RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 POGKQ9P215 609 aa17.34■□□□□ 0.37
THSD1-201ENST00000258613 ARHGAP31Q2M1Z3 1444 aa17.34■□□□□ 0.37
THSD1-201ENST00000258613 SBNO2Q9Y2G9 1366 aa17.34■□□□□ 0.37
THSD1-201ENST00000258613 PREX1Q8TCU6 1659 aa17.34■□□□□ 0.37
THSD1-201ENST00000258613 EVC2Q86UK5 1308 aa17.33■□□□□ 0.37
THSD1-201ENST00000258613 MTHFSP49914 203 aa17.33■□□□□ 0.37
THSD1-201ENST00000258613 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.37
THSD1-201ENST00000258613 MYO3AQ8NEV4 1616 aa17.32■□□□□ 0.36
THSD1-201ENST00000258613 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
THSD1-201ENST00000258613 ZMYM4Q5VZL5 1548 aa17.32■□□□□ 0.36
THSD1-201ENST00000258613 TULP4Q9NRJ4 1543 aa17.32■□□□□ 0.36
THSD1-201ENST00000258613 FBLN1P23142 703 aa17.32■□□□□ 0.36
THSD1-201ENST00000258613 NPC1L1Q9UHC9 1359 aa17.31■□□□□ 0.36
THSD1-201ENST00000258613 CRBNQ96SW2 442 aa17.31■□□□□ 0.36
THSD1-201ENST00000258613 TMEM131LA2VDJ0 1609 aa17.31■□□□□ 0.36
THSD1-201ENST00000258613 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
THSD1-201ENST00000258613 GOLGA2Q08379 1002 aa17.31■□□□□ 0.36
THSD1-201ENST00000258613 ARHGEF28Q8N1W1 1705 aaKnown RBP17.3■□□□□ 0.36
THSD1-201ENST00000258613 ZC3H13Q5T200 1668 aaKnown RBP17.3■□□□□ 0.36
THSD1-201ENST00000258613 MSH5O43196 834 aa17.3■□□□□ 0.36
THSD1-201ENST00000258613 ZNF521Q96K83 1311 aa17.29■□□□□ 0.36
THSD1-201ENST00000258613 CLTCQ00610 1675 aaKnown RBP17.29■□□□□ 0.36
THSD1-201ENST00000258613 CGNL1Q0VF96 1302 aa17.27■□□□□ 0.36
THSD1-201ENST00000258613 SLFN5Q08AF3 891 aa17.26■□□□□ 0.35
THSD1-201ENST00000258613 A0A1W2PP64 1363 aa17.26■□□□□ 0.35
THSD1-201ENST00000258613 CDK19Q9BWU1 502 aa17.26■□□□□ 0.35
THSD1-201ENST00000258613 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
THSD1-201ENST00000258613 BCAR3O75815 825 aa17.25■□□□□ 0.35
THSD1-201ENST00000258613 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
THSD1-201ENST00000258613 CABP1Q9NZU7 370 aa17.25■□□□□ 0.35
THSD1-201ENST00000258613 NCKAP5LQ9HCH0 1330 aa17.25■□□□□ 0.35
THSD1-201ENST00000258613 CEBPAP49715 358 aaPredicted RBP17.25■□□□□ 0.35
THSD1-201ENST00000258613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.24■□□□□ 0.35
THSD1-201ENST00000258613 PTPRMP28827 1452 aa17.23■□□□□ 0.35
THSD1-201ENST00000258613 TXNDC2Q86VQ3 553 aa17.23■□□□□ 0.35
THSD1-201ENST00000258613 KIF13AQ9H1H9 1805 aa17.23■□□□□ 0.35
THSD1-201ENST00000258613 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
THSD1-201ENST00000258613 ANKRD36BQ8N2N9 1353 aa17.22■□□□□ 0.35
THSD1-201ENST00000258613 U2AF1L5P0DN76 240 aaPredicted RBP17.22■□□□□ 0.35
THSD1-201ENST00000258613 U2AF1Q01081 240 aaKnown RBP eCLIP17.22■□□□□ 0.35
THSD1-201ENST00000258613 ALKQ9UM73 1620 aa17.21■□□□□ 0.35
THSD1-201ENST00000258613 INSRP06213 1382 aa17.21■□□□□ 0.35
THSD1-201ENST00000258613 ZMYM3Q14202 1370 aa17.21■□□□□ 0.35
THSD1-201ENST00000258613 WWC1Q8IX03 1113 aa17.21■□□□□ 0.35
THSD1-201ENST00000258613 ZFYVE9O95405 1425 aa17.21■□□□□ 0.35
THSD1-201ENST00000258613 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
THSD1-201ENST00000258613 FYB1O15117 783 aa17.21■□□□□ 0.35
THSD1-201ENST00000258613 A2ML1A8K2U0 1454 aa17.2■□□□□ 0.34
THSD1-201ENST00000258613 U2SURPO15042 1029 aaKnown RBP17.2■□□□□ 0.34
THSD1-201ENST00000258613 PPM1GO15355 546 aaPredicted RBP17.2■□□□□ 0.34
THSD1-201ENST00000258613 ANO8Q9HCE9 1232 aaPredicted RBP17.2■□□□□ 0.34
THSD1-201ENST00000258613 NUTM2FA1L443 756 aa17.19■□□□□ 0.34
THSD1-201ENST00000258613 RIMS2Q9UQ26 1411 aa17.19■□□□□ 0.34
THSD1-201ENST00000258613 METP08581 1390 aa17.18■□□□□ 0.34
THSD1-201ENST00000258613 BCL2L13Q9BXK5 485 aa17.18■□□□□ 0.34
THSD1-201ENST00000258613 TRMT2AQ8IZ69 625 aaKnown RBP17.17■□□□□ 0.34
THSD1-201ENST00000258613 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
THSD1-201ENST00000258613 SHPRHQ149N8 1683 aa17.16■□□□□ 0.34
THSD1-201ENST00000258613 RUNDC1Q96C34 613 aa17.16■□□□□ 0.34
THSD1-201ENST00000258613 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
THSD1-201ENST00000258613 TERF2IPQ9NYB0 399 aa17.15■□□□□ 0.34
THSD1-201ENST00000258613 CD163L1Q9NR16 1453 aa17.14■□□□□ 0.34
THSD1-201ENST00000258613 TNNQ9UQP3 1299 aa17.14■□□□□ 0.33
THSD1-201ENST00000258613 AGLP35573 1532 aa17.14■□□□□ 0.33
THSD1-201ENST00000258613 E9PSI1 815 aa17.13■□□□□ 0.33
THSD1-201ENST00000258613 FRAT1Q92837 279 aaPredicted RBP17.13■□□□□ 0.33
THSD1-201ENST00000258613 ABCC11Q96J66 1382 aa17.12■□□□□ 0.33
THSD1-201ENST00000258613 SLC26A8Q96RN1 970 aa17.12■□□□□ 0.33
THSD1-201ENST00000258613 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
THSD1-201ENST00000258613 PANK1Q8TE04 598 aa17.11■□□□□ 0.33
THSD1-201ENST00000258613 HDGFL2Q7Z4V5 671 aaPredicted RBP17.11■□□□□ 0.33
THSD1-201ENST00000258613 NPM2Q86SE8 214 aaKnown RBP17.11■□□□□ 0.33
THSD1-201ENST00000258613 PUS7Q96PZ0 661 aaKnown RBP17.11■□□□□ 0.33
THSD1-201ENST00000258613 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
THSD1-201ENST00000258613 SPATA31D1Q6ZQQ2 1576 aa17.11■□□□□ 0.33
THSD1-201ENST00000258613 TSR2Q969E8 191 aaKnown RBP17.1■□□□□ 0.33
THSD1-201ENST00000258613 ATAD2Q6PL18 1390 aa17.1■□□□□ 0.33
THSD1-201ENST00000258613 ARHGEF40Q8TER5 1519 aa17.1■□□□□ 0.33
THSD1-201ENST00000258613 LTKP29376 864 aa17.1■□□□□ 0.33
THSD1-201ENST00000258613 FANCIQ9NVI1 1328 aa17.1■□□□□ 0.33
THSD1-201ENST00000258613 NME9Q86XW9 330 aa17.1■□□□□ 0.33
THSD1-201ENST00000258613 COG6Q9Y2V7 657 aa17.08■□□□□ 0.32
THSD1-201ENST00000258613 REREQ9P2R6 1566 aa17.08■□□□□ 0.32
THSD1-201ENST00000258613 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
THSD1-201ENST00000258613 CLUAP1Q96AJ1 413 aa17.07■□□□□ 0.32
THSD1-201ENST00000258613 TNRQ92752 1358 aa17.07■□□□□ 0.32
THSD1-201ENST00000258613 EMILIN1Q9Y6C2 1016 aa17.07■□□□□ 0.32
THSD1-201ENST00000258613 WASLO00401 505 aaPredicted RBP17.07■□□□□ 0.32
THSD1-201ENST00000258613 CANXP27824 592 aaKnown RBP17.07■□□□□ 0.32
THSD1-201ENST00000258613 HMOX1P09601 288 aa17.06■□□□□ 0.32
THSD1-201ENST00000258613 NLRP1Q9C000 1473 aa17.06■□□□□ 0.32
THSD1-201ENST00000258613 NUDT16Q96DE0 195 aaKnown RBP17.05■□□□□ 0.32
THSD1-201ENST00000258613 USP32Q8NFA0 1604 aa17.05■□□□□ 0.32
THSD1-201ENST00000258613 NRXN3Q9Y4C0 1643 aa17.05■□□□□ 0.32
THSD1-201ENST00000258613 PAK3O75914 559 aaPredicted RBP17.04■□□□□ 0.32
THSD1-201ENST00000258613 RRS1Q15050 365 aaKnown RBP17.04■□□□□ 0.32
THSD1-201ENST00000258613 SOX12O15370 315 aa17.04■□□□□ 0.32
THSD1-201ENST00000258613 POLKQ9UBT6 870 aa17.04■□□□□ 0.32
THSD1-201ENST00000258613 NSD2O96028 1365 aa17.04■□□□□ 0.32
THSD1-201ENST00000258613 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms