RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 CEP152O94986 1710 aa18.84■□□□□ 0.61
MSI1-201ENST00000257552 SAFB2Q14151 953 aaKnown RBP eCLIP18.84■□□□□ 0.61
MSI1-201ENST00000257552 TRMT2AQ8IZ69 625 aaKnown RBP18.84■□□□□ 0.61
MSI1-201ENST00000257552 EFCAB6Q5THR3 1501 aa18.84■□□□□ 0.61
MSI1-201ENST00000257552 YEATS2Q9ULM3 1422 aa18.84■□□□□ 0.61
MSI1-201ENST00000257552 MAPK8IP3Q9UPT6 1336 aa18.84■□□□□ 0.61
MSI1-201ENST00000257552 FRMPD1Q5SYB0 1578 aa18.84■□□□□ 0.61
MSI1-201ENST00000257552 CGNL1Q0VF96 1302 aa18.83■□□□□ 0.6
MSI1-201ENST00000257552 E9PSI1 815 aa18.82■□□□□ 0.6
MSI1-201ENST00000257552 MLECQ14165 292 aa18.82■□□□□ 0.6
MSI1-201ENST00000257552 NEUROD2Q15784 382 aa18.82■□□□□ 0.6
MSI1-201ENST00000257552 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
MSI1-201ENST00000257552 NKTRP30414 1462 aaKnown RBP18.82■□□□□ 0.6
MSI1-201ENST00000257552 CENPJQ9HC77 1338 aaPredicted RBP18.81■□□□□ 0.6
MSI1-201ENST00000257552 PKNOX2Q96KN3 472 aa18.81■□□□□ 0.6
MSI1-201ENST00000257552 VSIG10Q8N0Z9 540 aa18.8■□□□□ 0.6
MSI1-201ENST00000257552 HECW2Q9P2P5 1572 aa18.8■□□□□ 0.6
MSI1-201ENST00000257552 ABCA6Q8N139 1617 aa18.8■□□□□ 0.6
MSI1-201ENST00000257552 RNF17Q9BXT8 1623 aaKnown RBP18.8■□□□□ 0.6
MSI1-201ENST00000257552 CDCA8Q53HL2 280 aa18.79■□□□□ 0.6
MSI1-201ENST00000257552 TNNQ9UQP3 1299 aa18.79■□□□□ 0.6
MSI1-201ENST00000257552 TNNT2P45379 298 aaPredicted RBP18.79■□□□□ 0.6
MSI1-201ENST00000257552 IDI1Q13907 227 aa18.79■□□□□ 0.6
MSI1-201ENST00000257552 FBXO31Q5XUX0 539 aaPredicted RBP18.79■□□□□ 0.6
MSI1-201ENST00000257552 STAC3Q96MF2 364 aa18.79■□□□□ 0.6
MSI1-201ENST00000257552 TBC1D32Q96NH3 1257 aa18.79■□□□□ 0.6
MSI1-201ENST00000257552 BCL2L13Q9BXK5 485 aa18.79■□□□□ 0.6
MSI1-201ENST00000257552 MCM4P33991 863 aa18.78■□□□□ 0.6
MSI1-201ENST00000257552 PDE3AQ14432 1141 aa18.78■□□□□ 0.6
MSI1-201ENST00000257552 GLIPR1L2Q4G1C9 344 aa18.78■□□□□ 0.6
MSI1-201ENST00000257552 STK26Q9P289 416 aa18.78■□□□□ 0.6
MSI1-201ENST00000257552 LAMC1P11047 1609 aa18.78■□□□□ 0.6
MSI1-201ENST00000257552 PCDHB15Q9Y5E8 787 aa18.78■□□□□ 0.6
MSI1-201ENST00000257552 PDZRN3Q9UPQ7 1066 aa18.77■□□□□ 0.6
MSI1-201ENST00000257552 MROH2AA6NES4 1674 aa18.76■□□□□ 0.59
MSI1-201ENST00000257552 RRP7AQ9Y3A4 280 aaKnown RBP18.76■□□□□ 0.59
MSI1-201ENST00000257552 HSP90AA2PQ14568 343 aaPredicted RBP18.75■□□□□ 0.59
MSI1-201ENST00000257552 HSP90AA1P07900 732 aaKnown RBP18.75■□□□□ 0.59
MSI1-201ENST00000257552 FSD2A1L4K1 749 aa18.75■□□□□ 0.59
MSI1-201ENST00000257552 TRAK2O60296 914 aa18.75■□□□□ 0.59
MSI1-201ENST00000257552 NEO1Q92859 1461 aa18.75■□□□□ 0.59
MSI1-201ENST00000257552 CLCN1P35523 988 aa18.74■□□□□ 0.59
MSI1-201ENST00000257552 CARD14Q9BXL6 1004 aa18.74■□□□□ 0.59
MSI1-201ENST00000257552 NLRP1Q9C000 1473 aa18.74■□□□□ 0.59
MSI1-201ENST00000257552 RLBP1P12271 317 aa18.74■□□□□ 0.59
MSI1-201ENST00000257552 SLC12A5Q9H2X9 1139 aa18.74■□□□□ 0.59
MSI1-201ENST00000257552 MAP3K4Q9Y6R4 1608 aa18.73■□□□□ 0.59
MSI1-201ENST00000257552 ABCC3O15438 1527 aa18.73■□□□□ 0.59
MSI1-201ENST00000257552 IQGAP1P46940 1657 aa18.73■□□□□ 0.59
MSI1-201ENST00000257552 KIF1BO60333 1816 aa18.73■□□□□ 0.59
MSI1-201ENST00000257552 CFAP74Q9C0B2 1584 aa18.73■□□□□ 0.59
MSI1-201ENST00000257552 MFAP1P55081 439 aaKnown RBP18.72■□□□□ 0.59
MSI1-201ENST00000257552 PMFBP1Q8TBY8 1022 aa18.72■□□□□ 0.59
MSI1-201ENST00000257552 WWC1Q8IX03 1113 aa18.72■□□□□ 0.59
MSI1-201ENST00000257552 ZMYND15Q9H091 742 aa18.72■□□□□ 0.59
MSI1-201ENST00000257552 C14orf93Q9H972 538 aaKnown RBP18.71■□□□□ 0.59
MSI1-201ENST00000257552 STAG3Q9UJ98 1225 aa18.7■□□□□ 0.58
MSI1-201ENST00000257552 LMTK2Q8IWU2 1503 aa18.7■□□□□ 0.58
MSI1-201ENST00000257552 TSPOAP1O95153 1857 aa18.7■□□□□ 0.58
MSI1-201ENST00000257552 MYOM2P54296 1465 aa18.69■□□□□ 0.58
MSI1-201ENST00000257552 DIP2CQ9Y2E4 1556 aa18.69■□□□□ 0.58
MSI1-201ENST00000257552 ERVK-7P63135 1459 aa18.69■□□□□ 0.58
MSI1-201ENST00000257552 MYH16Q9H6N6 1097 aa18.69■□□□□ 0.58
MSI1-201ENST00000257552 CHMP5Q9NZZ3 219 aa18.69■□□□□ 0.58
MSI1-201ENST00000257552 RARSP54136 660 aaKnown RBP18.68■□□□□ 0.58
MSI1-201ENST00000257552 C22orf23Q9BZE7 217 aa18.68■□□□□ 0.58
MSI1-201ENST00000257552 ADGRB3O60242 1522 aa18.68■□□□□ 0.58
MSI1-201ENST00000257552 PIK3C2GO75747 1445 aa18.67■□□□□ 0.58
MSI1-201ENST00000257552 VGFO15240 615 aaPredicted RBP18.67■□□□□ 0.58
MSI1-201ENST00000257552 MRE11P49959 708 aa18.67■□□□□ 0.58
MSI1-201ENST00000257552 RIMBP3CA6NJZ7 1639 aa18.67■□□□□ 0.58
MSI1-201ENST00000257552 RIMBP3BA6NNM3 1639 aa18.67■□□□□ 0.58
MSI1-201ENST00000257552 RIMBP3Q9UFD9 1639 aa18.67■□□□□ 0.58
MSI1-201ENST00000257552 RWDD1Q9H446 243 aaPredicted RBP18.66■□□□□ 0.58
MSI1-201ENST00000257552 GRPEL1Q9HAV7 217 aa18.66■□□□□ 0.58
MSI1-201ENST00000257552 CABP2Q9NPB3 220 aa18.66■□□□□ 0.58
MSI1-201ENST00000257552 ASXL1Q8IXJ9 1541 aa18.65■□□□□ 0.58
MSI1-201ENST00000257552 SIGLEC1Q9BZZ2 1709 aa18.65■□□□□ 0.58
MSI1-201ENST00000257552 ERBB4Q15303 1308 aa18.64■□□□□ 0.58
MSI1-201ENST00000257552 ESPNB1AK53 854 aa18.64■□□□□ 0.57
MSI1-201ENST00000257552 RRP9O43818 475 aaKnown RBP18.63■□□□□ 0.57
MSI1-201ENST00000257552 CAMSAP1Q5T5Y3 1602 aa18.62■□□□□ 0.57
MSI1-201ENST00000257552 RICTORQ6R327 1708 aa18.62■□□□□ 0.57
MSI1-201ENST00000257552 PLPPR3Q6T4P5 718 aa18.61■□□□□ 0.57
MSI1-201ENST00000257552 TRIM44Q96DX7 344 aaPredicted RBP18.61■□□□□ 0.57
MSI1-201ENST00000257552 NRXN1Q9ULB1 1477 aa18.61■□□□□ 0.57
MSI1-201ENST00000257552 SYNMO15061 1565 aa18.61■□□□□ 0.57
MSI1-201ENST00000257552 HSCBQ8IWL3 235 aa18.61■□□□□ 0.57
MSI1-201ENST00000257552 RPGRIP1LQ68CZ1 1315 aa18.61■□□□□ 0.57
MSI1-201ENST00000257552 NINLQ9Y2I6 1382 aa18.61■□□□□ 0.57
MSI1-201ENST00000257552 MINK1Q8N4C8 1332 aaPredicted RBP18.6■□□□□ 0.57
MSI1-201ENST00000257552 SRPK2P78362 688 aaKnown RBP18.6■□□□□ 0.57
MSI1-201ENST00000257552 TCP11L2Q8N4U5 519 aa18.6■□□□□ 0.57
MSI1-201ENST00000257552 SLC52A1Q9NWF4 448 aa18.6■□□□□ 0.57
MSI1-201ENST00000257552 MORC1Q86VD1 984 aa18.6■□□□□ 0.57
MSI1-201ENST00000257552 NSD3Q9BZ95 1437 aa18.59■□□□□ 0.57
MSI1-201ENST00000257552 KDM5AP29375 1690 aaKnown RBP18.58■□□□□ 0.57
MSI1-201ENST00000257552 MYOM1P52179 1685 aa18.58■□□□□ 0.56
MSI1-201ENST00000257552 GAS2L3Q86XJ1 694 aa18.58■□□□□ 0.56
MSI1-201ENST00000257552 FTSJ3Q8IY81 847 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms