RNA–Protein interactions for RNA: ENST00000255531.8

PCDH19-201, Transcript of protocadherin 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH19, Length 7,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-201ENST00000255531 SEPT14Q6ZU15 432 aa11.46□□□□□ -0.57
PCDH19-201ENST00000255531 UBE2Q2Q8WVN8 375 aa11.46□□□□□ -0.57
PCDH19-201ENST00000255531 TMF1P82094 1093 aa11.46□□□□□ -0.58
PCDH19-201ENST00000255531 FBXW7Q969H0 707 aa11.45□□□□□ -0.58
PCDH19-201ENST00000255531 SMC4Q9NTJ3 1288 aa11.45□□□□□ -0.58
PCDH19-201ENST00000255531 SARNPP82979 210 aaKnown RBP11.45□□□□□ -0.58
PCDH19-201ENST00000255531 CTDP1Q9Y5B0 961 aaPredicted RBP11.45□□□□□ -0.58
PCDH19-201ENST00000255531 GIGYF2Q6Y7W6 1299 aaKnown RBP11.45□□□□□ -0.58
PCDH19-201ENST00000255531 DZIP1Q86YF9 867 aaKnown RBP11.45□□□□□ -0.58
PCDH19-201ENST00000255531 HOMEZQ8IX15 550 aa11.45□□□□□ -0.58
PCDH19-201ENST00000255531 FRAT2O75474 233 aaPredicted RBP11.45□□□□□ -0.58
PCDH19-201ENST00000255531 CCDC6Q16204 474 aa11.45□□□□□ -0.58
PCDH19-201ENST00000255531 KTN1Q86UP2 1357 aaKnown RBP11.45□□□□□ -0.58
PCDH19-201ENST00000255531 E9PSI1 815 aa11.44□□□□□ -0.58
PCDH19-201ENST00000255531 TRIM34Q9BYJ4 488 aa11.44□□□□□ -0.58
PCDH19-201ENST00000255531 FAM184BQ9ULE4 1060 aa11.44□□□□□ -0.58
PCDH19-201ENST00000255531 EEA1Q15075 1411 aa11.44□□□□□ -0.58
PCDH19-201ENST00000255531 RILPL2Q969X0 211 aa11.44□□□□□ -0.58
PCDH19-201ENST00000255531 CTR9Q6PD62 1173 aa11.44□□□□□ -0.58
PCDH19-201ENST00000255531 TSPY26PQ9H489 355 aa11.44□□□□□ -0.58
PCDH19-201ENST00000255531 RBM28Q9NW13 759 aaKnown RBP11.44□□□□□ -0.58
PCDH19-201ENST00000255531 LRRFIP2Q9Y608 721 aaKnown RBP11.44□□□□□ -0.58
PCDH19-201ENST00000255531 MBD3O95983 291 aa11.44□□□□□ -0.58
PCDH19-201ENST00000255531 SMC3Q9UQE7 1217 aa11.44□□□□□ -0.58
PCDH19-201ENST00000255531 PDE4AP27815 886 aa11.44□□□□□ -0.58
PCDH19-201ENST00000255531 SDF4Q9BRK5 362 aa11.44□□□□□ -0.58
PCDH19-201ENST00000255531 WWC2Q6AWC2 1192 aa11.43□□□□□ -0.58
PCDH19-201ENST00000255531 PDCL3Q9H2J4 239 aa11.43□□□□□ -0.58
PCDH19-201ENST00000255531 RGL3Q3MIN7 710 aa11.43□□□□□ -0.58
PCDH19-201ENST00000255531 BRMS1Q9HCU9 246 aa11.43□□□□□ -0.58
PCDH19-201ENST00000255531 NOL3O60936 208 aaKnown RBP11.43□□□□□ -0.58
PCDH19-201ENST00000255531 CCDC160A6NGH7 325 aa11.42□□□□□ -0.58
PCDH19-201ENST00000255531 GCOM1H8Y6P7 765 aaPredicted RBP11.42□□□□□ -0.58
PCDH19-201ENST00000255531 MYZAPP0CAP1 466 aa11.42□□□□□ -0.58
PCDH19-201ENST00000255531 RNF187Q5TA31 235 aaPredicted RBP11.42□□□□□ -0.58
PCDH19-201ENST00000255531 TRDNQ13061 729 aa11.42□□□□□ -0.58
PCDH19-201ENST00000255531 MORC1Q86VD1 984 aa11.42□□□□□ -0.58
PCDH19-201ENST00000255531 KINO60870 393 aaKnown RBP11.42□□□□□ -0.58
PCDH19-201ENST00000255531 IBSPP21815 317 aaPredicted RBP11.42□□□□□ -0.58
PCDH19-201ENST00000255531 SPECC1LQ69YQ0 1117 aa11.42□□□□□ -0.58
PCDH19-201ENST00000255531 CEP83Q9Y592 693 aa11.42□□□□□ -0.58
PCDH19-201ENST00000255531 ZFYP08048 801 aaPredicted RBP11.42□□□□□ -0.58
PCDH19-201ENST00000255531 DESP17661 470 aa11.42□□□□□ -0.58
PCDH19-201ENST00000255531 ERICH2A1L162 156 aa11.41□□□□□ -0.58
PCDH19-201ENST00000255531 PPFIBP1Q86W92 1011 aa11.41□□□□□ -0.58
PCDH19-201ENST00000255531 GOLGA6L9A6NEM1 432 aa11.41□□□□□ -0.58
PCDH19-201ENST00000255531 PHLDB1Q86UU1 1377 aa11.41□□□□□ -0.58
PCDH19-201ENST00000255531 RNF168Q8IYW5 571 aaPredicted RBP11.41□□□□□ -0.58
PCDH19-201ENST00000255531 NOL10Q9BSC4 688 aaKnown RBP11.41□□□□□ -0.58
PCDH19-201ENST00000255531 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.4□□□□□ -0.58
PCDH19-201ENST00000255531 ZMAT2Q96NC0 199 aaKnown RBP11.4□□□□□ -0.58
PCDH19-201ENST00000255531 FEZ2Q9UHY8 353 aaPredicted RBP11.4□□□□□ -0.58
PCDH19-201ENST00000255531 VPS37CA5D8V6 355 aaPredicted RBP11.4□□□□□ -0.58
PCDH19-201ENST00000255531 JAKMIP3Q5VZ66 844 aa11.4□□□□□ -0.58
PCDH19-201ENST00000255531 SEPT10Q9P0V9 454 aa11.4□□□□□ -0.58
PCDH19-201ENST00000255531 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.4□□□□□ -0.58
PCDH19-201ENST00000255531 KIF2AO00139 706 aaPredicted RBP11.4□□□□□ -0.58
PCDH19-201ENST00000255531 XBP1P17861 261 aa11.4□□□□□ -0.58
PCDH19-201ENST00000255531 UBXN4Q92575 508 aa11.4□□□□□ -0.58
PCDH19-201ENST00000255531 HSP90AB4PQ58FF6 505 aa11.4□□□□□ -0.58
PCDH19-201ENST00000255531 CCDC148Q8NFR7 591 aa11.4□□□□□ -0.58
PCDH19-201ENST00000255531 MIPOL1Q8TD10 442 aa11.4□□□□□ -0.58
PCDH19-201ENST00000255531 CENPJQ9HC77 1338 aaPredicted RBP11.4□□□□□ -0.59
PCDH19-201ENST00000255531 PDIA4P13667 645 aaKnown RBP11.39□□□□□ -0.59
PCDH19-201ENST00000255531 ANO2Q9NQ90 1003 aa11.39□□□□□ -0.59
PCDH19-201ENST00000255531 GTPBP4Q9BZE4 634 aaKnown RBP11.39□□□□□ -0.59
PCDH19-201ENST00000255531 SLC4A3P48751 1232 aa11.38□□□□□ -0.59
PCDH19-201ENST00000255531 NFKBIBQ15653 356 aa11.38□□□□□ -0.59
PCDH19-201ENST00000255531 DACH1Q9UI36 760 aa11.38□□□□□ -0.59
PCDH19-201ENST00000255531 TRAK2O60296 914 aa11.38□□□□□ -0.59
PCDH19-201ENST00000255531 SPC24Q8NBT2 197 aa11.38□□□□□ -0.59
PCDH19-201ENST00000255531 HSPA4P34932 840 aa11.38□□□□□ -0.59
PCDH19-201ENST00000255531 CBFA2T2O43439 604 aa11.37□□□□□ -0.59
PCDH19-201ENST00000255531 CCDC174Q6PII3 467 aa11.37□□□□□ -0.59
PCDH19-201ENST00000255531 LIG1P18858 919 aa11.37□□□□□ -0.59
PCDH19-201ENST00000255531 CBX1P83916 185 aa11.37□□□□□ -0.59
PCDH19-201ENST00000255531 ANKRD45Q5TZF3 282 aa11.37□□□□□ -0.59
PCDH19-201ENST00000255531 PRDM10Q9NQV6 1147 aa11.37□□□□□ -0.59
PCDH19-201ENST00000255531 IVLP07476 585 aa11.37□□□□□ -0.59
PCDH19-201ENST00000255531 STIM1Q13586 685 aa11.37□□□□□ -0.59
PCDH19-201ENST00000255531 NFXL1Q6ZNB6 911 aa11.37□□□□□ -0.59
PCDH19-201ENST00000255531 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
PCDH19-201ENST00000255531 PDE3BQ13370 1112 aa11.37□□□□□ -0.59
PCDH19-201ENST00000255531 RNF214Q8ND24 703 aa11.37□□□□□ -0.59
PCDH19-201ENST00000255531 SERPINC1P01008 464 aa11.36□□□□□ -0.59
PCDH19-201ENST00000255531 SLC4A10Q6U841 1118 aa11.36□□□□□ -0.59
PCDH19-201ENST00000255531 MPHOSPH10O00566 681 aaKnown RBP11.36□□□□□ -0.59
PCDH19-201ENST00000255531 BRPF1P55201 1214 aaPredicted RBP11.36□□□□□ -0.59
PCDH19-201ENST00000255531 CCDC113Q9H0I3 377 aa11.36□□□□□ -0.59
PCDH19-201ENST00000255531 CCDC192P0DO97 292 aa11.36□□□□□ -0.59
PCDH19-201ENST00000255531 SENP3Q9H4L4 574 aaPredicted RBP11.36□□□□□ -0.59
PCDH19-201ENST00000255531 CCDC158Q5M9N0 1113 aa11.36□□□□□ -0.59
PCDH19-201ENST00000255531 PUS7Q96PZ0 661 aaKnown RBP11.36□□□□□ -0.59
PCDH19-201ENST00000255531 GOLIM4O00461 696 aa11.35□□□□□ -0.59
PCDH19-201ENST00000255531 ZMYND15Q9H091 742 aa11.35□□□□□ -0.59
PCDH19-201ENST00000255531 ZNF330Q9Y3S2 320 aaPredicted RBP11.35□□□□□ -0.59
PCDH19-201ENST00000255531 RSF1Q96T23 1441 aaPredicted RBP11.35□□□□□ -0.59
PCDH19-201ENST00000255531 RRP7BPQ9NSQ0 103 aa11.35□□□□□ -0.59
PCDH19-201ENST00000255531 DHX16O60231 1041 aaKnown RBP11.35□□□□□ -0.59
PCDH19-201ENST00000255531 IFFO1Q0D2I5 559 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms