RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CCDC146Q8IYE0 955 aa24.63■■□□□ 1.53
SNX4-201ENST00000251775 RPGRIP1LQ68CZ1 1315 aa24.62■■□□□ 1.53
SNX4-201ENST00000251775 CENPQQ7L2Z9 268 aaPredicted RBP24.62■■□□□ 1.53
SNX4-201ENST00000251775 PIK3C2BO00750 1634 aa24.61■■□□□ 1.53
SNX4-201ENST00000251775 GOLGA2Q08379 1002 aa24.61■■□□□ 1.53
SNX4-201ENST00000251775 C8orf34Q49A92 452 aa24.6■■□□□ 1.53
SNX4-201ENST00000251775 RICTORQ6R327 1708 aa24.6■■□□□ 1.53
SNX4-201ENST00000251775 FAM161AQ3B820 660 aa24.59■■□□□ 1.53
SNX4-201ENST00000251775 DAXXQ9UER7 740 aaPredicted RBP24.59■■□□□ 1.53
SNX4-201ENST00000251775 NUTM2DQ5VT03 806 aaPredicted RBP24.57■■□□□ 1.52
SNX4-201ENST00000251775 SLC12A5Q9H2X9 1139 aa24.57■■□□□ 1.52
SNX4-201ENST00000251775 APAF1O14727 1248 aa24.56■■□□□ 1.52
SNX4-201ENST00000251775 SLFN5Q08AF3 891 aa24.56■■□□□ 1.52
SNX4-201ENST00000251775 NSD3Q9BZ95 1437 aa24.56■■□□□ 1.52
SNX4-201ENST00000251775 NEXMIFQ5QGS0 1516 aa24.56■■□□□ 1.52
SNX4-201ENST00000251775 GLI2P10070 1586 aa24.55■■□□□ 1.52
SNX4-201ENST00000251775 TRMT2AQ8IZ69 625 aaKnown RBP24.53■■□□□ 1.52
SNX4-201ENST00000251775 SPINK5Q9NQ38 1064 aaPredicted RBP24.53■■□□□ 1.52
SNX4-201ENST00000251775 ARHGEF28Q8N1W1 1705 aaKnown RBP24.52■■□□□ 1.52
SNX4-201ENST00000251775 YEATS2Q9ULM3 1422 aa24.52■■□□□ 1.52
SNX4-201ENST00000251775 POLR3AO14802 1390 aaPredicted RBP24.52■■□□□ 1.52
SNX4-201ENST00000251775 ARHGAP31Q2M1Z3 1444 aa24.51■■□□□ 1.51
SNX4-201ENST00000251775 VGFO15240 615 aaPredicted RBP24.5■■□□□ 1.51
SNX4-201ENST00000251775 FRAT2O75474 233 aaPredicted RBP24.5■■□□□ 1.51
SNX4-201ENST00000251775 IDI1Q13907 227 aa24.5■■□□□ 1.51
SNX4-201ENST00000251775 SHPRHQ149N8 1683 aa24.49■■□□□ 1.51
SNX4-201ENST00000251775 MORC1Q86VD1 984 aa24.49■■□□□ 1.51
SNX4-201ENST00000251775 MYO5BQ9ULV0 1848 aa24.48■■□□□ 1.51
SNX4-201ENST00000251775 TULP4Q9NRJ4 1543 aa24.47■■□□□ 1.51
SNX4-201ENST00000251775 USP32Q8NFA0 1604 aa24.46■■□□□ 1.51
SNX4-201ENST00000251775 TNNT2P45379 298 aaPredicted RBP24.46■■□□□ 1.51
SNX4-201ENST00000251775 DMRT2Q9Y5R5 561 aa24.46■■□□□ 1.51
SNX4-201ENST00000251775 NKTRP30414 1462 aaKnown RBP24.44■■□□□ 1.5
SNX4-201ENST00000251775 RGS3P49796 1198 aa24.44■■□□□ 1.5
SNX4-201ENST00000251775 EVC2Q86UK5 1308 aa24.43■■□□□ 1.5
SNX4-201ENST00000251775 PREX1Q8TCU6 1659 aa24.43■■□□□ 1.5
SNX4-201ENST00000251775 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.42■■□□□ 1.5
SNX4-201ENST00000251775 E9PSI1 815 aa24.42■■□□□ 1.5
SNX4-201ENST00000251775 NGEFQ8N5V2 710 aa24.41■■□□□ 1.5
SNX4-201ENST00000251775 PUS7Q96PZ0 661 aaKnown RBP24.41■■□□□ 1.5
SNX4-201ENST00000251775 SLC52A1Q9NWF4 448 aa24.41■■□□□ 1.5
SNX4-201ENST00000251775 ZFYVE9O95405 1425 aa24.41■■□□□ 1.5
SNX4-201ENST00000251775 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
SNX4-201ENST00000251775 TMEM131LA2VDJ0 1609 aa24.4■■□□□ 1.5
SNX4-201ENST00000251775 CGNL1Q0VF96 1302 aa24.4■■□□□ 1.5
SNX4-201ENST00000251775 CABP2Q9NPB3 220 aa24.38■■□□□ 1.49
SNX4-201ENST00000251775 ANKRD36BQ8N2N9 1353 aa24.38■■□□□ 1.49
SNX4-201ENST00000251775 SAFB2Q14151 953 aaKnown RBP eCLIP24.38■■□□□ 1.49
SNX4-201ENST00000251775 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
SNX4-201ENST00000251775 WWC1Q8IX03 1113 aa24.38■■□□□ 1.49
SNX4-201ENST00000251775 BCAR3O75815 825 aa24.37■■□□□ 1.49
SNX4-201ENST00000251775 MTHFSP49914 203 aa24.37■■□□□ 1.49
SNX4-201ENST00000251775 VIRMAQ69YN4 1812 aaKnown RBP24.36■■□□□ 1.49
SNX4-201ENST00000251775 STK26Q9P289 416 aa24.36■■□□□ 1.49
SNX4-201ENST00000251775 FAM43AQ8N2R8 423 aa24.34■■□□□ 1.49
SNX4-201ENST00000251775 USP19O94966 1318 aa24.34■■□□□ 1.49
SNX4-201ENST00000251775 RUNDC1Q96C34 613 aa24.34■■□□□ 1.49
SNX4-201ENST00000251775 UBE2Q2Q8WVN8 375 aa24.33■■□□□ 1.49
SNX4-201ENST00000251775 IQSEC2Q5JU85 1478 aa24.33■■□□□ 1.49
SNX4-201ENST00000251775 FBXO31Q5XUX0 539 aaPredicted RBP24.33■■□□□ 1.49
SNX4-201ENST00000251775 RRP7AQ9Y3A4 280 aaKnown RBP24.32■■□□□ 1.48
SNX4-201ENST00000251775 NEUROD2Q15784 382 aa24.31■■□□□ 1.48
SNX4-201ENST00000251775 TCP11L2Q8N4U5 519 aa24.31■■□□□ 1.48
SNX4-201ENST00000251775 PTPRMP28827 1452 aa24.31■■□□□ 1.48
SNX4-201ENST00000251775 NSD2O96028 1365 aa24.31■■□□□ 1.48
SNX4-201ENST00000251775 EIF5BO60841 1220 aaKnown RBP24.3■■□□□ 1.48
SNX4-201ENST00000251775 CFAP53Q96M91 514 aa24.29■■□□□ 1.48
SNX4-201ENST00000251775 FAM69CQ0P6D2 419 aa24.28■■□□□ 1.48
SNX4-201ENST00000251775 A0A1W2PP64 1363 aa24.28■■□□□ 1.48
SNX4-201ENST00000251775 IGHDP01880 384 aa24.28■■□□□ 1.48
SNX4-201ENST00000251775 PHF23Q9BUL5 403 aaPredicted RBP24.28■■□□□ 1.48
SNX4-201ENST00000251775 TSPOAP1O95153 1857 aa24.28■■□□□ 1.48
SNX4-201ENST00000251775 SRPK2P78362 688 aaKnown RBP24.27■■□□□ 1.48
SNX4-201ENST00000251775 DIP2BQ9P265 1576 aa24.26■■□□□ 1.47
SNX4-201ENST00000251775 YTHDC2Q9H6S0 1430 aaKnown RBP24.26■■□□□ 1.47
SNX4-201ENST00000251775 MINK1Q8N4C8 1332 aaPredicted RBP24.26■■□□□ 1.47
SNX4-201ENST00000251775 PRAM1Q96QH2 718 aa24.25■■□□□ 1.47
SNX4-201ENST00000251775 RSPH6AQ9H0K4 717 aa24.25■■□□□ 1.47
SNX4-201ENST00000251775 POGKQ9P215 609 aa24.25■■□□□ 1.47
SNX4-201ENST00000251775 ABCC11Q96J66 1382 aa24.25■■□□□ 1.47
SNX4-201ENST00000251775 NINLQ9Y2I6 1382 aa24.24■■□□□ 1.47
SNX4-201ENST00000251775 SEC24BO95487 1268 aa24.24■■□□□ 1.47
SNX4-201ENST00000251775 CLTCQ00610 1675 aaKnown RBP24.23■■□□□ 1.47
SNX4-201ENST00000251775 ALKQ9UM73 1620 aa24.23■■□□□ 1.47
SNX4-201ENST00000251775 RIMBP3CA6NJZ7 1639 aa24.23■■□□□ 1.47
SNX4-201ENST00000251775 RIMBP3BA6NNM3 1639 aa24.23■■□□□ 1.47
SNX4-201ENST00000251775 RIMBP3Q9UFD9 1639 aa24.23■■□□□ 1.47
SNX4-201ENST00000251775 WDR63Q8IWG1 891 aa24.22■■□□□ 1.47
SNX4-201ENST00000251775 U2AF1L5P0DN76 240 aaPredicted RBP24.21■■□□□ 1.47
SNX4-201ENST00000251775 U2AF1Q01081 240 aaKnown RBP eCLIP24.21■■□□□ 1.47
SNX4-201ENST00000251775 NLRP1Q9C000 1473 aa24.21■■□□□ 1.47
SNX4-201ENST00000251775 GGNBP2Q9H3C7 697 aa24.21■■□□□ 1.47
SNX4-201ENST00000251775 CD163L1Q9NR16 1453 aa24.2■■□□□ 1.47
SNX4-201ENST00000251775 ATAD2Q6PL18 1390 aa24.2■■□□□ 1.46
SNX4-201ENST00000251775 PDE3AQ14432 1141 aa24.2■■□□□ 1.46
SNX4-201ENST00000251775 CCDC27Q2M243 656 aa24.2■■□□□ 1.46
SNX4-201ENST00000251775 ANKRD26Q9UPS8 1709 aa24.19■■□□□ 1.46
SNX4-201ENST00000251775 MAPK8IP3Q9UPT6 1336 aa24.18■■□□□ 1.46
SNX4-201ENST00000251775 ADGRB2O60241 1585 aa24.18■■□□□ 1.46
SNX4-201ENST00000251775 REREQ9P2R6 1566 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms