RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 RIMS2Q9UQ26 1411 aa24.77■■□□□ 1.56
TUBA4A-201ENST00000248437 WDR43Q15061 677 aaKnown RBP eCLIP24.76■■□□□ 1.55
TUBA4A-201ENST00000248437 PPP4R2Q9NY27 417 aa24.76■■□□□ 1.55
TUBA4A-201ENST00000248437 UBR1Q8IWV7 1749 aa24.76■■□□□ 1.55
TUBA4A-201ENST00000248437 SLC12A5Q9H2X9 1139 aa24.76■■□□□ 1.55
TUBA4A-201ENST00000248437 NINLQ9Y2I6 1382 aa24.75■■□□□ 1.55
TUBA4A-201ENST00000248437 ADAMTS8Q9UP79 889 aa24.75■■□□□ 1.55
TUBA4A-201ENST00000248437 SENP3-EIF4A1A0A087X0R7 540 aa24.74■■□□□ 1.55
TUBA4A-201ENST00000248437 NLRP1Q9C000 1473 aa24.73■■□□□ 1.55
TUBA4A-201ENST00000248437 ANKRD36BQ8N2N9 1353 aa24.73■■□□□ 1.55
TUBA4A-201ENST00000248437 DLC1Q96QB1 1528 aa24.73■■□□□ 1.55
TUBA4A-201ENST00000248437 STK26Q9P289 416 aa24.7■■□□□ 1.55
TUBA4A-201ENST00000248437 POLR3AO14802 1390 aaPredicted RBP24.69■■□□□ 1.54
TUBA4A-201ENST00000248437 NSD2O96028 1365 aa24.69■■□□□ 1.54
TUBA4A-201ENST00000248437 NRXN3Q9Y4C0 1643 aa24.69■■□□□ 1.54
TUBA4A-201ENST00000248437 TMEM2Q9UHN6 1383 aa24.68■■□□□ 1.54
TUBA4A-201ENST00000248437 CGNL1Q0VF96 1302 aa24.68■■□□□ 1.54
TUBA4A-201ENST00000248437 TSHZ2Q9NRE2 1034 aa24.67■■□□□ 1.54
TUBA4A-201ENST00000248437 SALL2Q9Y467 1007 aaPredicted RBP24.67■■□□□ 1.54
TUBA4A-201ENST00000248437 ATAD2Q6PL18 1390 aa24.67■■□□□ 1.54
TUBA4A-201ENST00000248437 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.67■■□□□ 1.54
TUBA4A-201ENST00000248437 PRAM1Q96QH2 718 aa24.67■■□□□ 1.54
TUBA4A-201ENST00000248437 CABP2Q9NPB3 220 aa24.65■■□□□ 1.54
TUBA4A-201ENST00000248437 POGKQ9P215 609 aa24.65■■□□□ 1.54
TUBA4A-201ENST00000248437 SAFB2Q14151 953 aaKnown RBP eCLIP24.64■■□□□ 1.54
TUBA4A-201ENST00000248437 MORC1Q86VD1 984 aa24.64■■□□□ 1.54
TUBA4A-201ENST00000248437 SHPRHQ149N8 1683 aa24.62■■□□□ 1.53
TUBA4A-201ENST00000248437 LTKP29376 864 aa24.62■■□□□ 1.53
TUBA4A-201ENST00000248437 KNDC1Q76NI1 1749 aa24.62■■□□□ 1.53
TUBA4A-201ENST00000248437 SRPK2P78362 688 aaKnown RBP24.61■■□□□ 1.53
TUBA4A-201ENST00000248437 RCAN3Q9UKA8 241 aa24.61■■□□□ 1.53
TUBA4A-201ENST00000248437 ANKRD26Q9UPS8 1709 aa24.61■■□□□ 1.53
TUBA4A-201ENST00000248437 ABCC11Q96J66 1382 aa24.61■■□□□ 1.53
TUBA4A-201ENST00000248437 HDGFP51858 240 aaKnown RBP24.6■■□□□ 1.53
TUBA4A-201ENST00000248437 CDCA7LQ96GN5 454 aa24.6■■□□□ 1.53
TUBA4A-201ENST00000248437 MINK1Q8N4C8 1332 aaPredicted RBP24.6■■□□□ 1.53
TUBA4A-201ENST00000248437 A0A1W2PP64 1363 aa24.59■■□□□ 1.53
TUBA4A-201ENST00000248437 PLEKHH1Q9ULM0 1364 aa24.59■■□□□ 1.53
TUBA4A-201ENST00000248437 ZNF521Q96K83 1311 aa24.59■■□□□ 1.53
TUBA4A-201ENST00000248437 CEP170BQ9Y4F5 1589 aaPredicted RBP24.59■■□□□ 1.53
TUBA4A-201ENST00000248437 NGEFQ8N5V2 710 aa24.57■■□□□ 1.52
TUBA4A-201ENST00000248437 RRP1P56182 461 aaKnown RBP24.57■■□□□ 1.52
TUBA4A-201ENST00000248437 TXNDC2Q86VQ3 553 aa24.56■■□□□ 1.52
TUBA4A-201ENST00000248437 CD163L1Q9NR16 1453 aa24.56■■□□□ 1.52
TUBA4A-201ENST00000248437 ARHGAP23Q9P227 1491 aa24.56■■□□□ 1.52
TUBA4A-201ENST00000248437 TERF2IPQ9NYB0 399 aa24.56■■□□□ 1.52
TUBA4A-201ENST00000248437 MED14O60244 1454 aa24.56■■□□□ 1.52
TUBA4A-201ENST00000248437 SLIT1O75093 1534 aa24.55■■□□□ 1.52
TUBA4A-201ENST00000248437 THEMISQ8N1K5 641 aaPredicted RBP24.54■■□□□ 1.52
TUBA4A-201ENST00000248437 METP08581 1390 aa24.54■■□□□ 1.52
TUBA4A-201ENST00000248437 TECPR2O15040 1411 aa24.53■■□□□ 1.52
TUBA4A-201ENST00000248437 CDK19Q9BWU1 502 aa24.53■■□□□ 1.52
TUBA4A-201ENST00000248437 B4GALNT3Q6L9W6 998 aa24.52■■□□□ 1.52
TUBA4A-201ENST00000248437 KIF20BQ96Q89 1820 aa24.52■■□□□ 1.52
TUBA4A-201ENST00000248437 CPS1P31327 1500 aa24.51■■□□□ 1.51
TUBA4A-201ENST00000248437 ADAMTS13Q76LX8 1427 aa24.51■■□□□ 1.51
TUBA4A-201ENST00000248437 GOLGA2Q08379 1002 aa24.51■■□□□ 1.51
TUBA4A-201ENST00000248437 FAM135BQ49AJ0 1406 aa24.5■■□□□ 1.51
TUBA4A-201ENST00000248437 SIRT1Q96EB6 747 aa24.5■■□□□ 1.51
TUBA4A-201ENST00000248437 SETD1BQ9UPS6 1966 aaKnown RBP24.5■■□□□ 1.51
TUBA4A-201ENST00000248437 PLEKHG1Q9ULL1 1385 aa24.5■■□□□ 1.51
TUBA4A-201ENST00000248437 EID1Q9Y6B2 187 aa24.5■■□□□ 1.51
TUBA4A-201ENST00000248437 ATP7BP35670 1465 aa24.49■■□□□ 1.51
TUBA4A-201ENST00000248437 CCDC146Q8IYE0 955 aa24.49■■□□□ 1.51
TUBA4A-201ENST00000248437 CFAP53Q96M91 514 aa24.49■■□□□ 1.51
TUBA4A-201ENST00000248437 ZNF142P52746 1687 aaPredicted RBP24.49■■□□□ 1.51
TUBA4A-201ENST00000248437 TNNT2P45379 298 aaPredicted RBP24.48■■□□□ 1.51
TUBA4A-201ENST00000248437 MTHFSP49914 203 aa24.48■■□□□ 1.51
TUBA4A-201ENST00000248437 APAF1O14727 1248 aa24.47■■□□□ 1.51
TUBA4A-201ENST00000248437 DUSP27Q5VZP5 1158 aa24.47■■□□□ 1.51
TUBA4A-201ENST00000248437 HDGFL2Q7Z4V5 671 aaPredicted RBP24.47■■□□□ 1.51
TUBA4A-201ENST00000248437 WAPLQ7Z5K2 1190 aa24.47■■□□□ 1.51
TUBA4A-201ENST00000248437 SLC26A8Q96RN1 970 aa24.46■■□□□ 1.51
TUBA4A-201ENST00000248437 SLFN5Q08AF3 891 aa24.44■■□□□ 1.5
TUBA4A-201ENST00000248437 TRMT2AQ8IZ69 625 aaKnown RBP24.44■■□□□ 1.5
TUBA4A-201ENST00000248437 IQSEC2Q5JU85 1478 aa24.42■■□□□ 1.5
TUBA4A-201ENST00000248437 FYB1O15117 783 aa24.42■■□□□ 1.5
TUBA4A-201ENST00000248437 CCDC136Q96JN2 1154 aa24.42■■□□□ 1.5
TUBA4A-201ENST00000248437 CABP1Q9NZU7 370 aa24.42■■□□□ 1.5
TUBA4A-201ENST00000248437 RUNDC1Q96C34 613 aa24.41■■□□□ 1.5
TUBA4A-201ENST00000248437 WASLO00401 505 aaPredicted RBP24.4■■□□□ 1.5
TUBA4A-201ENST00000248437 KDM4FA0A1W2PPD8 638 aa24.4■■□□□ 1.5
TUBA4A-201ENST00000248437 GGNBP2Q9H3C7 697 aa24.39■■□□□ 1.5
TUBA4A-201ENST00000248437 E9PSI1 815 aa24.39■■□□□ 1.49
TUBA4A-201ENST00000248437 NCBP3Q53F19 620 aaKnown RBP24.38■■□□□ 1.49
TUBA4A-201ENST00000248437 COL3A1P02461 1466 aaPredicted RBP24.38■■□□□ 1.49
TUBA4A-201ENST00000248437 NKTRP30414 1462 aaKnown RBP24.38■■□□□ 1.49
TUBA4A-201ENST00000248437 ADGRB2O60241 1585 aa24.38■■□□□ 1.49
TUBA4A-201ENST00000248437 CPSF1Q10570 1443 aaKnown RBP24.37■■□□□ 1.49
TUBA4A-201ENST00000248437 PTPRUQ92729 1446 aa24.37■■□□□ 1.49
TUBA4A-201ENST00000248437 MON2Q7Z3U7 1717 aa24.36■■□□□ 1.49
TUBA4A-201ENST00000248437 CDC42BPGQ6DT37 1551 aa24.35■■□□□ 1.49
TUBA4A-201ENST00000248437 PPIP5K1Q6PFW1 1433 aa24.35■■□□□ 1.49
TUBA4A-201ENST00000248437 AKAP12Q02952 1782 aa24.35■■□□□ 1.49
TUBA4A-201ENST00000248437 ANKLE2Q86XL3 938 aa24.35■■□□□ 1.49
TUBA4A-201ENST00000248437 EXOC6Q8TAG9 804 aa24.35■■□□□ 1.49
TUBA4A-201ENST00000248437 ITSN1Q15811 1721 aa24.34■■□□□ 1.49
TUBA4A-201ENST00000248437 EDC4Q6P2E9 1401 aaKnown RBP24.34■■□□□ 1.49
TUBA4A-201ENST00000248437 ROBO2Q9HCK4 1378 aa24.34■■□□□ 1.49
TUBA4A-201ENST00000248437 WWC1Q8IX03 1113 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms