RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 SPATA31E1Q6ZUB1 1445 aa27.8■■■□□ 2.04
PAX3-201ENST00000258387 PRAG1Q86YV5 1406 aa27.79■■■□□ 2.04
PAX3-201ENST00000258387 ANKRD30BQ9BXX2 1392 aa27.79■■■□□ 2.04
PAX3-201ENST00000258387 NUTM2FA1L443 756 aa27.79■■■□□ 2.04
PAX3-201ENST00000258387 UPF1Q92900 1129 aaKnown RBP eCLIP27.79■■■□□ 2.04
PAX3-201ENST00000258387 LRPPRCP42704 1394 aaKnown RBP27.74■■■□□ 2.03
PAX3-201ENST00000258387 FOXO3O43524 673 aa27.74■■■□□ 2.03
PAX3-201ENST00000258387 XPCQ01831 940 aaPredicted RBP27.74■■■□□ 2.03
PAX3-201ENST00000258387 RBM6P78332 1123 aaKnown RBP27.73■■■□□ 2.03
PAX3-201ENST00000258387 PLEKHH1Q9ULM0 1364 aa27.72■■■□□ 2.03
PAX3-201ENST00000258387 NPHP3Q7Z494 1330 aa27.71■■■□□ 2.03
PAX3-201ENST00000258387 ABCC11Q96J66 1382 aa27.71■■■□□ 2.03
PAX3-201ENST00000258387 USP21Q9UK80 565 aa27.7■■■□□ 2.02
PAX3-201ENST00000258387 ACIN1Q9UKV3 1341 aaKnown RBP27.68■■■□□ 2.02
PAX3-201ENST00000258387 PIK3C2GO75747 1445 aa27.67■■■□□ 2.02
PAX3-201ENST00000258387 CFAP70Q5T0N1 1121 aa27.67■■■□□ 2.02
PAX3-201ENST00000258387 C14orf93Q9H972 538 aaKnown RBP27.67■■■□□ 2.02
PAX3-201ENST00000258387 CDK12Q9NYV4 1490 aaPredicted RBP27.67■■■□□ 2.02
PAX3-201ENST00000258387 TECPR2O15040 1411 aa27.67■■■□□ 2.02
PAX3-201ENST00000258387 LAMC1P11047 1609 aa27.66■■■□□ 2.02
PAX3-201ENST00000258387 YTHDC2Q9H6S0 1430 aaKnown RBP27.65■■■□□ 2.02
PAX3-201ENST00000258387 CDC42BPGQ6DT37 1551 aa27.65■■■□□ 2.02
PAX3-201ENST00000258387 RGS12O14924 1447 aa27.62■■■□□ 2.01
PAX3-201ENST00000258387 FNBP4Q8N3X1 1017 aaPredicted RBP27.62■■■□□ 2.01
PAX3-201ENST00000258387 TRPC5Q9UL62 973 aaPredicted RBP27.62■■■□□ 2.01
PAX3-201ENST00000258387 RAB3GAP2Q9H2M9 1393 aa27.61■■■□□ 2.01
PAX3-201ENST00000258387 SAFB2Q14151 953 aaKnown RBP eCLIP27.61■■■□□ 2.01
PAX3-201ENST00000258387 SIRT1Q96EB6 747 aa27.61■■■□□ 2.01
PAX3-201ENST00000258387 DHX57Q6P158 1386 aaKnown RBP27.6■■■□□ 2.01
PAX3-201ENST00000258387 PXDNQ92626 1479 aa27.59■■■□□ 2.01
PAX3-201ENST00000258387 IFT172Q9UG01 1749 aa27.59■■■□□ 2.01
PAX3-201ENST00000258387 KRT28Q7Z3Y7 464 aa27.57■■■□□ 2
PAX3-201ENST00000258387 PRAM1Q96QH2 718 aa27.57■■■□□ 2
PAX3-201ENST00000258387 POGKQ9P215 609 aa27.55■■■□□ 2
PAX3-201ENST00000258387 MYOM2P54296 1465 aa27.55■■■□□ 2
PAX3-201ENST00000258387 KDM2AQ9Y2K7 1162 aa27.54■■■□□ 2
PAX3-201ENST00000258387 PLEKHG5O94827 1062 aa27.53■■■□□ 2
PAX3-201ENST00000258387 PHF8Q9UPP1 1060 aa27.53■■■□□ 2
PAX3-201ENST00000258387 SPATA31A3Q5VYP0 1347 aa27.52■■■□□ 2
PAX3-201ENST00000258387 NRXN1Q9ULB1 1477 aa27.51■■■□□ 2
PAX3-201ENST00000258387 COL22A1Q8NFW1 1626 aaPredicted RBP27.51■■□□□ 1.99
PAX3-201ENST00000258387 KNDC1Q76NI1 1749 aa27.5■■□□□ 1.99
PAX3-201ENST00000258387 ATRNO75882 1429 aa27.5■■□□□ 1.99
PAX3-201ENST00000258387 PSME1Q06323 249 aa27.49■■□□□ 1.99
PAX3-201ENST00000258387 TRAK1Q9UPV9 953 aa27.49■■□□□ 1.99
PAX3-201ENST00000258387 LMOD2Q6P5Q4 547 aa27.48■■□□□ 1.99
PAX3-201ENST00000258387 DCAF11Q8TEB1 546 aa27.48■■□□□ 1.99
PAX3-201ENST00000258387 BCL9LQ86UU0 1499 aa27.47■■□□□ 1.99
PAX3-201ENST00000258387 HAP1P54257 671 aaPredicted RBP27.47■■□□□ 1.99
PAX3-201ENST00000258387 PMFBP1Q8TBY8 1022 aa27.46■■□□□ 1.99
PAX3-201ENST00000258387 CABLES1Q8TDN4 633 aa27.46■■□□□ 1.99
PAX3-201ENST00000258387 GJD4Q96KN9 370 aaPredicted RBP27.46■■□□□ 1.99
PAX3-201ENST00000258387 FMN2Q9NZ56 1722 aa27.46■■□□□ 1.99
PAX3-201ENST00000258387 HIRIP3Q9BW71 556 aaPredicted RBP27.45■■□□□ 1.98
PAX3-201ENST00000258387 ATAD2Q6PL18 1390 aa27.45■■□□□ 1.98
PAX3-201ENST00000258387 UNC5CLQ8IV45 518 aa27.43■■□□□ 1.98
PAX3-201ENST00000258387 MINK1Q8N4C8 1332 aaPredicted RBP27.41■■□□□ 1.98
PAX3-201ENST00000258387 KIF1AQ12756 1690 aa27.39■■□□□ 1.97
PAX3-201ENST00000258387 TNS3Q68CZ2 1445 aa27.38■■□□□ 1.97
PAX3-201ENST00000258387 HRCP23327 699 aa27.36■■□□□ 1.97
PAX3-201ENST00000258387 DLC1Q96QB1 1528 aa27.36■■□□□ 1.97
PAX3-201ENST00000258387 SBNO1A3KN83 1393 aa27.35■■□□□ 1.97
PAX3-201ENST00000258387 RGPD8O14715 1765 aaPredicted RBP27.35■■□□□ 1.97
PAX3-201ENST00000258387 ADGRB1O14514 1584 aa27.34■■□□□ 1.97
PAX3-201ENST00000258387 SLIT2O94813 1529 aa27.33■■□□□ 1.97
PAX3-201ENST00000258387 STAC3Q96MF2 364 aa27.33■■□□□ 1.97
PAX3-201ENST00000258387 CCDC9Q9Y3X0 531 aaKnown RBP27.33■■□□□ 1.97
PAX3-201ENST00000258387 ANKARQ7Z5J8 1434 aa27.33■■□□□ 1.96
PAX3-201ENST00000258387 WASLO00401 505 aaPredicted RBP27.32■■□□□ 1.96
PAX3-201ENST00000258387 MARF1Q9Y4F3 1742 aaKnown RBP27.31■■□□□ 1.96
PAX3-201ENST00000258387 PRR36Q9H6K5 1346 aa27.31■■□□□ 1.96
PAX3-201ENST00000258387 ARHGEF10O15013 1369 aa27.31■■□□□ 1.96
PAX3-201ENST00000258387 RALGAPBQ86X10 1494 aa27.31■■□□□ 1.96
PAX3-201ENST00000258387 FAM83GA6ND36 823 aa27.3■■□□□ 1.96
PAX3-201ENST00000258387 GPRASP1Q5JY77 1395 aa27.28■■□□□ 1.96
PAX3-201ENST00000258387 VPS72Q15906 364 aa27.28■■□□□ 1.96
PAX3-201ENST00000258387 NGDNQ8NEJ9 315 aaKnown RBP27.28■■□□□ 1.96
PAX3-201ENST00000258387 CCDC125Q86Z20 511 aa27.27■■□□□ 1.96
PAX3-201ENST00000258387 USP32Q8NFA0 1604 aa27.27■■□□□ 1.96
PAX3-201ENST00000258387 SEPT12Q8IYM1 358 aa27.26■■□□□ 1.95
PAX3-201ENST00000258387 EIF3AQ14152 1382 aaKnown RBP27.25■■□□□ 1.95
PAX3-201ENST00000258387 PAK3O75914 559 aaPredicted RBP27.25■■□□□ 1.95
PAX3-201ENST00000258387 ADGRB2O60241 1585 aa27.22■■□□□ 1.95
PAX3-201ENST00000258387 GLI3P10071 1580 aa27.22■■□□□ 1.95
PAX3-201ENST00000258387 EP400Q96L91 3159 aa27.22■■□□□ 1.95
PAX3-201ENST00000258387 ZRANB1Q9UGI0 708 aa27.22■■□□□ 1.95
PAX3-201ENST00000258387 NUDT16Q96DE0 195 aaKnown RBP27.21■■□□□ 1.95
PAX3-201ENST00000258387 BTG4Q9NY30 223 aa27.21■■□□□ 1.95
PAX3-201ENST00000258387 A0A0G2JS52 829 aa27.2■■□□□ 1.94
PAX3-201ENST00000258387 MYT1Q01538 1121 aa27.2■■□□□ 1.94
PAX3-201ENST00000258387 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.2■■□□□ 1.94
PAX3-201ENST00000258387 CDK19Q9BWU1 502 aa27.19■■□□□ 1.94
PAX3-201ENST00000258387 TULP4Q9NRJ4 1543 aa27.19■■□□□ 1.94
PAX3-201ENST00000258387 ONECUT3O60422 494 aaPredicted RBP27.18■■□□□ 1.94
PAX3-201ENST00000258387 KRT27Q7Z3Y8 459 aa27.15■■□□□ 1.94
PAX3-201ENST00000258387 FAM98CQ17RN3 349 aaKnown RBP27.14■■□□□ 1.94
PAX3-201ENST00000258387 NBPF1Q3BBV0 1214 aa27.14■■□□□ 1.94
PAX3-201ENST00000258387 DEFB132Q7Z7B7 95 aa27.14■■□□□ 1.94
PAX3-201ENST00000258387 SRCAPQ6ZRS2 3230 aa27.13■■□□□ 1.93
PAX3-201ENST00000258387 SF3B2Q13435 895 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms