RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 SOS2Q07890 1332 aaPredicted RBP19.17■□□□□ 0.66
APOBEC3A-201ENST00000249116 C8orf37Q96NL8 207 aa19.17■□□□□ 0.66
APOBEC3A-201ENST00000249116 LAMC1P11047 1609 aa19.16■□□□□ 0.66
APOBEC3A-201ENST00000249116 STK26Q9P289 416 aa19.15■□□□□ 0.66
APOBEC3A-201ENST00000249116 LRPPRCP42704 1394 aaKnown RBP19.14■□□□□ 0.65
APOBEC3A-201ENST00000249116 CDC42BPGQ6DT37 1551 aa19.14■□□□□ 0.65
APOBEC3A-201ENST00000249116 CDK12Q9NYV4 1490 aaPredicted RBP19.13■□□□□ 0.65
APOBEC3A-201ENST00000249116 ESCO1Q5FWF5 840 aa19.13■□□□□ 0.65
APOBEC3A-201ENST00000249116 TECPR2O15040 1411 aa19.13■□□□□ 0.65
APOBEC3A-201ENST00000249116 NPHP3Q7Z494 1330 aa19.12■□□□□ 0.65
APOBEC3A-201ENST00000249116 IFT172Q9UG01 1749 aa19.12■□□□□ 0.65
APOBEC3A-201ENST00000249116 PIK3C2GO75747 1445 aa19.12■□□□□ 0.65
APOBEC3A-201ENST00000249116 ABCC11Q96J66 1382 aa19.12■□□□□ 0.65
APOBEC3A-201ENST00000249116 ADAMTS2O95450 1211 aa19.11■□□□□ 0.65
APOBEC3A-201ENST00000249116 NGLY1Q96IV0 654 aa19.11■□□□□ 0.65
APOBEC3A-201ENST00000249116 QTRT2Q9H974 415 aaKnown RBP19.11■□□□□ 0.65
APOBEC3A-201ENST00000249116 TMEM132EQ6IEE7 984 aa19.1■□□□□ 0.65
APOBEC3A-201ENST00000249116 WAPLQ7Z5K2 1190 aa19.1■□□□□ 0.65
APOBEC3A-201ENST00000249116 RBM6P78332 1123 aaKnown RBP19.09■□□□□ 0.65
APOBEC3A-201ENST00000249116 UPF1Q92900 1129 aaKnown RBP eCLIP19.09■□□□□ 0.65
APOBEC3A-201ENST00000249116 YTHDC2Q9H6S0 1430 aaKnown RBP19.07■□□□□ 0.64
APOBEC3A-201ENST00000249116 KNDC1Q76NI1 1749 aa19.07■□□□□ 0.64
APOBEC3A-201ENST00000249116 NUTM2FA1L443 756 aa19.06■□□□□ 0.64
APOBEC3A-201ENST00000249116 FOXO3O43524 673 aa19.06■□□□□ 0.64
APOBEC3A-201ENST00000249116 SIRT1Q96EB6 747 aa19.06■□□□□ 0.64
APOBEC3A-201ENST00000249116 C14orf93Q9H972 538 aaKnown RBP19.06■□□□□ 0.64
APOBEC3A-201ENST00000249116 PLEKHH1Q9ULM0 1364 aa19.05■□□□□ 0.64
APOBEC3A-201ENST00000249116 USP21Q9UK80 565 aa19.05■□□□□ 0.64
APOBEC3A-201ENST00000249116 PXDNQ92626 1479 aa19.04■□□□□ 0.64
APOBEC3A-201ENST00000249116 DHX57Q6P158 1386 aaKnown RBP19.04■□□□□ 0.64
APOBEC3A-201ENST00000249116 RAB3GAP2Q9H2M9 1393 aa19.04■□□□□ 0.64
APOBEC3A-201ENST00000249116 COL22A1Q8NFW1 1626 aaPredicted RBP19.04■□□□□ 0.64
APOBEC3A-201ENST00000249116 MYOM2P54296 1465 aa19.03■□□□□ 0.64
APOBEC3A-201ENST00000249116 RGS12O14924 1447 aa19.03■□□□□ 0.64
APOBEC3A-201ENST00000249116 XPCQ01831 940 aaPredicted RBP19.02■□□□□ 0.64
APOBEC3A-201ENST00000249116 CFAP70Q5T0N1 1121 aa19.02■□□□□ 0.64
APOBEC3A-201ENST00000249116 TRPC5Q9UL62 973 aaPredicted RBP19.02■□□□□ 0.64
APOBEC3A-201ENST00000249116 NRXN1Q9ULB1 1477 aa19.02■□□□□ 0.64
APOBEC3A-201ENST00000249116 FNBP4Q8N3X1 1017 aaPredicted RBP19.01■□□□□ 0.63
APOBEC3A-201ENST00000249116 FMN2Q9NZ56 1722 aa18.99■□□□□ 0.63
APOBEC3A-201ENST00000249116 KIF1AQ12756 1690 aa18.98■□□□□ 0.63
APOBEC3A-201ENST00000249116 PRAM1Q96QH2 718 aa18.97■□□□□ 0.63
APOBEC3A-201ENST00000249116 KRT28Q7Z3Y7 464 aa18.96■□□□□ 0.63
APOBEC3A-201ENST00000249116 POGKQ9P215 609 aa18.96■□□□□ 0.63
APOBEC3A-201ENST00000249116 SPATA31A3Q5VYP0 1347 aa18.96■□□□□ 0.63
APOBEC3A-201ENST00000249116 ATRNO75882 1429 aa18.96■□□□□ 0.63
APOBEC3A-201ENST00000249116 PSME1Q06323 249 aa18.95■□□□□ 0.62
APOBEC3A-201ENST00000249116 SAFB2Q14151 953 aaKnown RBP eCLIP18.95■□□□□ 0.62
APOBEC3A-201ENST00000249116 PPP4R3CPQ6ZMV5 832 aa18.95■□□□□ 0.62
APOBEC3A-201ENST00000249116 PHF8Q9UPP1 1060 aa18.95■□□□□ 0.62
APOBEC3A-201ENST00000249116 DLC1Q96QB1 1528 aa18.93■□□□□ 0.62
APOBEC3A-201ENST00000249116 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
APOBEC3A-201ENST00000249116 HRCP23327 699 aa18.92■□□□□ 0.62
APOBEC3A-201ENST00000249116 STAC3Q96MF2 364 aa18.92■□□□□ 0.62
APOBEC3A-201ENST00000249116 BCL9LQ86UU0 1499 aa18.92■□□□□ 0.62
APOBEC3A-201ENST00000249116 HAP1P54257 671 aaPredicted RBP18.91■□□□□ 0.62
APOBEC3A-201ENST00000249116 MARF1Q9Y4F3 1742 aaKnown RBP18.91■□□□□ 0.62
APOBEC3A-201ENST00000249116 DCAF11Q8TEB1 546 aa18.91■□□□□ 0.62
APOBEC3A-201ENST00000249116 KDM2AQ9Y2K7 1162 aa18.91■□□□□ 0.62
APOBEC3A-201ENST00000249116 TNS3Q68CZ2 1445 aa18.9■□□□□ 0.62
APOBEC3A-201ENST00000249116 ANKARQ7Z5J8 1434 aa18.89■□□□□ 0.62
APOBEC3A-201ENST00000249116 GJD4Q96KN9 370 aaPredicted RBP18.89■□□□□ 0.61
APOBEC3A-201ENST00000249116 TRAK1Q9UPV9 953 aa18.89■□□□□ 0.61
APOBEC3A-201ENST00000249116 SBNO1A3KN83 1393 aa18.88■□□□□ 0.61
APOBEC3A-201ENST00000249116 ADGRB1O14514 1584 aa18.88■□□□□ 0.61
APOBEC3A-201ENST00000249116 UNC5CLQ8IV45 518 aa18.88■□□□□ 0.61
APOBEC3A-201ENST00000249116 LMOD2Q6P5Q4 547 aa18.87■□□□□ 0.61
APOBEC3A-201ENST00000249116 ADGRB2O60241 1585 aa18.87■□□□□ 0.61
APOBEC3A-201ENST00000249116 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
APOBEC3A-201ENST00000249116 EIF3AQ14152 1382 aaKnown RBP18.87■□□□□ 0.61
APOBEC3A-201ENST00000249116 SLIT2O94813 1529 aa18.86■□□□□ 0.61
APOBEC3A-201ENST00000249116 RGPD8O14715 1765 aaPredicted RBP18.86■□□□□ 0.61
APOBEC3A-201ENST00000249116 USP32Q8NFA0 1604 aa18.86■□□□□ 0.61
APOBEC3A-201ENST00000249116 PMFBP1Q8TBY8 1022 aa18.85■□□□□ 0.61
APOBEC3A-201ENST00000249116 HIRIP3Q9BW71 556 aaPredicted RBP18.85■□□□□ 0.61
APOBEC3A-201ENST00000249116 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.85■□□□□ 0.61
APOBEC3A-201ENST00000249116 MINK1Q8N4C8 1332 aaPredicted RBP18.84■□□□□ 0.61
APOBEC3A-201ENST00000249116 CABLES1Q8TDN4 633 aa18.83■□□□□ 0.61
APOBEC3A-201ENST00000249116 PLEKHG5O94827 1062 aa18.83■□□□□ 0.6
APOBEC3A-201ENST00000249116 GPRASP1Q5JY77 1395 aa18.83■□□□□ 0.6
APOBEC3A-201ENST00000249116 RALGAPBQ86X10 1494 aa18.82■□□□□ 0.6
APOBEC3A-201ENST00000249116 WASLO00401 505 aaPredicted RBP18.82■□□□□ 0.6
APOBEC3A-201ENST00000249116 CCDC125Q86Z20 511 aa18.82■□□□□ 0.6
APOBEC3A-201ENST00000249116 TULP4Q9NRJ4 1543 aa18.81■□□□□ 0.6
APOBEC3A-201ENST00000249116 VPS72Q15906 364 aa18.79■□□□□ 0.6
APOBEC3A-201ENST00000249116 PRR36Q9H6K5 1346 aa18.79■□□□□ 0.6
APOBEC3A-201ENST00000249116 GLI3P10071 1580 aa18.78■□□□□ 0.6
APOBEC3A-201ENST00000249116 CCDC9Q9Y3X0 531 aaKnown RBP18.78■□□□□ 0.6
APOBEC3A-201ENST00000249116 NGDNQ8NEJ9 315 aaKnown RBP18.77■□□□□ 0.6
APOBEC3A-201ENST00000249116 ABCA3Q99758 1704 aa18.76■□□□□ 0.59
APOBEC3A-201ENST00000249116 PLCH1Q4KWH8 1693 aa18.75■□□□□ 0.59
APOBEC3A-201ENST00000249116 NWD2Q9ULI1 1742 aa18.75■□□□□ 0.59
APOBEC3A-201ENST00000249116 FAM83GA6ND36 823 aa18.74■□□□□ 0.59
APOBEC3A-201ENST00000249116 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
APOBEC3A-201ENST00000249116 TRPM3Q9HCF6 1732 aaPredicted RBP18.74■□□□□ 0.59
APOBEC3A-201ENST00000249116 PAK3O75914 559 aaPredicted RBP18.74■□□□□ 0.59
APOBEC3A-201ENST00000249116 ARHGEF28Q8N1W1 1705 aaKnown RBP18.73■□□□□ 0.59
APOBEC3A-201ENST00000249116 ZRANB1Q9UGI0 708 aa18.73■□□□□ 0.59
APOBEC3A-201ENST00000249116 NUDT16Q96DE0 195 aaKnown RBP18.72■□□□□ 0.59
APOBEC3A-201ENST00000249116 ALS2Q96Q42 1657 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms