RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 GZF1Q9H116 711 aaPredicted RBP25.89■■□□□ 1.74
RARA-201ENST00000254066 PTMSP20962 102 aa25.88■■□□□ 1.73
RARA-201ENST00000254066 SYNMO15061 1565 aa25.88■■□□□ 1.73
RARA-201ENST00000254066 AMER1Q5JTC6 1135 aaPredicted RBP25.88■■□□□ 1.73
RARA-201ENST00000254066 MYO5CQ9NQX4 1742 aa25.88■■□□□ 1.73
RARA-201ENST00000254066 TERF1P54274 439 aa25.87■■□□□ 1.73
RARA-201ENST00000254066 RNF17Q9BXT8 1623 aaKnown RBP25.87■■□□□ 1.73
RARA-201ENST00000254066 ASXL1Q8IXJ9 1541 aa25.87■■□□□ 1.73
RARA-201ENST00000254066 ZNF777Q9ULD5 760 aaPredicted RBP25.87■■□□□ 1.73
RARA-201ENST00000254066 RICTORQ6R327 1708 aa25.87■■□□□ 1.73
RARA-201ENST00000254066 CALD1Q05682 793 aaKnown RBP25.86■■□□□ 1.73
RARA-201ENST00000254066 ERBB4Q15303 1308 aa25.86■■□□□ 1.73
RARA-201ENST00000254066 ARHGEF5Q12774 1597 aa25.85■■□□□ 1.73
RARA-201ENST00000254066 EFCAB2Q5VUJ9 269 aa25.85■■□□□ 1.73
RARA-201ENST00000254066 SPINK5Q9NQ38 1064 aaPredicted RBP25.85■■□□□ 1.73
RARA-201ENST00000254066 TSPY4P0CV99 314 aa25.84■■□□□ 1.73
RARA-201ENST00000254066 TSPY10P0CW01 314 aa25.84■■□□□ 1.73
RARA-201ENST00000254066 SKOR2Q2VWA4 1001 aaPredicted RBP25.83■■□□□ 1.73
RARA-201ENST00000254066 CDCA8Q53HL2 280 aa25.83■■□□□ 1.73
RARA-201ENST00000254066 NCOA3Q9Y6Q9 1424 aa25.82■■□□□ 1.72
RARA-201ENST00000254066 RTEL1-TNFRSF6BF6WH68 1400 aa25.82■■□□□ 1.72
RARA-201ENST00000254066 ARHGEF40Q8TER5 1519 aa25.81■■□□□ 1.72
RARA-201ENST00000254066 COG6Q9Y2V7 657 aa25.81■■□□□ 1.72
RARA-201ENST00000254066 APAF1O14727 1248 aa25.8■■□□□ 1.72
RARA-201ENST00000254066 CANXP27824 592 aaKnown RBP25.8■■□□□ 1.72
RARA-201ENST00000254066 MAP7D2Q96T17 732 aa25.8■■□□□ 1.72
RARA-201ENST00000254066 RWDD1Q9H446 243 aaPredicted RBP25.79■■□□□ 1.72
RARA-201ENST00000254066 CIZ1Q9ULV3 898 aaPredicted RBP25.79■■□□□ 1.72
RARA-201ENST00000254066 PDZRN3Q9UPQ7 1066 aa25.79■■□□□ 1.72
RARA-201ENST00000254066 ZNF692Q9BU19 519 aaPredicted RBP25.79■■□□□ 1.72
RARA-201ENST00000254066 C22orf23Q9BZE7 217 aa25.79■■□□□ 1.72
RARA-201ENST00000254066 DDIT3P35638 169 aa25.78■■□□□ 1.72
RARA-201ENST00000254066 POGZQ7Z3K3 1410 aa25.77■■□□□ 1.72
RARA-201ENST00000254066 PANK1Q8TE04 598 aa25.77■■□□□ 1.72
RARA-201ENST00000254066 CCDC173Q0VFZ6 552 aa25.76■■□□□ 1.71
RARA-201ENST00000254066 PLA2R1Q13018 1463 aa25.76■■□□□ 1.71
RARA-201ENST00000254066 HSCBQ8IWL3 235 aa25.76■■□□□ 1.71
RARA-201ENST00000254066 ARHGAP5Q13017 1502 aa25.76■■□□□ 1.71
RARA-201ENST00000254066 PPP1R9BQ96SB3 815 aa25.75■■□□□ 1.71
RARA-201ENST00000254066 ATP10AO60312 1499 aa25.75■■□□□ 1.71
RARA-201ENST00000254066 UNC13BO14795 1591 aa25.75■■□□□ 1.71
RARA-201ENST00000254066 ZFYVE16Q7Z3T8 1539 aa25.74■■□□□ 1.71
RARA-201ENST00000254066 GBP4Q96PP9 640 aa25.74■■□□□ 1.71
RARA-201ENST00000254066 IQGAP1P46940 1657 aa25.73■■□□□ 1.71
RARA-201ENST00000254066 OFD1O75665 1012 aa25.73■■□□□ 1.71
RARA-201ENST00000254066 KIAA1211Q6ZU35 1233 aa25.73■■□□□ 1.71
RARA-201ENST00000254066 CCDC146Q8IYE0 955 aa25.73■■□□□ 1.71
RARA-201ENST00000254066 SNX21Q969T3 373 aa25.73■■□□□ 1.71
RARA-201ENST00000254066 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.72■■□□□ 1.71
RARA-201ENST00000254066 PCDHB15Q9Y5E8 787 aa25.72■■□□□ 1.71
RARA-201ENST00000254066 ZSCAN30Q86W11 494 aa25.72■■□□□ 1.71
RARA-201ENST00000254066 ADAMTSL3P82987 1691 aa25.71■■□□□ 1.71
RARA-201ENST00000254066 RGL3Q3MIN7 710 aa25.71■■□□□ 1.71
RARA-201ENST00000254066 PREX2Q70Z35 1606 aa25.71■■□□□ 1.71
RARA-201ENST00000254066 SPRYD3Q8NCJ5 442 aa25.71■■□□□ 1.71
RARA-201ENST00000254066 IBTKQ9P2D0 1353 aaPredicted RBP25.7■■□□□ 1.7
RARA-201ENST00000254066 ZNF518AQ6AHZ1 1483 aa25.7■■□□□ 1.7
RARA-201ENST00000254066 SMC5Q8IY18 1101 aa25.69■■□□□ 1.7
RARA-201ENST00000254066 CDC42BPBQ9Y5S2 1711 aa25.68■■□□□ 1.7
RARA-201ENST00000254066 RARSP54136 660 aaKnown RBP25.68■■□□□ 1.7
RARA-201ENST00000254066 RSPH4AQ5TD94 716 aa25.67■■□□□ 1.7
RARA-201ENST00000254066 GAS2L3Q86XJ1 694 aa25.67■■□□□ 1.7
RARA-201ENST00000254066 WWC1Q8IX03 1113 aa25.67■■□□□ 1.7
RARA-201ENST00000254066 HS1BP3Q53T59 392 aa25.66■■□□□ 1.7
RARA-201ENST00000254066 MYOM1P52179 1685 aa25.66■■□□□ 1.7
RARA-201ENST00000254066 ANP32BQ92688 251 aaKnown RBP25.65■■□□□ 1.7
RARA-201ENST00000254066 PRDM4Q9UKN5 801 aa25.65■■□□□ 1.7
RARA-201ENST00000254066 IQGAP3Q86VI3 1631 aa25.65■■□□□ 1.7
RARA-201ENST00000254066 RBM25P49756 843 aaKnown RBP25.64■■□□□ 1.7
RARA-201ENST00000254066 RAB3GAP1Q15042 981 aa25.64■■□□□ 1.7
RARA-201ENST00000254066 MTERF4Q7Z6M4 381 aaKnown RBP25.64■■□□□ 1.7
RARA-201ENST00000254066 DMRT2Q9Y5R5 561 aa25.64■■□□□ 1.7
RARA-201ENST00000254066 YEATS2Q9ULM3 1422 aa25.64■■□□□ 1.69
RARA-201ENST00000254066 TNPO1Q92973 898 aaKnown RBP25.64■■□□□ 1.69
RARA-201ENST00000254066 MFAP1P55081 439 aaKnown RBP25.62■■□□□ 1.69
RARA-201ENST00000254066 STAC3Q96MF2 364 aa25.62■■□□□ 1.69
RARA-201ENST00000254066 POLR3AO14802 1390 aaPredicted RBP25.61■■□□□ 1.69
RARA-201ENST00000254066 KANK1Q14678 1352 aa25.61■■□□□ 1.69
RARA-201ENST00000254066 ABCC1P33527 1531 aa25.61■■□□□ 1.69
RARA-201ENST00000254066 PTPRMP28827 1452 aa25.61■■□□□ 1.69
RARA-201ENST00000254066 MSNP26038 577 aaKnown RBP25.61■■□□□ 1.69
RARA-201ENST00000254066 SCAF11Q99590 1463 aaKnown RBP25.6■■□□□ 1.69
RARA-201ENST00000254066 MAST1Q9Y2H9 1570 aa25.6■■□□□ 1.69
RARA-201ENST00000254066 CLEC17AQ6ZS10 378 aa25.59■■□□□ 1.69
RARA-201ENST00000254066 WDR63Q8IWG1 891 aa25.59■■□□□ 1.69
RARA-201ENST00000254066 MADDQ8WXG6 1647 aa25.59■■□□□ 1.69
RARA-201ENST00000254066 NASPP49321 788 aaPredicted RBP25.58■■□□□ 1.69
RARA-201ENST00000254066 RLBP1P12271 317 aa25.57■■□□□ 1.68
RARA-201ENST00000254066 RIPK4P57078 832 aa25.57■■□□□ 1.68
RARA-201ENST00000254066 ARHGAP31Q2M1Z3 1444 aa25.57■■□□□ 1.68
RARA-201ENST00000254066 MLH3Q9UHC1 1453 aa25.57■■□□□ 1.68
RARA-201ENST00000254066 PHF23Q9BUL5 403 aaPredicted RBP25.57■■□□□ 1.68
RARA-201ENST00000254066 HECW2Q9P2P5 1572 aa25.57■■□□□ 1.68
RARA-201ENST00000254066 KDM5AP29375 1690 aaKnown RBP25.57■■□□□ 1.68
RARA-201ENST00000254066 HDAC1Q13547 482 aaPredicted RBP25.56■■□□□ 1.68
RARA-201ENST00000254066 MVPQ14764 893 aaKnown RBP25.56■■□□□ 1.68
RARA-201ENST00000254066 SMAP1Q8IYB5 467 aaPredicted RBP25.55■■□□□ 1.68
RARA-201ENST00000254066 GOLGA6L22H0YM25 854 aa25.54■■□□□ 1.68
RARA-201ENST00000254066 AFAP1Q8N556 730 aa25.54■■□□□ 1.68
RARA-201ENST00000254066 ZNF500O60304 480 aaPredicted RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms