RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 USP35Q9P2H5 1018 aa11.58□□□□□ -0.56
PDE6A-201ENST00000255266 ITPRIPQ8IWB1 547 aa11.58□□□□□ -0.56
PDE6A-201ENST00000255266 ISY1Q9ULR0 285 aaKnown RBP11.58□□□□□ -0.56
PDE6A-201ENST00000255266 NPHP3Q7Z494 1330 aa11.58□□□□□ -0.56
PDE6A-201ENST00000255266 GNAI1P63096 354 aa11.58□□□□□ -0.56
PDE6A-201ENST00000255266 LRRFIP1Q32MZ4 808 aaKnown RBP11.58□□□□□ -0.56
PDE6A-201ENST00000255266 RUNDC1Q96C34 613 aa11.57□□□□□ -0.56
PDE6A-201ENST00000255266 CCDC146Q8IYE0 955 aa11.57□□□□□ -0.56
PDE6A-201ENST00000255266 CABP4P57796 275 aa11.56□□□□□ -0.56
PDE6A-201ENST00000255266 RBM33Q96EV2 1170 aaKnown RBP11.56□□□□□ -0.56
PDE6A-201ENST00000255266 SLC4A10Q6U841 1118 aa11.56□□□□□ -0.56
PDE6A-201ENST00000255266 KRT28Q7Z3Y7 464 aa11.56□□□□□ -0.56
PDE6A-201ENST00000255266 RWDD1Q9H446 243 aaPredicted RBP11.56□□□□□ -0.56
PDE6A-201ENST00000255266 NOS1P29475 1434 aa11.56□□□□□ -0.56
PDE6A-201ENST00000255266 TCOF1Q13428 1488 aaKnown RBP11.56□□□□□ -0.56
PDE6A-201ENST00000255266 AMOTL1Q8IY63 956 aa11.56□□□□□ -0.56
PDE6A-201ENST00000255266 KIAA1211Q6ZU35 1233 aa11.56□□□□□ -0.56
PDE6A-201ENST00000255266 DDRGK1Q96HY6 314 aa11.56□□□□□ -0.56
PDE6A-201ENST00000255266 E9PSI1 815 aa11.56□□□□□ -0.56
PDE6A-201ENST00000255266 TSPYL4Q9UJ04 414 aa11.56□□□□□ -0.56
PDE6A-201ENST00000255266 ABCA8O94911 1581 aa11.55□□□□□ -0.56
PDE6A-201ENST00000255266 WASLO00401 505 aaPredicted RBP11.55□□□□□ -0.56
PDE6A-201ENST00000255266 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
PDE6A-201ENST00000255266 KDM6BO15054 1643 aa11.54□□□□□ -0.56
PDE6A-201ENST00000255266 RIPK4P57078 832 aa11.54□□□□□ -0.56
PDE6A-201ENST00000255266 RBM42Q9BTD8 480 aaKnown RBP11.54□□□□□ -0.56
PDE6A-201ENST00000255266 TRIM34Q9BYJ4 488 aa11.54□□□□□ -0.56
PDE6A-201ENST00000255266 ZCCHC11Q5TAX3 1644 aaKnown RBP11.54□□□□□ -0.56
PDE6A-201ENST00000255266 EIF2S2P20042 333 aaKnown RBP11.54□□□□□ -0.56
PDE6A-201ENST00000255266 ADAMTS2O95450 1211 aa11.53□□□□□ -0.56
PDE6A-201ENST00000255266 CCDC7Q96M83 1385 aa11.53□□□□□ -0.56
PDE6A-201ENST00000255266 C19orf44Q9H6X5 657 aa11.53□□□□□ -0.56
PDE6A-201ENST00000255266 C14orf93Q9H972 538 aaKnown RBP11.52□□□□□ -0.56
PDE6A-201ENST00000255266 C9orf78Q9NZ63 289 aaPredicted RBP11.52□□□□□ -0.57
PDE6A-201ENST00000255266 API5Q9BZZ5 524 aaKnown RBP11.52□□□□□ -0.57
PDE6A-201ENST00000255266 ZRSR1Q15695 479 aaKnown RBP11.52□□□□□ -0.57
PDE6A-201ENST00000255266 DDX54Q8TDD1 881 aaKnown RBP11.51□□□□□ -0.57
PDE6A-201ENST00000255266 LRRC59Q96AG4 307 aaKnown RBP11.51□□□□□ -0.57
PDE6A-201ENST00000255266 VPS37DQ86XT2 251 aa11.51□□□□□ -0.57
PDE6A-201ENST00000255266 GOLGA6L22H0YM25 854 aa11.5□□□□□ -0.57
PDE6A-201ENST00000255266 HSPA2P54652 639 aa11.5□□□□□ -0.57
PDE6A-201ENST00000255266 XPCQ01831 940 aaPredicted RBP11.5□□□□□ -0.57
PDE6A-201ENST00000255266 RCAN3Q9UKA8 241 aa11.5□□□□□ -0.57
PDE6A-201ENST00000255266 SCAF11Q99590 1463 aaKnown RBP11.5□□□□□ -0.57
PDE6A-201ENST00000255266 RIC3Q7Z5B4 369 aa11.5□□□□□ -0.57
PDE6A-201ENST00000255266 NAP1L2Q9ULW6 460 aaPredicted RBP11.5□□□□□ -0.57
PDE6A-201ENST00000255266 ZNF530Q6P9A1 599 aaPredicted RBP11.5□□□□□ -0.57
PDE6A-201ENST00000255266 TTC21AQ8NDW8 1320 aa11.5□□□□□ -0.57
PDE6A-201ENST00000255266 TBX22Q9Y458 520 aa11.5□□□□□ -0.57
PDE6A-201ENST00000255266 SENP3-EIF4A1A0A087X0R7 540 aa11.49□□□□□ -0.57
PDE6A-201ENST00000255266 AMOTQ4VCS5 1084 aa11.49□□□□□ -0.57
PDE6A-201ENST00000255266 WAPLQ7Z5K2 1190 aa11.49□□□□□ -0.57
PDE6A-201ENST00000255266 TSPOAP1O95153 1857 aa11.49□□□□□ -0.57
PDE6A-201ENST00000255266 ZC3H6P61129 1189 aaKnown RBP11.49□□□□□ -0.57
PDE6A-201ENST00000255266 NBPF1Q3BBV0 1214 aa11.49□□□□□ -0.57
PDE6A-201ENST00000255266 MAST1Q9Y2H9 1570 aa11.49□□□□□ -0.57
PDE6A-201ENST00000255266 EIF2AK4Q9P2K8 1649 aaKnown RBP11.49□□□□□ -0.57
PDE6A-201ENST00000255266 MTHFSP49914 203 aa11.49□□□□□ -0.57
PDE6A-201ENST00000255266 EXOC5O00471 708 aa11.48□□□□□ -0.57
PDE6A-201ENST00000255266 HMOX1P09601 288 aa11.48□□□□□ -0.57
PDE6A-201ENST00000255266 KCNA6P17658 529 aa11.48□□□□□ -0.57
PDE6A-201ENST00000255266 CCDC30Q5VVM6 783 aa11.48□□□□□ -0.57
PDE6A-201ENST00000255266 DNMT1P26358 1616 aaKnown RBP11.48□□□□□ -0.57
PDE6A-201ENST00000255266 KIF7Q2M1P5 1343 aa11.48□□□□□ -0.57
PDE6A-201ENST00000255266 TRPM2O94759 1503 aa11.48□□□□□ -0.57
PDE6A-201ENST00000255266 PPP4R2Q9NY27 417 aa11.48□□□□□ -0.57
PDE6A-201ENST00000255266 RRP7AQ9Y3A4 280 aaKnown RBP11.48□□□□□ -0.57
PDE6A-201ENST00000255266 ARHGEF5Q12774 1597 aa11.48□□□□□ -0.57
PDE6A-201ENST00000255266 MAGI3Q5TCQ9 1506 aa11.47□□□□□ -0.57
PDE6A-201ENST00000255266 NSD2O96028 1365 aa11.47□□□□□ -0.57
PDE6A-201ENST00000255266 FOXO3O43524 673 aa11.47□□□□□ -0.57
PDE6A-201ENST00000255266 HSP90AB4PQ58FF6 505 aa11.47□□□□□ -0.57
PDE6A-201ENST00000255266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.47□□□□□ -0.57
PDE6A-201ENST00000255266 IRX6P78412 446 aaPredicted RBP11.47□□□□□ -0.57
PDE6A-201ENST00000255266 PPP1R1BQ9UD71 204 aaPredicted RBP11.47□□□□□ -0.57
PDE6A-201ENST00000255266 ZNF652Q9Y2D9 606 aa11.47□□□□□ -0.57
PDE6A-201ENST00000255266 TMOD3Q9NYL9 352 aa11.46□□□□□ -0.57
PDE6A-201ENST00000255266 STARD3NLO95772 234 aa11.46□□□□□ -0.57
PDE6A-201ENST00000255266 ZKSCAN2Q63HK3 967 aa11.46□□□□□ -0.57
PDE6A-201ENST00000255266 FBXW7Q969H0 707 aa11.46□□□□□ -0.57
PDE6A-201ENST00000255266 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.57
PDE6A-201ENST00000255266 CTDP1Q9Y5B0 961 aaPredicted RBP11.46□□□□□ -0.57
PDE6A-201ENST00000255266 SUPT16HQ9Y5B9 1047 aaKnown RBP11.46□□□□□ -0.57
PDE6A-201ENST00000255266 ADGRF5Q8IZF2 1346 aa11.46□□□□□ -0.57
PDE6A-201ENST00000255266 SLC12A5Q9H2X9 1139 aa11.46□□□□□ -0.58
PDE6A-201ENST00000255266 HECW2Q9P2P5 1572 aa11.46□□□□□ -0.58
PDE6A-201ENST00000255266 BRD4O60885 1362 aaPredicted RBP11.45□□□□□ -0.58
PDE6A-201ENST00000255266 RPRD2Q5VT52 1461 aaKnown RBP11.45□□□□□ -0.58
PDE6A-201ENST00000255266 PRKRIP1Q9H875 184 aaPredicted RBP11.45□□□□□ -0.58
PDE6A-201ENST00000255266 FKBP5Q13451 457 aaPredicted RBP11.44□□□□□ -0.58
PDE6A-201ENST00000255266 TTC21BQ7Z4L5 1316 aa11.44□□□□□ -0.58
PDE6A-201ENST00000255266 KIF16BQ96L93 1317 aa11.44□□□□□ -0.58
PDE6A-201ENST00000255266 KDM5DQ9BY66 1539 aa11.44□□□□□ -0.58
PDE6A-201ENST00000255266 RIMBP3CA6NJZ7 1639 aa11.44□□□□□ -0.58
PDE6A-201ENST00000255266 RIMBP3BA6NNM3 1639 aa11.44□□□□□ -0.58
PDE6A-201ENST00000255266 RIMBP3Q9UFD9 1639 aa11.44□□□□□ -0.58
PDE6A-201ENST00000255266 C11orf95C9JLR9 678 aaPredicted RBP11.44□□□□□ -0.58
PDE6A-201ENST00000255266 ADGBQ8N7X0 1667 aa11.44□□□□□ -0.58
PDE6A-201ENST00000255266 APBB1O00213 710 aa11.44□□□□□ -0.58
PDE6A-201ENST00000255266 NSD3Q9BZ95 1437 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms