RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 LAS1LQ9Y4W2 734 aaKnown RBP19.19■□□□□ 0.66
TRAFD1-201ENST00000257604 PIK3C2GO75747 1445 aa19.18■□□□□ 0.66
TRAFD1-201ENST00000257604 CRBNQ96SW2 442 aa19.18■□□□□ 0.66
TRAFD1-201ENST00000257604 CGNL1Q0VF96 1302 aa19.18■□□□□ 0.66
TRAFD1-201ENST00000257604 CFAP74Q9C0B2 1584 aa19.18■□□□□ 0.66
TRAFD1-201ENST00000257604 BCL2L13Q9BXK5 485 aa19.18■□□□□ 0.66
TRAFD1-201ENST00000257604 ASXL1Q8IXJ9 1541 aa19.17■□□□□ 0.66
TRAFD1-201ENST00000257604 SLC24A1O60721 1099 aa19.17■□□□□ 0.66
TRAFD1-201ENST00000257604 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
TRAFD1-201ENST00000257604 FRAT1Q92837 279 aaPredicted RBP19.17■□□□□ 0.66
TRAFD1-201ENST00000257604 SLC26A8Q96RN1 970 aa19.16■□□□□ 0.66
TRAFD1-201ENST00000257604 MYOM2P54296 1465 aa19.15■□□□□ 0.66
TRAFD1-201ENST00000257604 PDE3BQ13370 1112 aa19.15■□□□□ 0.66
TRAFD1-201ENST00000257604 ADGRB3O60242 1522 aa19.14■□□□□ 0.65
TRAFD1-201ENST00000257604 IQGAP1P46940 1657 aa19.14■□□□□ 0.65
TRAFD1-201ENST00000257604 BCAR3O75815 825 aa19.14■□□□□ 0.65
TRAFD1-201ENST00000257604 CFAP53Q96M91 514 aa19.14■□□□□ 0.65
TRAFD1-201ENST00000257604 ANP32AP39687 249 aaKnown RBP19.13■□□□□ 0.65
TRAFD1-201ENST00000257604 SIGLEC1Q9BZZ2 1709 aa19.12■□□□□ 0.65
TRAFD1-201ENST00000257604 RTL5Q5HYW3 569 aaPredicted RBP19.12■□□□□ 0.65
TRAFD1-201ENST00000257604 ZBTB47Q9UFB7 747 aaPredicted RBP19.12■□□□□ 0.65
TRAFD1-201ENST00000257604 TCP11L2Q8N4U5 519 aa19.11■□□□□ 0.65
TRAFD1-201ENST00000257604 CAMSAP1Q5T5Y3 1602 aa19.11■□□□□ 0.65
TRAFD1-201ENST00000257604 LMTK2Q8IWU2 1503 aa19.11■□□□□ 0.65
TRAFD1-201ENST00000257604 SYNMO15061 1565 aa19.11■□□□□ 0.65
TRAFD1-201ENST00000257604 DUSP27Q5VZP5 1158 aa19.1■□□□□ 0.65
TRAFD1-201ENST00000257604 LAMC1P11047 1609 aa19.1■□□□□ 0.65
TRAFD1-201ENST00000257604 HDGFL2Q7Z4V5 671 aaPredicted RBP19.09■□□□□ 0.65
TRAFD1-201ENST00000257604 TERF2IPQ9NYB0 399 aa19.09■□□□□ 0.65
TRAFD1-201ENST00000257604 ZRANB1Q9UGI0 708 aa19.09■□□□□ 0.65
TRAFD1-201ENST00000257604 KDM5AP29375 1690 aaKnown RBP19.08■□□□□ 0.65
TRAFD1-201ENST00000257604 RBM33Q96EV2 1170 aaKnown RBP19.08■□□□□ 0.65
TRAFD1-201ENST00000257604 CLUAP1Q96AJ1 413 aa19.08■□□□□ 0.64
TRAFD1-201ENST00000257604 ZMYM3Q14202 1370 aa19.08■□□□□ 0.64
TRAFD1-201ENST00000257604 RICTORQ6R327 1708 aa19.07■□□□□ 0.64
TRAFD1-201ENST00000257604 IL27Q8NEV9 243 aa19.07■□□□□ 0.64
TRAFD1-201ENST00000257604 IPO9Q96P70 1041 aaKnown RBP19.07■□□□□ 0.64
TRAFD1-201ENST00000257604 DIP2BQ9P265 1576 aa19.06■□□□□ 0.64
TRAFD1-201ENST00000257604 A0A1W2PP64 1363 aa19.06■□□□□ 0.64
TRAFD1-201ENST00000257604 FYB1O15117 783 aa19.05■□□□□ 0.64
TRAFD1-201ENST00000257604 HMOX1P09601 288 aa19.05■□□□□ 0.64
TRAFD1-201ENST00000257604 YTHDC2Q9H6S0 1430 aaKnown RBP19.04■□□□□ 0.64
TRAFD1-201ENST00000257604 SLFN5Q08AF3 891 aa19.04■□□□□ 0.64
TRAFD1-201ENST00000257604 WWC1Q8IX03 1113 aa19.04■□□□□ 0.64
TRAFD1-201ENST00000257604 TSR2Q969E8 191 aaKnown RBP19.03■□□□□ 0.64
TRAFD1-201ENST00000257604 BLMP54132 1417 aaPredicted RBP19.03■□□□□ 0.64
TRAFD1-201ENST00000257604 RIMS2Q9UQ26 1411 aa19.03■□□□□ 0.64
TRAFD1-201ENST00000257604 RGS3P49796 1198 aa19.02■□□□□ 0.64
TRAFD1-201ENST00000257604 RNF123Q5XPI4 1314 aa19.02■□□□□ 0.64
TRAFD1-201ENST00000257604 NME9Q86XW9 330 aa19.02■□□□□ 0.64
TRAFD1-201ENST00000257604 ADGRB1O14514 1584 aa19.01■□□□□ 0.63
TRAFD1-201ENST00000257604 NEXMIFQ5QGS0 1516 aa19.01■□□□□ 0.63
TRAFD1-201ENST00000257604 NRXN1Q9ULB1 1477 aa19.01■□□□□ 0.63
TRAFD1-201ENST00000257604 RRS1Q15050 365 aaKnown RBP19.01■□□□□ 0.63
TRAFD1-201ENST00000257604 RUNDC1Q96C34 613 aa19.01■□□□□ 0.63
TRAFD1-201ENST00000257604 GLI2P10070 1586 aa19.01■□□□□ 0.63
TRAFD1-201ENST00000257604 MYO5BQ9ULV0 1848 aa19.01■□□□□ 0.63
TRAFD1-201ENST00000257604 PANK1Q8TE04 598 aa19.01■□□□□ 0.63
TRAFD1-201ENST00000257604 PIK3C2BO00750 1634 aa19■□□□□ 0.63
TRAFD1-201ENST00000257604 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
TRAFD1-201ENST00000257604 PMFBP1Q8TBY8 1022 aa19■□□□□ 0.63
TRAFD1-201ENST00000257604 METP08581 1390 aa18.99■□□□□ 0.63
TRAFD1-201ENST00000257604 COG6Q9Y2V7 657 aa18.99■□□□□ 0.63
TRAFD1-201ENST00000257604 PPLO60437 1756 aa18.99■□□□□ 0.63
TRAFD1-201ENST00000257604 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.99■□□□□ 0.63
TRAFD1-201ENST00000257604 SLC4A3P48751 1232 aa18.99■□□□□ 0.63
TRAFD1-201ENST00000257604 ANKRD36BQ8N2N9 1353 aa18.98■□□□□ 0.63
TRAFD1-201ENST00000257604 QRICH2Q9H0J4 1663 aa18.98■□□□□ 0.63
TRAFD1-201ENST00000257604 LTKP29376 864 aa18.98■□□□□ 0.63
TRAFD1-201ENST00000257604 EMILIN1Q9Y6C2 1016 aa18.98■□□□□ 0.63
TRAFD1-201ENST00000257604 ARHGAP31Q2M1Z3 1444 aa18.98■□□□□ 0.63
TRAFD1-201ENST00000257604 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.98■□□□□ 0.63
TRAFD1-201ENST00000257604 TNNQ9UQP3 1299 aa18.98■□□□□ 0.63
TRAFD1-201ENST00000257604 MYOM1P52179 1685 aa18.98■□□□□ 0.63
TRAFD1-201ENST00000257604 E9PSI1 815 aa18.97■□□□□ 0.63
TRAFD1-201ENST00000257604 SBNO2Q9Y2G9 1366 aa18.97■□□□□ 0.63
TRAFD1-201ENST00000257604 C14orf37Q86TY3 774 aa18.97■□□□□ 0.63
TRAFD1-201ENST00000257604 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
TRAFD1-201ENST00000257604 NUTM2GQ5VZR2 741 aa18.97■□□□□ 0.63
TRAFD1-201ENST00000257604 NUDT16Q96DE0 195 aaKnown RBP18.97■□□□□ 0.63
TRAFD1-201ENST00000257604 ELL2O00472 640 aaPredicted RBP18.96■□□□□ 0.63
TRAFD1-201ENST00000257604 CLTCQ00610 1675 aaKnown RBP18.96■□□□□ 0.63
TRAFD1-201ENST00000257604 TULP4Q9NRJ4 1543 aa18.96■□□□□ 0.63
TRAFD1-201ENST00000257604 THUMPD2Q9BTF0 503 aaKnown RBP18.95■□□□□ 0.62
TRAFD1-201ENST00000257604 NEFMP07197 916 aa18.95■□□□□ 0.62
TRAFD1-201ENST00000257604 DIAPH1O60610 1272 aaKnown RBP18.95■□□□□ 0.62
TRAFD1-201ENST00000257604 HDGFP51858 240 aaKnown RBP18.95■□□□□ 0.62
TRAFD1-201ENST00000257604 ZBTB7CA1YPR0 619 aa18.94■□□□□ 0.62
TRAFD1-201ENST00000257604 WASLO00401 505 aaPredicted RBP18.94■□□□□ 0.62
TRAFD1-201ENST00000257604 TNRQ92752 1358 aa18.94■□□□□ 0.62
TRAFD1-201ENST00000257604 NPC1L1Q9UHC9 1359 aa18.94■□□□□ 0.62
TRAFD1-201ENST00000257604 RIPK4P57078 832 aa18.93■□□□□ 0.62
TRAFD1-201ENST00000257604 ZMYM4Q5VZL5 1548 aa18.93■□□□□ 0.62
TRAFD1-201ENST00000257604 IFT172Q9UG01 1749 aa18.93■□□□□ 0.62
TRAFD1-201ENST00000257604 PREX1Q8TCU6 1659 aa18.93■□□□□ 0.62
TRAFD1-201ENST00000257604 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRAFD1-201ENST00000257604 EID1Q9Y6B2 187 aa18.93■□□□□ 0.62
TRAFD1-201ENST00000257604 ATAD2Q6PL18 1390 aa18.92■□□□□ 0.62
TRAFD1-201ENST00000257604 KIAA1210Q9ULL0 1709 aa18.92■□□□□ 0.62
TRAFD1-201ENST00000257604 A2ML1A8K2U0 1454 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 233.8 ms