RNA–Protein interactions for RNA: ENST00000258052.7

SMPD2-201, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD2, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-201ENST00000258052 CCER2I3L3R5 266 aa29.08■■■□□ 2.25
SMPD2-201ENST00000258052 PUS7Q96PZ0 661 aaKnown RBP29.07■■■□□ 2.24
SMPD2-201ENST00000258052 ROBO2Q9HCK4 1378 aa29.06■■■□□ 2.24
SMPD2-201ENST00000258052 PER1O15534 1290 aaPredicted RBP29.05■■■□□ 2.24
SMPD2-201ENST00000258052 CABP2Q9NPB3 220 aa29.05■■■□□ 2.24
SMPD2-201ENST00000258052 AMOTL2Q9Y2J4 779 aa29.05■■■□□ 2.24
SMPD2-201ENST00000258052 SRPK2P78362 688 aaKnown RBP29.05■■■□□ 2.24
SMPD2-201ENST00000258052 NPHP4O75161 1426 aaPredicted RBP29.04■■■□□ 2.24
SMPD2-201ENST00000258052 TMC1Q8TDI8 760 aa29.03■■■□□ 2.24
SMPD2-201ENST00000258052 NCKAP5LQ9HCH0 1330 aa29.02■■■□□ 2.24
SMPD2-201ENST00000258052 PIK3R4Q99570 1358 aa29.01■■■□□ 2.24
SMPD2-201ENST00000258052 XRN1Q8IZH2 1706 aaKnown RBP29.01■■■□□ 2.23
SMPD2-201ENST00000258052 CDK19Q9BWU1 502 aa29.01■■■□□ 2.23
SMPD2-201ENST00000258052 SLC12A5Q9H2X9 1139 aa28.98■■■□□ 2.23
SMPD2-201ENST00000258052 KNSTRNQ9Y448 316 aa28.98■■■□□ 2.23
SMPD2-201ENST00000258052 PTCH1Q13635 1447 aa28.98■■■□□ 2.23
SMPD2-201ENST00000258052 ATAD2Q6PL18 1390 aa28.97■■■□□ 2.23
SMPD2-201ENST00000258052 KTN1Q86UP2 1357 aaKnown RBP28.97■■■□□ 2.23
SMPD2-201ENST00000258052 YTHDC1Q96MU7 727 aaKnown RBP28.96■■■□□ 2.23
SMPD2-201ENST00000258052 CHD2O14647 1828 aaKnown RBP28.96■■■□□ 2.23
SMPD2-201ENST00000258052 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.96■■■□□ 2.23
SMPD2-201ENST00000258052 WASLO00401 505 aaPredicted RBP28.94■■■□□ 2.22
SMPD2-201ENST00000258052 KCNA6P17658 529 aa28.93■■■□□ 2.22
SMPD2-201ENST00000258052 CC2D1BQ5T0F9 858 aaKnown RBP28.93■■■□□ 2.22
SMPD2-201ENST00000258052 NINLQ9Y2I6 1382 aa28.93■■■□□ 2.22
SMPD2-201ENST00000258052 RALBP1Q15311 655 aa28.92■■■□□ 2.22
SMPD2-201ENST00000258052 HSPA2P54652 639 aa28.91■■■□□ 2.22
SMPD2-201ENST00000258052 ADGRB2O60241 1585 aa28.91■■■□□ 2.22
SMPD2-201ENST00000258052 CARD14Q9BXL6 1004 aa28.91■■■□□ 2.22
SMPD2-201ENST00000258052 PARD3Q8TEW0 1356 aa28.89■■■□□ 2.22
SMPD2-201ENST00000258052 LMTK3Q96Q04 1460 aa28.89■■■□□ 2.21
SMPD2-201ENST00000258052 ANKRD36BQ8N2N9 1353 aa28.88■■■□□ 2.21
SMPD2-201ENST00000258052 AMER1Q5JTC6 1135 aaPredicted RBP28.87■■■□□ 2.21
SMPD2-201ENST00000258052 NSD3Q9BZ95 1437 aa28.87■■■□□ 2.21
SMPD2-201ENST00000258052 CCDC184Q52MB2 194 aa28.86■■■□□ 2.21
SMPD2-201ENST00000258052 MYBBP1AQ9BQG0 1328 aaKnown RBP28.85■■■□□ 2.21
SMPD2-201ENST00000258052 MRS2Q9HD23 443 aa28.84■■■□□ 2.21
SMPD2-201ENST00000258052 NPC1L1Q9UHC9 1359 aa28.83■■■□□ 2.21
SMPD2-201ENST00000258052 CABP1Q9NZU7 370 aa28.83■■■□□ 2.21
SMPD2-201ENST00000258052 A0A1W2PP64 1363 aa28.82■■■□□ 2.2
SMPD2-201ENST00000258052 NUDT16Q96DE0 195 aaKnown RBP28.81■■■□□ 2.2
SMPD2-201ENST00000258052 TERF2IPQ9NYB0 399 aa28.81■■■□□ 2.2
SMPD2-201ENST00000258052 CD163L1Q9NR16 1453 aa28.8■■■□□ 2.2
SMPD2-201ENST00000258052 USP32Q8NFA0 1604 aa28.79■■■□□ 2.2
SMPD2-201ENST00000258052 NWD1Q149M9 1564 aa28.79■■■□□ 2.2
SMPD2-201ENST00000258052 PPIP5K1Q6PFW1 1433 aa28.79■■■□□ 2.2
SMPD2-201ENST00000258052 HDGFL2Q7Z4V5 671 aaPredicted RBP28.79■■■□□ 2.2
SMPD2-201ENST00000258052 ATP7BP35670 1465 aa28.78■■■□□ 2.2
SMPD2-201ENST00000258052 PRR36Q9H6K5 1346 aa28.77■■■□□ 2.2
SMPD2-201ENST00000258052 CCDC61Q9Y6R9 512 aa28.76■■■□□ 2.19
SMPD2-201ENST00000258052 STRCQ7RTU9 1775 aa28.75■■■□□ 2.19
SMPD2-201ENST00000258052 CGNL1Q0VF96 1302 aa28.74■■■□□ 2.19
SMPD2-201ENST00000258052 NALCNQ8IZF0 1738 aa28.74■■■□□ 2.19
SMPD2-201ENST00000258052 NLRP13Q86W25 1043 aa28.74■■■□□ 2.19
SMPD2-201ENST00000258052 BRD4O60885 1362 aaPredicted RBP28.74■■■□□ 2.19
SMPD2-201ENST00000258052 TOPAZ1Q8N9V7 1692 aa28.73■■■□□ 2.19
SMPD2-201ENST00000258052 NUTM2FA1L443 756 aa28.73■■■□□ 2.19
SMPD2-201ENST00000258052 RBM33Q96EV2 1170 aaKnown RBP28.72■■■□□ 2.19
SMPD2-201ENST00000258052 CDC42BPGQ6DT37 1551 aa28.71■■■□□ 2.19
SMPD2-201ENST00000258052 ITSN1Q15811 1721 aa28.7■■■□□ 2.19
SMPD2-201ENST00000258052 FMN2Q9NZ56 1722 aa28.69■■■□□ 2.18
SMPD2-201ENST00000258052 FAM9BQ8IZU0 186 aa28.69■■■□□ 2.18
SMPD2-201ENST00000258052 PPP2R1AP30153 589 aa28.68■■■□□ 2.18
SMPD2-201ENST00000258052 NKTRP30414 1462 aaKnown RBP28.68■■■□□ 2.18
SMPD2-201ENST00000258052 CPSF1Q10570 1443 aaKnown RBP28.67■■■□□ 2.18
SMPD2-201ENST00000258052 ADGRL3Q9HAR2 1447 aa28.67■■■□□ 2.18
SMPD2-201ENST00000258052 RGPD8O14715 1765 aaPredicted RBP28.67■■■□□ 2.18
SMPD2-201ENST00000258052 AKAP12Q02952 1782 aa28.67■■■□□ 2.18
SMPD2-201ENST00000258052 NSD2O96028 1365 aa28.67■■■□□ 2.18
SMPD2-201ENST00000258052 CENPBP07199 599 aaPredicted RBP28.66■■■□□ 2.18
SMPD2-201ENST00000258052 C14orf37Q86TY3 774 aa28.65■■■□□ 2.18
SMPD2-201ENST00000258052 MORC1Q86VD1 984 aa28.65■■■□□ 2.18
SMPD2-201ENST00000258052 PROSER2Q86WR7 435 aaPredicted RBP28.65■■■□□ 2.18
SMPD2-201ENST00000258052 STRCP1A6NGW2 1772 aa28.65■■■□□ 2.18
SMPD2-201ENST00000258052 MON2Q7Z3U7 1717 aa28.64■■■□□ 2.18
SMPD2-201ENST00000258052 KIF20BQ96Q89 1820 aa28.64■■■□□ 2.18
SMPD2-201ENST00000258052 ANKARQ7Z5J8 1434 aa28.64■■■□□ 2.17
SMPD2-201ENST00000258052 PLEKHG3A1L390 1219 aa28.62■■■□□ 2.17
SMPD2-201ENST00000258052 ANKRD26Q9UPS8 1709 aa28.61■■■□□ 2.17
SMPD2-201ENST00000258052 EDC4Q6P2E9 1401 aaKnown RBP28.61■■■□□ 2.17
SMPD2-201ENST00000258052 ZNF692Q9BU19 519 aaPredicted RBP28.6■■■□□ 2.17
SMPD2-201ENST00000258052 ACEP12821 1306 aa28.59■■■□□ 2.17
SMPD2-201ENST00000258052 FYB1O15117 783 aa28.59■■■□□ 2.17
SMPD2-201ENST00000258052 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.59■■■□□ 2.17
SMPD2-201ENST00000258052 PNISRQ8TF01 805 aaKnown RBP28.59■■■□□ 2.17
SMPD2-201ENST00000258052 GGNBP2Q9H3C7 697 aa28.59■■■□□ 2.17
SMPD2-201ENST00000258052 TNNT2P45379 298 aaPredicted RBP28.58■■■□□ 2.17
SMPD2-201ENST00000258052 PMFBP1Q8TBY8 1022 aa28.57■■■□□ 2.16
SMPD2-201ENST00000258052 TMEM94Q12767 1356 aa28.53■■■□□ 2.16
SMPD2-201ENST00000258052 NRKQ7Z2Y5 1582 aa28.53■■■□□ 2.16
SMPD2-201ENST00000258052 NGDNQ8NEJ9 315 aaKnown RBP28.52■■■□□ 2.16
SMPD2-201ENST00000258052 USP6P35125 1406 aa28.52■■■□□ 2.16
SMPD2-201ENST00000258052 HNRNPUQ00839 825 aaKnown RBP eCLIP28.51■■■□□ 2.15
SMPD2-201ENST00000258052 POLR3AO14802 1390 aaPredicted RBP28.51■■■□□ 2.15
SMPD2-201ENST00000258052 NME9Q86XW9 330 aa28.49■■■□□ 2.15
SMPD2-201ENST00000258052 C19orf44Q9H6X5 657 aa28.49■■■□□ 2.15
SMPD2-201ENST00000258052 NCOA3Q9Y6Q9 1424 aa28.48■■■□□ 2.15
SMPD2-201ENST00000258052 TTC21BQ7Z4L5 1316 aa28.47■■■□□ 2.15
SMPD2-201ENST00000258052 ZNF335Q9H4Z2 1342 aaPredicted RBP28.46■■■□□ 2.15
SMPD2-201ENST00000258052 DMRT2Q9Y5R5 561 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms