RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 INSRP06213 1382 aa20.71■□□□□ 0.91
LRFN1-201ENST00000248668 POGKQ9P215 609 aa20.71■□□□□ 0.91
LRFN1-201ENST00000248668 RIMBP3CA6NJZ7 1639 aa20.7■□□□□ 0.9
LRFN1-201ENST00000248668 RIMBP3BA6NNM3 1639 aa20.7■□□□□ 0.9
LRFN1-201ENST00000248668 RIMBP3Q9UFD9 1639 aa20.7■□□□□ 0.9
LRFN1-201ENST00000248668 DEKP35659 375 aaKnown RBP20.7■□□□□ 0.9
LRFN1-201ENST00000248668 GLI2P10070 1586 aa20.7■□□□□ 0.9
LRFN1-201ENST00000248668 PRAM1Q96QH2 718 aa20.7■□□□□ 0.9
LRFN1-201ENST00000248668 MTHFSP49914 203 aa20.69■□□□□ 0.9
LRFN1-201ENST00000248668 ZNF521Q96K83 1311 aa20.69■□□□□ 0.9
LRFN1-201ENST00000248668 MYO3AQ8NEV4 1616 aa20.69■□□□□ 0.9
LRFN1-201ENST00000248668 ARHGAP31Q2M1Z3 1444 aa20.68■□□□□ 0.9
LRFN1-201ENST00000248668 CGNL1Q0VF96 1302 aa20.67■□□□□ 0.9
LRFN1-201ENST00000248668 FANCIQ9NVI1 1328 aa20.67■□□□□ 0.9
LRFN1-201ENST00000248668 SLFN5Q08AF3 891 aa20.67■□□□□ 0.9
LRFN1-201ENST00000248668 PIK3C2BO00750 1634 aa20.67■□□□□ 0.9
LRFN1-201ENST00000248668 MYO5BQ9ULV0 1848 aa20.67■□□□□ 0.9
LRFN1-201ENST00000248668 GGNBP2Q9H3C7 697 aa20.65■□□□□ 0.9
LRFN1-201ENST00000248668 TULP4Q9NRJ4 1543 aa20.64■□□□□ 0.9
LRFN1-201ENST00000248668 BCAR3O75815 825 aa20.63■□□□□ 0.89
LRFN1-201ENST00000248668 DIP2BQ9P265 1576 aa20.62■□□□□ 0.89
LRFN1-201ENST00000248668 RTN4Q9NQC3 1192 aaKnown RBP20.62■□□□□ 0.89
LRFN1-201ENST00000248668 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.62■□□□□ 0.89
LRFN1-201ENST00000248668 WAPLQ7Z5K2 1190 aa20.61■□□□□ 0.89
LRFN1-201ENST00000248668 ZC3H13Q5T200 1668 aaKnown RBP20.61■□□□□ 0.89
LRFN1-201ENST00000248668 PREX1Q8TCU6 1659 aa20.61■□□□□ 0.89
LRFN1-201ENST00000248668 POLR3AO14802 1390 aaPredicted RBP20.6■□□□□ 0.89
LRFN1-201ENST00000248668 ARHGEF28Q8N1W1 1705 aaKnown RBP20.6■□□□□ 0.89
LRFN1-201ENST00000248668 U2AF1L5P0DN76 240 aaPredicted RBP20.59■□□□□ 0.89
LRFN1-201ENST00000248668 U2AF1Q01081 240 aaKnown RBP eCLIP20.59■□□□□ 0.89
LRFN1-201ENST00000248668 NPM2Q86SE8 214 aaKnown RBP20.59■□□□□ 0.89
LRFN1-201ENST00000248668 A0A1W2PP64 1363 aa20.59■□□□□ 0.89
LRFN1-201ENST00000248668 ANKRD36BQ8N2N9 1353 aa20.59■□□□□ 0.89
LRFN1-201ENST00000248668 WWC1Q8IX03 1113 aa20.59■□□□□ 0.89
LRFN1-201ENST00000248668 TCP11L2Q8N4U5 519 aa20.59■□□□□ 0.89
LRFN1-201ENST00000248668 CFAP53Q96M91 514 aa20.58■□□□□ 0.88
LRFN1-201ENST00000248668 NBR1Q14596 966 aa20.57■□□□□ 0.88
LRFN1-201ENST00000248668 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
LRFN1-201ENST00000248668 ESF1Q9H501 851 aaKnown RBP20.57■□□□□ 0.88
LRFN1-201ENST00000248668 YTHDC2Q9H6S0 1430 aaKnown RBP20.57■□□□□ 0.88
LRFN1-201ENST00000248668 TMEM131LA2VDJ0 1609 aa20.57■□□□□ 0.88
LRFN1-201ENST00000248668 E9PSI1 815 aa20.57■□□□□ 0.88
LRFN1-201ENST00000248668 U2SURPO15042 1029 aaKnown RBP20.57■□□□□ 0.88
LRFN1-201ENST00000248668 CDK19Q9BWU1 502 aa20.57■□□□□ 0.88
LRFN1-201ENST00000248668 CABP1Q9NZU7 370 aa20.55■□□□□ 0.88
LRFN1-201ENST00000248668 FBLN1P23142 703 aa20.55■□□□□ 0.88
LRFN1-201ENST00000248668 RUNDC1Q96C34 613 aa20.55■□□□□ 0.88
LRFN1-201ENST00000248668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.54■□□□□ 0.88
LRFN1-201ENST00000248668 TRMT2AQ8IZ69 625 aaKnown RBP20.54■□□□□ 0.88
LRFN1-201ENST00000248668 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.54■□□□□ 0.88
LRFN1-201ENST00000248668 ZFYVE9O95405 1425 aa20.53■□□□□ 0.88
LRFN1-201ENST00000248668 BCL2L13Q9BXK5 485 aa20.53■□□□□ 0.88
LRFN1-201ENST00000248668 NKTRP30414 1462 aaKnown RBP20.53■□□□□ 0.88
LRFN1-201ENST00000248668 PPM1GO15355 546 aaPredicted RBP20.52■□□□□ 0.88
LRFN1-201ENST00000248668 CANXP27824 592 aaKnown RBP20.52■□□□□ 0.88
LRFN1-201ENST00000248668 FRAT1Q92837 279 aaPredicted RBP20.52■□□□□ 0.88
LRFN1-201ENST00000248668 PTPRMP28827 1452 aa20.52■□□□□ 0.88
LRFN1-201ENST00000248668 TERF2IPQ9NYB0 399 aa20.51■□□□□ 0.87
LRFN1-201ENST00000248668 CLTCQ00610 1675 aaKnown RBP20.51■□□□□ 0.87
LRFN1-201ENST00000248668 FYB1O15117 783 aa20.51■□□□□ 0.87
LRFN1-201ENST00000248668 ANP32AP39687 249 aaKnown RBP20.49■□□□□ 0.87
LRFN1-201ENST00000248668 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
LRFN1-201ENST00000248668 TCERG1O14776 1098 aaKnown RBP20.49■□□□□ 0.87
LRFN1-201ENST00000248668 PDE4AP27815 886 aa20.49■□□□□ 0.87
LRFN1-201ENST00000248668 PAK3O75914 559 aaPredicted RBP20.48■□□□□ 0.87
LRFN1-201ENST00000248668 TXNDC2Q86VQ3 553 aa20.48■□□□□ 0.87
LRFN1-201ENST00000248668 PUS7Q96PZ0 661 aaKnown RBP20.48■□□□□ 0.87
LRFN1-201ENST00000248668 RIMS2Q9UQ26 1411 aa20.48■□□□□ 0.87
LRFN1-201ENST00000248668 HDGFL2Q7Z4V5 671 aaPredicted RBP20.48■□□□□ 0.87
LRFN1-201ENST00000248668 PANK1Q8TE04 598 aa20.48■□□□□ 0.87
LRFN1-201ENST00000248668 ATAD2Q6PL18 1390 aa20.47■□□□□ 0.87
LRFN1-201ENST00000248668 SHPRHQ149N8 1683 aa20.47■□□□□ 0.87
LRFN1-201ENST00000248668 ABCC11Q96J66 1382 aa20.46■□□□□ 0.87
LRFN1-201ENST00000248668 A2ML1A8K2U0 1454 aa20.46■□□□□ 0.87
LRFN1-201ENST00000248668 NCKAP5LQ9HCH0 1330 aa20.46■□□□□ 0.87
LRFN1-201ENST00000248668 COG6Q9Y2V7 657 aa20.45■□□□□ 0.86
LRFN1-201ENST00000248668 TNNQ9UQP3 1299 aa20.45■□□□□ 0.86
LRFN1-201ENST00000248668 RGS3P49796 1198 aa20.44■□□□□ 0.86
LRFN1-201ENST00000248668 ZMYM3Q14202 1370 aa20.43■□□□□ 0.86
LRFN1-201ENST00000248668 TSR2Q969E8 191 aaKnown RBP20.43■□□□□ 0.86
LRFN1-201ENST00000248668 NSD2O96028 1365 aa20.43■□□□□ 0.86
LRFN1-201ENST00000248668 NOP58Q9Y2X3 529 aaKnown RBP20.43■□□□□ 0.86
LRFN1-201ENST00000248668 CLUAP1Q96AJ1 413 aa20.42■□□□□ 0.86
LRFN1-201ENST00000248668 NUTM2FA1L443 756 aa20.42■□□□□ 0.86
LRFN1-201ENST00000248668 PPP6R1Q9UPN7 881 aa20.42■□□□□ 0.86
LRFN1-201ENST00000248668 CD163L1Q9NR16 1453 aa20.41■□□□□ 0.86
LRFN1-201ENST00000248668 METP08581 1390 aa20.41■□□□□ 0.86
LRFN1-201ENST00000248668 NGEFQ8N5V2 710 aa20.41■□□□□ 0.86
LRFN1-201ENST00000248668 KDM2BQ8NHM5 1336 aa20.41■□□□□ 0.86
LRFN1-201ENST00000248668 CEBPAP49715 358 aaPredicted RBP20.4■□□□□ 0.86
LRFN1-201ENST00000248668 BACH2Q9BYV9 841 aa20.4■□□□□ 0.86
LRFN1-201ENST00000248668 ZRANB1Q9UGI0 708 aa20.4■□□□□ 0.86
LRFN1-201ENST00000248668 AGLP35573 1532 aa20.39■□□□□ 0.86
LRFN1-201ENST00000248668 CENPQQ7L2Z9 268 aaPredicted RBP20.39■□□□□ 0.86
LRFN1-201ENST00000248668 USP32Q8NFA0 1604 aa20.39■□□□□ 0.85
LRFN1-201ENST00000248668 NINLQ9Y2I6 1382 aa20.39■□□□□ 0.85
LRFN1-201ENST00000248668 MAPK8IP3Q9UPT6 1336 aa20.39■□□□□ 0.85
LRFN1-201ENST00000248668 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
LRFN1-201ENST00000248668 ARHGEF40Q8TER5 1519 aa20.38■□□□□ 0.85
LRFN1-201ENST00000248668 IPO9Q96P70 1041 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms