RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 KANK1Q14678 1352 aa25.64■■□□□ 1.69
CACTIN-202ENST00000248420 U2AF1L5P0DN76 240 aaPredicted RBP25.61■■□□□ 1.69
CACTIN-202ENST00000248420 U2AF1Q01081 240 aaKnown RBP eCLIP25.61■■□□□ 1.69
CACTIN-202ENST00000248420 NGEFQ8N5V2 710 aa25.61■■□□□ 1.69
CACTIN-202ENST00000248420 CHD1O14646 1710 aa25.61■■□□□ 1.69
CACTIN-202ENST00000248420 MFAP1P55081 439 aaKnown RBP25.61■■□□□ 1.69
CACTIN-202ENST00000248420 RWDD1Q9H446 243 aaPredicted RBP25.6■■□□□ 1.69
CACTIN-202ENST00000248420 FAM43AQ8N2R8 423 aa25.59■■□□□ 1.69
CACTIN-202ENST00000248420 NINLQ9Y2I6 1382 aa25.59■■□□□ 1.69
CACTIN-202ENST00000248420 ABCA6Q8N139 1617 aa25.59■■□□□ 1.69
CACTIN-202ENST00000248420 FTSJ3Q8IY81 847 aaKnown RBP25.59■■□□□ 1.69
CACTIN-202ENST00000248420 VIRMAQ69YN4 1812 aaKnown RBP25.58■■□□□ 1.69
CACTIN-202ENST00000248420 SAFB2Q14151 953 aaKnown RBP eCLIP25.58■■□□□ 1.69
CACTIN-202ENST00000248420 ZFYVE16Q7Z3T8 1539 aa25.58■■□□□ 1.69
CACTIN-202ENST00000248420 RRAGDQ9NQL2 400 aaPredicted RBP25.57■■□□□ 1.68
CACTIN-202ENST00000248420 NOS1P29475 1434 aa25.56■■□□□ 1.68
CACTIN-202ENST00000248420 WDR63Q8IWG1 891 aa25.56■■□□□ 1.68
CACTIN-202ENST00000248420 MVPQ14764 893 aaKnown RBP25.56■■□□□ 1.68
CACTIN-202ENST00000248420 PHF23Q9BUL5 403 aaPredicted RBP25.56■■□□□ 1.68
CACTIN-202ENST00000248420 ZCCHC11Q5TAX3 1644 aaKnown RBP25.55■■□□□ 1.68
CACTIN-202ENST00000248420 MAP3K4Q9Y6R4 1608 aa25.54■■□□□ 1.68
CACTIN-202ENST00000248420 SLC24A1O60721 1099 aa25.53■■□□□ 1.68
CACTIN-202ENST00000248420 DZIP1LQ8IYY4 767 aaKnown RBP25.52■■□□□ 1.68
CACTIN-202ENST00000248420 PANK2Q9BZ23 570 aa25.52■■□□□ 1.68
CACTIN-202ENST00000248420 SMC4Q9NTJ3 1288 aa25.52■■□□□ 1.68
CACTIN-202ENST00000248420 U2SURPO15042 1029 aaKnown RBP25.52■■□□□ 1.68
CACTIN-202ENST00000248420 ZKSCAN2Q63HK3 967 aa25.52■■□□□ 1.68
CACTIN-202ENST00000248420 SHPRHQ149N8 1683 aa25.52■■□□□ 1.68
CACTIN-202ENST00000248420 RTEL1-TNFRSF6BF6WH68 1400 aa25.52■■□□□ 1.68
CACTIN-202ENST00000248420 EXOSC9Q06265 439 aaKnown RBP25.51■■□□□ 1.67
CACTIN-202ENST00000248420 ITPRIPQ8IWB1 547 aa25.51■■□□□ 1.67
CACTIN-202ENST00000248420 CFAP53Q96M91 514 aa25.51■■□□□ 1.67
CACTIN-202ENST00000248420 C22orf23Q9BZE7 217 aa25.51■■□□□ 1.67
CACTIN-202ENST00000248420 TET3O43151 1660 aa25.51■■□□□ 1.67
CACTIN-202ENST00000248420 MYH16Q9H6N6 1097 aa25.5■■□□□ 1.67
CACTIN-202ENST00000248420 XRCC6P12956 609 aaKnown RBP eCLIP25.49■■□□□ 1.67
CACTIN-202ENST00000248420 CABP2Q9NPB3 220 aa25.49■■□□□ 1.67
CACTIN-202ENST00000248420 IQSEC2Q5JU85 1478 aa25.49■■□□□ 1.67
CACTIN-202ENST00000248420 CFAP65Q6ZU64 1925 aaKnown RBP25.48■■□□□ 1.67
CACTIN-202ENST00000248420 TRIM27P14373 513 aa25.48■■□□□ 1.67
CACTIN-202ENST00000248420 MCM4P33991 863 aa25.48■■□□□ 1.67
CACTIN-202ENST00000248420 GGT6Q6P531 493 aa25.47■■□□□ 1.67
CACTIN-202ENST00000248420 SHROOM2Q13796 1616 aa25.47■■□□□ 1.67
CACTIN-202ENST00000248420 SSH1Q8WYL5 1049 aa25.47■■□□□ 1.67
CACTIN-202ENST00000248420 ATP7AQ04656 1500 aa25.46■■□□□ 1.67
CACTIN-202ENST00000248420 MYOM2P54296 1465 aa25.45■■□□□ 1.67
CACTIN-202ENST00000248420 L1TD1Q5T7N2 865 aaKnown RBP25.45■■□□□ 1.67
CACTIN-202ENST00000248420 KIAA1210Q9ULL0 1709 aa25.45■■□□□ 1.66
CACTIN-202ENST00000248420 ZNF518AQ6AHZ1 1483 aa25.45■■□□□ 1.66
CACTIN-202ENST00000248420 DEPDC5O75140 1603 aa25.45■■□□□ 1.66
CACTIN-202ENST00000248420 GOLGA6L3A6NEY3 463 aa25.44■■□□□ 1.66
CACTIN-202ENST00000248420 GGNBP2Q9H3C7 697 aa25.44■■□□□ 1.66
CACTIN-202ENST00000248420 NOB1Q9ULX3 412 aaKnown RBP25.44■■□□□ 1.66
CACTIN-202ENST00000248420 FANCAO15360 1455 aa25.44■■□□□ 1.66
CACTIN-202ENST00000248420 CCDC27Q2M243 656 aa25.43■■□□□ 1.66
CACTIN-202ENST00000248420 C14orf93Q9H972 538 aaKnown RBP25.43■■□□□ 1.66
CACTIN-202ENST00000248420 MROH2AA6NES4 1674 aa25.43■■□□□ 1.66
CACTIN-202ENST00000248420 AAMPQ13685 434 aa25.42■■□□□ 1.66
CACTIN-202ENST00000248420 RSPH6AQ9H0K4 717 aa25.41■■□□□ 1.66
CACTIN-202ENST00000248420 SBNO2Q9Y2G9 1366 aa25.41■■□□□ 1.66
CACTIN-202ENST00000248420 TRAK2O60296 914 aa25.4■■□□□ 1.66
CACTIN-202ENST00000248420 TMEM57Q8N5G2 664 aa25.4■■□□□ 1.66
CACTIN-202ENST00000248420 STK26Q9P289 416 aa25.4■■□□□ 1.66
CACTIN-202ENST00000248420 VWDEQ8N2E2 1590 aa25.39■■□□□ 1.66
CACTIN-202ENST00000248420 KIF1BO60333 1816 aa25.39■■□□□ 1.65
CACTIN-202ENST00000248420 LNPKQ9C0E8 428 aa25.39■■□□□ 1.65
CACTIN-202ENST00000248420 TRIM35Q9UPQ4 493 aa25.39■■□□□ 1.65
CACTIN-202ENST00000248420 CHMP5Q9NZZ3 219 aa25.38■■□□□ 1.65
CACTIN-202ENST00000248420 TMPOP42166 694 aaKnown RBP25.38■■□□□ 1.65
CACTIN-202ENST00000248420 ATF7IPQ6VMQ6 1270 aa25.38■■□□□ 1.65
CACTIN-202ENST00000248420 ADGRL1O94910 1474 aa25.38■■□□□ 1.65
CACTIN-202ENST00000248420 FOXD4L1Q9NU39 408 aa25.37■■□□□ 1.65
CACTIN-202ENST00000248420 MROH1Q8NDA8 1641 aa25.36■■□□□ 1.65
CACTIN-202ENST00000248420 HSCBQ8IWL3 235 aa25.34■■□□□ 1.65
CACTIN-202ENST00000248420 DDX19BQ9UMR2 479 aa25.34■■□□□ 1.65
CACTIN-202ENST00000248420 CD109Q6YHK3 1445 aa25.34■■□□□ 1.65
CACTIN-202ENST00000248420 FSD2A1L4K1 749 aa25.34■■□□□ 1.65
CACTIN-202ENST00000248420 PLEKHF1Q96S99 279 aa25.34■■□□□ 1.65
CACTIN-202ENST00000248420 NRXN1Q9ULB1 1477 aa25.33■■□□□ 1.65
CACTIN-202ENST00000248420 RIPK4P57078 832 aa25.33■■□□□ 1.65
CACTIN-202ENST00000248420 FBLN1P23142 703 aa25.33■■□□□ 1.65
CACTIN-202ENST00000248420 HDAC1Q13547 482 aaPredicted RBP25.33■■□□□ 1.65
CACTIN-202ENST00000248420 SRPK2P78362 688 aaKnown RBP25.32■■□□□ 1.64
CACTIN-202ENST00000248420 EVC2Q86UK5 1308 aa25.32■■□□□ 1.64
CACTIN-202ENST00000248420 PPRC1Q5VV67 1664 aaKnown RBP25.32■■□□□ 1.64
CACTIN-202ENST00000248420 QRICH2Q9H0J4 1663 aa25.32■■□□□ 1.64
CACTIN-202ENST00000248420 EFCAB6Q5THR3 1501 aa25.32■■□□□ 1.64
CACTIN-202ENST00000248420 INO80Q9ULG1 1556 aaPredicted RBP25.32■■□□□ 1.64
CACTIN-202ENST00000248420 C1orf115Q9H7X2 142 aa25.31■■□□□ 1.64
CACTIN-202ENST00000248420 MYO3AQ8NEV4 1616 aa25.3■■□□□ 1.64
CACTIN-202ENST00000248420 SMC5Q8IY18 1101 aa25.3■■□□□ 1.64
CACTIN-202ENST00000248420 ZBTB40Q9NUA8 1239 aa25.3■■□□□ 1.64
CACTIN-202ENST00000248420 ZMYM3Q14202 1370 aa25.29■■□□□ 1.64
CACTIN-202ENST00000248420 ZNF692Q9BU19 519 aaPredicted RBP25.29■■□□□ 1.64
CACTIN-202ENST00000248420 IFT172Q9UG01 1749 aa25.29■■□□□ 1.64
CACTIN-202ENST00000248420 NPATQ14207 1427 aa25.28■■□□□ 1.64
CACTIN-202ENST00000248420 ANKRD36BQ8N2N9 1353 aa25.28■■□□□ 1.64
CACTIN-202ENST00000248420 ADGRB1O14514 1584 aa25.27■■□□□ 1.64
CACTIN-202ENST00000248420 UHRF1BP1LA0JNW5 1464 aa25.27■■□□□ 1.64
CACTIN-202ENST00000248420 NAP1L5Q96NT1 182 aaPredicted RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms