RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 CLTCQ00610 1675 aaKnown RBP19.57■□□□□ 0.72
MBD4-201ENST00000249910 ZMYM3Q14202 1370 aa19.57■□□□□ 0.72
MBD4-201ENST00000249910 RCAN3Q9UKA8 241 aa19.57■□□□□ 0.72
MBD4-201ENST00000249910 PDE3BQ13370 1112 aa19.56■□□□□ 0.72
MBD4-201ENST00000249910 WAPLQ7Z5K2 1190 aa19.55■□□□□ 0.72
MBD4-201ENST00000249910 PLPPR3Q6T4P5 718 aa19.54■□□□□ 0.72
MBD4-201ENST00000249910 PLEKHH1Q9ULM0 1364 aa19.54■□□□□ 0.72
MBD4-201ENST00000249910 TULP4Q9NRJ4 1543 aa19.54■□□□□ 0.72
MBD4-201ENST00000249910 YTHDC2Q9H6S0 1430 aaKnown RBP19.54■□□□□ 0.72
MBD4-201ENST00000249910 REREQ9P2R6 1566 aa19.53■□□□□ 0.72
MBD4-201ENST00000249910 APAF1O14727 1248 aa19.53■□□□□ 0.72
MBD4-201ENST00000249910 A2ML1A8K2U0 1454 aa19.53■□□□□ 0.72
MBD4-201ENST00000249910 ARHGEF28Q8N1W1 1705 aaKnown RBP19.52■□□□□ 0.72
MBD4-201ENST00000249910 CGNL1Q0VF96 1302 aa19.51■□□□□ 0.71
MBD4-201ENST00000249910 PLIN1O60240 522 aa19.51■□□□□ 0.71
MBD4-201ENST00000249910 CEBPAP49715 358 aaPredicted RBP19.5■□□□□ 0.71
MBD4-201ENST00000249910 RRP1P56182 461 aaKnown RBP19.5■□□□□ 0.71
MBD4-201ENST00000249910 ARHGEF40Q8TER5 1519 aa19.5■□□□□ 0.71
MBD4-201ENST00000249910 RIMS2Q9UQ26 1411 aa19.5■□□□□ 0.71
MBD4-201ENST00000249910 PTPRMP28827 1452 aa19.5■□□□□ 0.71
MBD4-201ENST00000249910 INSRP06213 1382 aa19.49■□□□□ 0.71
MBD4-201ENST00000249910 MTHFSP49914 203 aa19.49■□□□□ 0.71
MBD4-201ENST00000249910 ALKQ9UM73 1620 aa19.49■□□□□ 0.71
MBD4-201ENST00000249910 CDK19Q9BWU1 502 aa19.48■□□□□ 0.71
MBD4-201ENST00000249910 ANKRD36BQ8N2N9 1353 aa19.48■□□□□ 0.71
MBD4-201ENST00000249910 GGNBP2Q9H3C7 697 aa19.48■□□□□ 0.71
MBD4-201ENST00000249910 SPATA31D1Q6ZQQ2 1576 aa19.47■□□□□ 0.71
MBD4-201ENST00000249910 A0A1W2PP64 1363 aa19.47■□□□□ 0.71
MBD4-201ENST00000249910 CCDC136Q96JN2 1154 aa19.47■□□□□ 0.71
MBD4-201ENST00000249910 PUS7Q96PZ0 661 aaKnown RBP19.47■□□□□ 0.71
MBD4-201ENST00000249910 SPINK5Q9NQ38 1064 aaPredicted RBP19.46■□□□□ 0.71
MBD4-201ENST00000249910 CABP1Q9NZU7 370 aa19.46■□□□□ 0.71
MBD4-201ENST00000249910 RBM19Q9Y4C8 960 aaKnown RBP19.46■□□□□ 0.71
MBD4-201ENST00000249910 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
MBD4-201ENST00000249910 TXNDC2Q86VQ3 553 aa19.45■□□□□ 0.7
MBD4-201ENST00000249910 EXOC6Q8TAG9 804 aa19.45■□□□□ 0.7
MBD4-201ENST00000249910 TRHP20396 242 aaPredicted RBP19.45■□□□□ 0.7
MBD4-201ENST00000249910 GOLGA2Q08379 1002 aa19.45■□□□□ 0.7
MBD4-201ENST00000249910 DUSP27Q5VZP5 1158 aa19.45■□□□□ 0.7
MBD4-201ENST00000249910 ZNF521Q96K83 1311 aa19.45■□□□□ 0.7
MBD4-201ENST00000249910 METP08581 1390 aa19.44■□□□□ 0.7
MBD4-201ENST00000249910 DMRT2Q9Y5R5 561 aa19.44■□□□□ 0.7
MBD4-201ENST00000249910 POLR3AO14802 1390 aaPredicted RBP19.43■□□□□ 0.7
MBD4-201ENST00000249910 RRP7AQ9Y3A4 280 aaKnown RBP19.42■□□□□ 0.7
MBD4-201ENST00000249910 TNRQ92752 1358 aa19.41■□□□□ 0.7
MBD4-201ENST00000249910 FYB1O15117 783 aa19.41■□□□□ 0.7
MBD4-201ENST00000249910 TERF2IPQ9NYB0 399 aa19.4■□□□□ 0.7
MBD4-201ENST00000249910 ATAD2Q6PL18 1390 aa19.39■□□□□ 0.7
MBD4-201ENST00000249910 FBLN1P23142 703 aa19.39■□□□□ 0.69
MBD4-201ENST00000249910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.39■□□□□ 0.69
MBD4-201ENST00000249910 SLFN5Q08AF3 891 aa19.39■□□□□ 0.69
MBD4-201ENST00000249910 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.39■□□□□ 0.69
MBD4-201ENST00000249910 NCKAP5LQ9HCH0 1330 aa19.38■□□□□ 0.69
MBD4-201ENST00000249910 C20orf194Q5TEA3 1177 aa19.38■□□□□ 0.69
MBD4-201ENST00000249910 LTKP29376 864 aa19.37■□□□□ 0.69
MBD4-201ENST00000249910 ABCC11Q96J66 1382 aa19.37■□□□□ 0.69
MBD4-201ENST00000249910 CD163L1Q9NR16 1453 aa19.36■□□□□ 0.69
MBD4-201ENST00000249910 U2AF1L5P0DN76 240 aaPredicted RBP19.35■□□□□ 0.69
MBD4-201ENST00000249910 U2AF1Q01081 240 aaKnown RBP eCLIP19.35■□□□□ 0.69
MBD4-201ENST00000249910 HDGFL2Q7Z4V5 671 aaPredicted RBP19.35■□□□□ 0.69
MBD4-201ENST00000249910 TCP11L2Q8N4U5 519 aa19.35■□□□□ 0.69
MBD4-201ENST00000249910 CFAP53Q96M91 514 aa19.35■□□□□ 0.69
MBD4-201ENST00000249910 WWC1Q8IX03 1113 aa19.34■□□□□ 0.69
MBD4-201ENST00000249910 TMEM2Q9UHN6 1383 aa19.34■□□□□ 0.69
MBD4-201ENST00000249910 HDGFP51858 240 aaKnown RBP19.34■□□□□ 0.69
MBD4-201ENST00000249910 SLC26A8Q96RN1 970 aa19.34■□□□□ 0.69
MBD4-201ENST00000249910 NINLQ9Y2I6 1382 aa19.33■□□□□ 0.69
MBD4-201ENST00000249910 NUTM2FA1L443 756 aa19.32■□□□□ 0.68
MBD4-201ENST00000249910 WASLO00401 505 aaPredicted RBP19.32■□□□□ 0.68
MBD4-201ENST00000249910 U2SURPO15042 1029 aaKnown RBP19.32■□□□□ 0.68
MBD4-201ENST00000249910 RUNDC1Q96C34 613 aa19.32■□□□□ 0.68
MBD4-201ENST00000249910 CRBNQ96SW2 442 aa19.32■□□□□ 0.68
MBD4-201ENST00000249910 NSD2O96028 1365 aa19.32■□□□□ 0.68
MBD4-201ENST00000249910 TRMT2AQ8IZ69 625 aaKnown RBP19.31■□□□□ 0.68
MBD4-201ENST00000249910 PPM1GO15355 546 aaPredicted RBP19.31■□□□□ 0.68
MBD4-201ENST00000249910 NRXN3Q9Y4C0 1643 aa19.3■□□□□ 0.68
MBD4-201ENST00000249910 E9PSI1 815 aa19.29■□□□□ 0.68
MBD4-201ENST00000249910 BCAR3O75815 825 aa19.29■□□□□ 0.68
MBD4-201ENST00000249910 NUDT16Q96DE0 195 aaKnown RBP19.28■□□□□ 0.68
MBD4-201ENST00000249910 ZRANB1Q9UGI0 708 aa19.28■□□□□ 0.68
MBD4-201ENST00000249910 USP32Q8NFA0 1604 aa19.28■□□□□ 0.68
MBD4-201ENST00000249910 NLRP1Q9C000 1473 aa19.27■□□□□ 0.68
MBD4-201ENST00000249910 SETD1AO15047 1707 aaKnown RBP19.27■□□□□ 0.67
MBD4-201ENST00000249910 SHPRHQ149N8 1683 aa19.27■□□□□ 0.67
MBD4-201ENST00000249910 ROBO2Q9HCK4 1378 aa19.26■□□□□ 0.67
MBD4-201ENST00000249910 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
MBD4-201ENST00000249910 NME9Q86XW9 330 aa19.25■□□□□ 0.67
MBD4-201ENST00000249910 CCDC61Q9Y6R9 512 aa19.24■□□□□ 0.67
MBD4-201ENST00000249910 PPIP5K1Q6PFW1 1433 aa19.24■□□□□ 0.67
MBD4-201ENST00000249910 ADAMTS13Q76LX8 1427 aa19.23■□□□□ 0.67
MBD4-201ENST00000249910 SKAP1Q86WV1 359 aa19.23■□□□□ 0.67
MBD4-201ENST00000249910 NKTRP30414 1462 aaKnown RBP19.23■□□□□ 0.67
MBD4-201ENST00000249910 EID1Q9Y6B2 187 aa19.22■□□□□ 0.67
MBD4-201ENST00000249910 PRR36Q9H6K5 1346 aa19.22■□□□□ 0.67
MBD4-201ENST00000249910 NGEFQ8N5V2 710 aa19.22■□□□□ 0.67
MBD4-201ENST00000249910 POLKQ9UBT6 870 aa19.22■□□□□ 0.67
MBD4-201ENST00000249910 UBR1Q8IWV7 1749 aa19.21■□□□□ 0.67
MBD4-201ENST00000249910 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
MBD4-201ENST00000249910 DIAPH1O60610 1272 aaKnown RBP19.2■□□□□ 0.66
MBD4-201ENST00000249910 EMILIN1Q9Y6C2 1016 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms