12.04□□□□□ -0.48
TRA2B-201ENST00000259043 BARGINQ6ZT62 677 aa12.04□□□□□ -0.48
TRA2B-201ENST00000259043 DACH1Q9UI36 760 aa12.03□□□□□ -0.48
TRA2B-201ENST00000259043 LCE2AQ5TA79 106 aaPredicted RBP12.02□□□□□ -0.49
TRA2B-201ENST00000259043 SMCPP49901 116 aaPredicted RBP12.01□□□□□ -0.49
TRA2B-201ENST00000259043 RNF19BQ6ZMZ0 732 aa12.01□□□□□ -0.49
TRA2B-201ENST00000259043 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
TRA2B-201ENST00000259043 TTC24A2A3L6 582 aaPredicted RBP11.99□□□□□ -0.49
TRA2B-201ENST00000259043 Q3C1V9 767 aa11.99□□□□□ -0.49
TRA2B-201ENST00000259043 GMPR2Q9P2T1 348 aaKnown RBP11.99□□□□□ -0.49
TRA2B-201ENST00000259043 C11orf95C9JLR9 678 aaPredicted RBP11.97□□□□□ -0.49
TRA2B-201ENST00000259043 WNT7AO00755 349 aa11.97□□□□□ -0.49
TRA2B-201ENST00000259043 MMP16P51512 607 aa11.96□□□□□ -0.49
TRA2B-201ENST00000259043 TRIM32Q13049 653 aa11.95□□□□□ -0.5
TRA2B-201ENST00000259043 SNIP1Q8TAD8 396 aaKnown RBP11.95□□□□□ -0.5
TRA2B-201ENST00000259043 CD46P15529 392 aa11.94□□□□□ -0.5
TRA2B-201ENST00000259043 WFS1O76024 890 aa11.93□□□□□ -0.5
TRA2B-201ENST00000259043 SMPD1P17405 629 aa11.92□□□□□ -0.5
TRA2B-201ENST00000259043 KDM4AO75164 1064 aa11.91□□□□□ -0.5
TRA2B-201ENST00000259043 KRI1Q8N9T8 703 aaKnown RBP11.91□□□□□ -0.5
TRA2B-201ENST00000259043 USB1Q9BQ65 265 aaKnown RBP11.91□□□□□ -0.5
TRA2B-201ENST00000259043 MRGPRX2Q96LB1 330 aa11.9□□□□□ -0.5
TRA2B-201ENST00000259043 DXOO77932 396 aaKnown RBP11.89□□□□□ -0.51
TRA2B-201ENST00000259043 MDM2Q00987 491 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-201ENST00000259043 USP46P62068 366 aa11.88□□□□□ -0.51
TRA2B-201ENST00000259043 REPIN1Q9BWE0 567 aaKnown RBP11.88□□□□□ -0.51
TRA2B-201ENST00000259043 ATP13A2Q9NQ11 1180 aa11.88□□□□□ -0.51
TRA2B-201ENST00000259043 J3QL48 77 aa11.86□□□□□ -0.51
TRA2B-201ENST00000259043 NFX1Q12986 1120 aaKnown RBP11.86□□□□□ -0.51
TRA2B-201ENST00000259043 AMHR2Q16671 573 aa11.86□□□□□ -0.51
TRA2B-201ENST00000259043 SENP2Q9HC62 589 aa11.84□□□□□ -0.51
TRA2B-201ENST00000259043 GPCPD1Q9NPB8 672 aa11.84□□□□□ -0.51
TRA2B-201ENST00000259043 TRIM66O15016 1216 aa11.83□□□□□ -0.52
TRA2B-201ENST00000259043 CLCN1P35523 988 aa11.83□□□□□ -0.52
TRA2B-201ENST00000259043 CCDC24Q8N4L8 307 aa11.83□□□□□ -0.52
TRA2B-201ENST00000259043 WNT7BP56706 349 aa11.82□□□□□ -0.52
TRA2B-201ENST00000259043 TRIM47Q96LD4 638 aa11.82□□□□□ -0.52
TRA2B-201ENST00000259043 AK7Q96M32 723 aa11.82□□□□□ -0.52
TRA2B-201ENST00000259043 SLC24A3Q9HC58 644 aa11.82□□□□□ -0.52
TRA2B-201ENST00000259043 FAM217BQ9NTX9 383 aaPredicted RBP11.82□□□□□ -0.52
TRA2B-201ENST00000259043 HOXA2O43364 376 aa11.81□□□□□ -0.52
TRA2B-201ENST00000259043 WIPF1O43516 503 aa11.81□□□□□ -0.52
TRA2B-201ENST00000259043 RC3H1Q5TC82 1133 aaKnown RBP11.81□□□□□ -0.52
TRA2B-201ENST00000259043 HPS1Q92902 700 aa11.81□□□□□ -0.52
TRA2B-201ENST00000259043 HLA-CQ95604 372 aa11.81□□□□□ -0.52
TRA2B-201ENST00000259043 SNRPBP14678 240 aaKnown RBP11.8□□□□□ -0.52
TRA2B-201ENST00000259043 SKOR1P84550 965 aa11.79□□□□□ -0.52
TRA2B-201ENST00000259043 STK17AQ9UEE5 414 aa11.79□□□□□ -0.52
TRA2B-201ENST00000259043 INSM1Q01101 510 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-201ENST00000259043 KIFC2Q96AC6 838 aa11.78□□□□□ -0.52
TRA2B-201ENST00000259043 TERTO14746 1132 aaKnown RBP11.77□□□□□ -0.53
TRA2B-201ENST00000259043 JUNDP17535 347 aa11.77□□□□□ -0.53
TRA2B-201ENST00000259043 PARP9Q8IXQ6 854 aa11.76□□□□□ -0.53
TRA2B-201ENST00000259043 GIGYF2Q6Y7W6 1299 aaKnown RBP11.75□□□□□ -0.53
TRA2B-201ENST00000259043 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-201ENST00000259043 GUCA2AQ02747 115 aa11.74□□□□□ -0.53
TRA2B-201ENST00000259043 TTLL12Q14166 644 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-201ENST00000259043 ALDH1A1P00352 501 aa11.73□□□□□ -0.53
TRA2B-201ENST00000259043 PDE4DQ08499 809 aa11.72□□□□□ -0.53
TRA2B-201ENST00000259043 RETREG3Q86VR2 466 aa11.72□□□□□ -0.53
TRA2B-201ENST00000259043 SYMPKQ92797 1274 aaKnown RBP11.72□□□□□ -0.53
TRA2B-201ENST00000259043 LCE2CQ5TA81 110 aa11.71□□□□□ -0.53
TRA2B-201ENST00000259043 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
TRA2B-201ENST00000259043 NUDT12Q9BQG2 462 aa11.71□□□□□ -0.53
TRA2B-201ENST00000259043 MS4A1P11836 297 aa11.69□□□□□ -0.54
TRA2B-201ENST00000259043 SIAH2O43255 324 aa11.68□□□□□ -0.54
TRA2B-201ENST00000259043 PTCRAQ6ISU1 281 aaPredicted RBP11.68□□□□□ -0.54
TRA2B-201ENST00000259043 EHBP1Q8NDI1 1231 aa11.68□□□□□ -0.54
TRA2B-201ENST00000259043 SLC16A10Q8TF71 515 aa11.65□□□□□ -0.54
TRA2B-201ENST00000259043 WASF2Q9Y6W5 498 aa11.65□□□□□ -0.54
TRA2B-201ENST00000259043 FDX1P10109 184 aa11.64□□□□□ -0.55
TRA2B-201ENST00000259043 C6orf229H3BNL8 230 aa11.63□□□□□ -0.55
TRA2B-201ENST00000259043 SPIRE2Q8WWL2 714 aa11.63□□□□□ -0.55
TRA2B-201ENST00000259043 BEGAINQ9BUH8 593 aa11.63□□□□□ -0.55
TRA2B-201ENST00000259043 NXF1Q9UBU9 619 aaKnown RBP11.63□□□□□ -0.55
TRA2B-201ENST00000259043 PCDHGC3Q9UN70 934 aa11.63□□□□□ -0.55
TRA2B-201ENST00000259043 CAPN5O15484 640 aaPredicted RBP11.62□□□□□ -0.55
TRA2B-201ENST00000259043 CCNYL3P0C7X3 344 aa11.62□□□□□ -0.55
TRA2B-201ENST00000259043 SH3BP2P78314 561 aa11.62□□□□□ -0.55
TRA2B-201ENST00000259043 TRIM46Q7Z4K8 759 aa11.61□□□□□ -0.55
TRA2B-201ENST00000259043 BMP1P13497 986 aa11.6□□□□□ -0.55
TRA2B-201ENST00000259043 PTPRNQ16849 979 aa11.6□□□□□ -0.55
TRA2B-201ENST00000259043 NPAS3Q8IXF0 933 aa11.59□□□□□ -0.55
TRA2B-201ENST00000259043 EVA1BQ9NVM1 165 aa11.59□□□□□ -0.55
TRA2B-201ENST00000259043 UNC93B1Q9H1C4 597 aa11.58□□□□□ -0.56
TRA2B-201ENST00000259043 MOXD2PA6NHM9 499 aa11.56□□□□□ -0.56
TRA2B-201ENST00000259043 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
TRA2B-201ENST00000259043 TBC1D2Q9BYX2 928 aa11.56□□□□□ -0.56
TRA2B-201ENST00000259043 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
TRA2B-201ENST00000259043 FAM181BA6NEQ2 426 aa11.55□□□□□ -0.56
TRA2B-201ENST00000259043 NDUFV2P19404 249 aa11.55□□□□□ -0.56
TRA2B-201ENST00000259043 KCNH2Q12809 1159 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms