RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TMF1P82094 1093 aa23.33■■□□□ 1.33
CDKN1A-201ENST00000244741 TECPR2O15040 1411 aa23.31■■□□□ 1.32
CDKN1A-201ENST00000244741 PIK3R4Q99570 1358 aa23.31■■□□□ 1.32
CDKN1A-201ENST00000244741 CHD2O14647 1828 aaKnown RBP23.31■■□□□ 1.32
CDKN1A-201ENST00000244741 CCDC7Q96M83 1385 aa23.31■■□□□ 1.32
CDKN1A-201ENST00000244741 DLC1Q96QB1 1528 aa23.3■■□□□ 1.32
CDKN1A-201ENST00000244741 CPS1P31327 1500 aa23.29■■□□□ 1.32
CDKN1A-201ENST00000244741 KNDC1Q76NI1 1749 aa23.29■■□□□ 1.32
CDKN1A-201ENST00000244741 XRN1Q8IZH2 1706 aaKnown RBP23.29■■□□□ 1.32
CDKN1A-201ENST00000244741 ZNF335Q9H4Z2 1342 aaPredicted RBP23.28■■□□□ 1.32
CDKN1A-201ENST00000244741 CABP2Q9NPB3 220 aa23.27■■□□□ 1.32
CDKN1A-201ENST00000244741 FAM135BQ49AJ0 1406 aa23.27■■□□□ 1.32
CDKN1A-201ENST00000244741 SIRT1Q96EB6 747 aa23.25■■□□□ 1.31
CDKN1A-201ENST00000244741 PTCH1Q13635 1447 aa23.25■■□□□ 1.31
CDKN1A-201ENST00000244741 NUTM2FA1L443 756 aa23.24■■□□□ 1.31
CDKN1A-201ENST00000244741 SRPK2P78362 688 aaKnown RBP23.24■■□□□ 1.31
CDKN1A-201ENST00000244741 PROSER2Q86WR7 435 aaPredicted RBP23.24■■□□□ 1.31
CDKN1A-201ENST00000244741 STRCP1A6NGW2 1772 aa23.24■■□□□ 1.31
CDKN1A-201ENST00000244741 SBNO2Q9Y2G9 1366 aa23.24■■□□□ 1.31
CDKN1A-201ENST00000244741 EVC2Q86UK5 1308 aa23.23■■□□□ 1.31
CDKN1A-201ENST00000244741 CDK19Q9BWU1 502 aa23.23■■□□□ 1.31
CDKN1A-201ENST00000244741 DMRT2Q9Y5R5 561 aa23.23■■□□□ 1.31
CDKN1A-201ENST00000244741 TULP4Q9NRJ4 1543 aa23.23■■□□□ 1.31
CDKN1A-201ENST00000244741 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.23■■□□□ 1.31
CDKN1A-201ENST00000244741 C14orf37Q86TY3 774 aa23.23■■□□□ 1.31
CDKN1A-201ENST00000244741 NWD1Q149M9 1564 aa23.19■■□□□ 1.3
CDKN1A-201ENST00000244741 WASLO00401 505 aaPredicted RBP23.18■■□□□ 1.3
CDKN1A-201ENST00000244741 CDCA8Q53HL2 280 aa23.18■■□□□ 1.3
CDKN1A-201ENST00000244741 TMC1Q8TDI8 760 aa23.18■■□□□ 1.3
CDKN1A-201ENST00000244741 SLC24A1O60721 1099 aa23.17■■□□□ 1.3
CDKN1A-201ENST00000244741 TMEM94Q12767 1356 aa23.16■■□□□ 1.3
CDKN1A-201ENST00000244741 CNGB1Q14028 1251 aaPredicted RBP23.15■■□□□ 1.3
CDKN1A-201ENST00000244741 SLC12A5Q9H2X9 1139 aa23.14■■□□□ 1.3
CDKN1A-201ENST00000244741 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
CDKN1A-201ENST00000244741 NALCNQ8IZF0 1738 aa23.12■■□□□ 1.29
CDKN1A-201ENST00000244741 PRR36Q9H6K5 1346 aa23.11■■□□□ 1.29
CDKN1A-201ENST00000244741 NUDT16Q96DE0 195 aaKnown RBP23.1■■□□□ 1.29
CDKN1A-201ENST00000244741 PANK3Q9H999 370 aa23.1■■□□□ 1.29
CDKN1A-201ENST00000244741 FKBP8Q14318 412 aa23.09■■□□□ 1.29
CDKN1A-201ENST00000244741 CABP1Q9NZU7 370 aa23.09■■□□□ 1.29
CDKN1A-201ENST00000244741 ADGRL3Q9HAR2 1447 aa23.08■■□□□ 1.29
CDKN1A-201ENST00000244741 MYOM1P52179 1685 aa23.07■■□□□ 1.28
CDKN1A-201ENST00000244741 LRRC7Q96NW7 1537 aa23.07■■□□□ 1.28
CDKN1A-201ENST00000244741 ADGRB2O60241 1585 aa23.07■■□□□ 1.28
CDKN1A-201ENST00000244741 C19orf44Q9H6X5 657 aa23.06■■□□□ 1.28
CDKN1A-201ENST00000244741 ATAD2Q6PL18 1390 aa23.05■■□□□ 1.28
CDKN1A-201ENST00000244741 CCDC184Q52MB2 194 aa23.03■■□□□ 1.28
CDKN1A-201ENST00000244741 PMFBP1Q8TBY8 1022 aa23.03■■□□□ 1.28
CDKN1A-201ENST00000244741 PRKRIP1Q9H875 184 aaPredicted RBP23.03■■□□□ 1.28
CDKN1A-201ENST00000244741 CCDC61Q9Y6R9 512 aa23.03■■□□□ 1.28
CDKN1A-201ENST00000244741 ATP7BP35670 1465 aa23.03■■□□□ 1.28
CDKN1A-201ENST00000244741 HNRNPUQ00839 825 aaKnown RBP eCLIP23.03■■□□□ 1.28
CDKN1A-201ENST00000244741 PUS7Q96PZ0 661 aaKnown RBP23.03■■□□□ 1.28
CDKN1A-201ENST00000244741 PPIP5K1Q6PFW1 1433 aa23.03■■□□□ 1.28
CDKN1A-201ENST00000244741 XIRP1Q702N8 1843 aaKnown RBP23.02■■□□□ 1.28
CDKN1A-201ENST00000244741 RGPD8O14715 1765 aaPredicted RBP23.02■■□□□ 1.28
CDKN1A-201ENST00000244741 ATF3P18847 181 aa23.01■■□□□ 1.27
CDKN1A-201ENST00000244741 CARD14Q9BXL6 1004 aa23.01■■□□□ 1.27
CDKN1A-201ENST00000244741 USP32Q8NFA0 1604 aa23■■□□□ 1.27
CDKN1A-201ENST00000244741 MSH6P52701 1360 aa22.99■■□□□ 1.27
CDKN1A-201ENST00000244741 CDC42BPGQ6DT37 1551 aa22.99■■□□□ 1.27
CDKN1A-201ENST00000244741 FMN2Q9NZ56 1722 aa22.98■■□□□ 1.27
CDKN1A-201ENST00000244741 ESCO1Q5FWF5 840 aa22.98■■□□□ 1.27
CDKN1A-201ENST00000244741 PER1O15534 1290 aaPredicted RBP22.97■■□□□ 1.27
CDKN1A-201ENST00000244741 NEFLP07196 543 aa22.97■■□□□ 1.27
CDKN1A-201ENST00000244741 ORAI2Q96SN7 254 aa22.97■■□□□ 1.27
CDKN1A-201ENST00000244741 A0A1W2PP64 1363 aa22.97■■□□□ 1.27
CDKN1A-201ENST00000244741 LTBP4Q8N2S1 1624 aa22.97■■□□□ 1.27
CDKN1A-201ENST00000244741 CD163L1Q9NR16 1453 aa22.95■■□□□ 1.27
CDKN1A-201ENST00000244741 ACEP12821 1306 aa22.95■■□□□ 1.26
CDKN1A-201ENST00000244741 NCOA3Q9Y6Q9 1424 aa22.95■■□□□ 1.26
CDKN1A-201ENST00000244741 CC2D1BQ5T0F9 858 aaKnown RBP22.94■■□□□ 1.26
CDKN1A-201ENST00000244741 TERF2IPQ9NYB0 399 aa22.94■■□□□ 1.26
CDKN1A-201ENST00000244741 KNSTRNQ9Y448 316 aa22.94■■□□□ 1.26
CDKN1A-201ENST00000244741 ANKRD36BQ8N2N9 1353 aa22.94■■□□□ 1.26
CDKN1A-201ENST00000244741 CADPS2Q86UW7 1296 aa22.94■■□□□ 1.26
CDKN1A-201ENST00000244741 HDGFL2Q7Z4V5 671 aaPredicted RBP22.93■■□□□ 1.26
CDKN1A-201ENST00000244741 NGDNQ8NEJ9 315 aaKnown RBP22.93■■□□□ 1.26
CDKN1A-201ENST00000244741 NSD3Q9BZ95 1437 aa22.93■■□□□ 1.26
CDKN1A-201ENST00000244741 NINLQ9Y2I6 1382 aa22.92■■□□□ 1.26
CDKN1A-201ENST00000244741 ANKARQ7Z5J8 1434 aa22.92■■□□□ 1.26
CDKN1A-201ENST00000244741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.91■■□□□ 1.26
CDKN1A-201ENST00000244741 PLEKHG3A1L390 1219 aa22.91■■□□□ 1.26
CDKN1A-201ENST00000244741 MRS2Q9HD23 443 aa22.91■■□□□ 1.26
CDKN1A-201ENST00000244741 TSHZ2Q9NRE2 1034 aa22.91■■□□□ 1.26
CDKN1A-201ENST00000244741 PHF8Q9UPP1 1060 aa22.91■■□□□ 1.26
CDKN1A-201ENST00000244741 TOPAZ1Q8N9V7 1692 aa22.9■■□□□ 1.26
CDKN1A-201ENST00000244741 C1orf167Q5SNV9 1468 aa22.9■■□□□ 1.26
CDKN1A-201ENST00000244741 KTN1Q86UP2 1357 aaKnown RBP22.9■■□□□ 1.26
CDKN1A-201ENST00000244741 MST1RQ04912 1400 aa22.9■■□□□ 1.26
CDKN1A-201ENST00000244741 XPCQ01831 940 aaPredicted RBP22.89■■□□□ 1.26
CDKN1A-201ENST00000244741 DDX17Q92841 729 aaKnown RBP22.89■■□□□ 1.25
CDKN1A-201ENST00000244741 FOXO3O43524 673 aa22.88■■□□□ 1.25
CDKN1A-201ENST00000244741 FAM9BQ8IZU0 186 aa22.88■■□□□ 1.25
CDKN1A-201ENST00000244741 DCCP43146 1447 aa22.88■■□□□ 1.25
CDKN1A-201ENST00000244741 SLAIN2Q9P270 581 aa22.87■■□□□ 1.25
CDKN1A-201ENST00000244741 CPSF1Q10570 1443 aaKnown RBP22.87■■□□□ 1.25
CDKN1A-201ENST00000244741 AMER1Q5JTC6 1135 aaPredicted RBP22.87■■□□□ 1.25
CDKN1A-201ENST00000244741 ITSN1Q15811 1721 aa22.86■■□□□ 1.25
CDKN1A-201ENST00000244741 GGNBP2Q9H3C7 697 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms