RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 NGEFQ8N5V2 710 aa28.86■■■□□ 2.21
RNF39-201ENST00000244360 TSPOAP1O95153 1857 aa28.85■■■□□ 2.21
RNF39-201ENST00000244360 SHPRHQ149N8 1683 aa28.84■■■□□ 2.21
RNF39-201ENST00000244360 PTPRMP28827 1452 aa28.84■■■□□ 2.21
RNF39-201ENST00000244360 TRMT2AQ8IZ69 625 aaKnown RBP28.84■■■□□ 2.21
RNF39-201ENST00000244360 SLFN5Q08AF3 891 aa28.83■■■□□ 2.21
RNF39-201ENST00000244360 MORC1Q86VD1 984 aa28.83■■■□□ 2.21
RNF39-201ENST00000244360 NSD2O96028 1365 aa28.83■■■□□ 2.21
RNF39-201ENST00000244360 CGNL1Q0VF96 1302 aa28.82■■■□□ 2.2
RNF39-201ENST00000244360 NINLQ9Y2I6 1382 aa28.82■■■□□ 2.2
RNF39-201ENST00000244360 FBXO31Q5XUX0 539 aaPredicted RBP28.82■■■□□ 2.2
RNF39-201ENST00000244360 CCDC146Q8IYE0 955 aa28.82■■■□□ 2.2
RNF39-201ENST00000244360 APAF1O14727 1248 aa28.79■■■□□ 2.2
RNF39-201ENST00000244360 SPATA31D1Q6ZQQ2 1576 aa28.79■■■□□ 2.2
RNF39-201ENST00000244360 NOP58Q9Y2X3 529 aaKnown RBP28.78■■■□□ 2.2
RNF39-201ENST00000244360 CLTCQ00610 1675 aaKnown RBP28.78■■■□□ 2.2
RNF39-201ENST00000244360 YTHDC2Q9H6S0 1430 aaKnown RBP28.78■■■□□ 2.2
RNF39-201ENST00000244360 PLIN1O60240 522 aa28.78■■■□□ 2.2
RNF39-201ENST00000244360 ALKQ9UM73 1620 aa28.77■■■□□ 2.2
RNF39-201ENST00000244360 ANP32AP39687 249 aaKnown RBP28.75■■■□□ 2.19
RNF39-201ENST00000244360 ARHGEF40Q8TER5 1519 aa28.75■■■□□ 2.19
RNF39-201ENST00000244360 CABP2Q9NPB3 220 aa28.74■■■□□ 2.19
RNF39-201ENST00000244360 CRBNQ96SW2 442 aa28.73■■■□□ 2.19
RNF39-201ENST00000244360 NKTRP30414 1462 aaKnown RBP28.72■■■□□ 2.19
RNF39-201ENST00000244360 A2ML1A8K2U0 1454 aa28.72■■■□□ 2.19
RNF39-201ENST00000244360 STK26Q9P289 416 aa28.71■■■□□ 2.19
RNF39-201ENST00000244360 ABCC11Q96J66 1382 aa28.71■■■□□ 2.19
RNF39-201ENST00000244360 IQSEC2Q5JU85 1478 aa28.71■■■□□ 2.19
RNF39-201ENST00000244360 ATAD2Q6PL18 1390 aa28.71■■■□□ 2.19
RNF39-201ENST00000244360 E9PSI1 815 aa28.71■■■□□ 2.19
RNF39-201ENST00000244360 SPINK5Q9NQ38 1064 aaPredicted RBP28.7■■■□□ 2.18
RNF39-201ENST00000244360 TCERG1O14776 1098 aaKnown RBP28.69■■■□□ 2.18
RNF39-201ENST00000244360 A0A1W2PP64 1363 aa28.69■■■□□ 2.18
RNF39-201ENST00000244360 SAFB2Q14151 953 aaKnown RBP eCLIP28.67■■■□□ 2.18
RNF39-201ENST00000244360 IPO9Q96P70 1041 aaKnown RBP28.67■■■□□ 2.18
RNF39-201ENST00000244360 DLC1Q96QB1 1528 aa28.67■■■□□ 2.18
RNF39-201ENST00000244360 PRAM1Q96QH2 718 aa28.67■■■□□ 2.18
RNF39-201ENST00000244360 KIF13AQ9H1H9 1805 aa28.66■■■□□ 2.18
RNF39-201ENST00000244360 TNNT2P45379 298 aaPredicted RBP28.66■■■□□ 2.18
RNF39-201ENST00000244360 MTHFSP49914 203 aa28.66■■■□□ 2.18
RNF39-201ENST00000244360 C20orf194Q5TEA3 1177 aa28.66■■■□□ 2.18
RNF39-201ENST00000244360 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.65■■■□□ 2.18
RNF39-201ENST00000244360 CFAP53Q96M91 514 aa28.65■■■□□ 2.18
RNF39-201ENST00000244360 SETD1AO15047 1707 aaKnown RBP28.65■■■□□ 2.18
RNF39-201ENST00000244360 RUNDC1Q96C34 613 aa28.65■■■□□ 2.18
RNF39-201ENST00000244360 CD163L1Q9NR16 1453 aa28.65■■■□□ 2.18
RNF39-201ENST00000244360 MED14O60244 1454 aa28.64■■■□□ 2.18
RNF39-201ENST00000244360 SRPK2P78362 688 aaKnown RBP28.64■■■□□ 2.18
RNF39-201ENST00000244360 STAG3Q9UJ98 1225 aa28.64■■■□□ 2.18
RNF39-201ENST00000244360 RIMS2Q9UQ26 1411 aa28.63■■■□□ 2.17
RNF39-201ENST00000244360 WWC1Q8IX03 1113 aa28.63■■■□□ 2.17
RNF39-201ENST00000244360 DMRT2Q9Y5R5 561 aa28.63■■■□□ 2.17
RNF39-201ENST00000244360 PHF23Q9BUL5 403 aaPredicted RBP28.62■■■□□ 2.17
RNF39-201ENST00000244360 ANKRD26Q9UPS8 1709 aa28.62■■■□□ 2.17
RNF39-201ENST00000244360 MINK1Q8N4C8 1332 aaPredicted RBP28.62■■■□□ 2.17
RNF39-201ENST00000244360 POGKQ9P215 609 aa28.62■■■□□ 2.17
RNF39-201ENST00000244360 MS4A1P11836 297 aa28.61■■■□□ 2.17
RNF39-201ENST00000244360 NLRP1Q9C000 1473 aa28.61■■■□□ 2.17
RNF39-201ENST00000244360 NCBP3Q53F19 620 aaKnown RBP28.6■■■□□ 2.17
RNF39-201ENST00000244360 TERF2IPQ9NYB0 399 aa28.59■■■□□ 2.17
RNF39-201ENST00000244360 SENP3Q9H4L4 574 aaPredicted RBP28.58■■■□□ 2.17
RNF39-201ENST00000244360 BCL11AQ9H165 835 aa28.57■■■□□ 2.16
RNF39-201ENST00000244360 CCDC27Q2M243 656 aa28.55■■■□□ 2.16
RNF39-201ENST00000244360 TCP11L2Q8N4U5 519 aa28.55■■■□□ 2.16
RNF39-201ENST00000244360 ADGRB2O60241 1585 aa28.55■■■□□ 2.16
RNF39-201ENST00000244360 ZBTB47Q9UFB7 747 aaPredicted RBP28.55■■■□□ 2.16
RNF39-201ENST00000244360 KDM2BQ8NHM5 1336 aa28.55■■■□□ 2.16
RNF39-201ENST00000244360 COL3A1P02461 1466 aaPredicted RBP28.55■■■□□ 2.16
RNF39-201ENST00000244360 NRXN3Q9Y4C0 1643 aa28.55■■■□□ 2.16
RNF39-201ENST00000244360 PAK3O75914 559 aaPredicted RBP28.53■■■□□ 2.16
RNF39-201ENST00000244360 CDK19Q9BWU1 502 aa28.53■■■□□ 2.16
RNF39-201ENST00000244360 WDR63Q8IWG1 891 aa28.52■■■□□ 2.16
RNF39-201ENST00000244360 MLECQ14165 292 aa28.51■■■□□ 2.16
RNF39-201ENST00000244360 FYB1O15117 783 aa28.51■■■□□ 2.15
RNF39-201ENST00000244360 ZMYM3Q14202 1370 aa28.5■■■□□ 2.15
RNF39-201ENST00000244360 GGNBP2Q9H3C7 697 aa28.49■■■□□ 2.15
RNF39-201ENST00000244360 ATP7BP35670 1465 aa28.49■■■□□ 2.15
RNF39-201ENST00000244360 BCAR3O75815 825 aa28.49■■■□□ 2.15
RNF39-201ENST00000244360 HDGFL2Q7Z4V5 671 aaPredicted RBP28.49■■■□□ 2.15
RNF39-201ENST00000244360 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.48■■■□□ 2.15
RNF39-201ENST00000244360 KIF20BQ96Q89 1820 aa28.48■■■□□ 2.15
RNF39-201ENST00000244360 CENPQQ7L2Z9 268 aaPredicted RBP28.47■■■□□ 2.15
RNF39-201ENST00000244360 PDE4AP27815 886 aa28.47■■■□□ 2.15
RNF39-201ENST00000244360 RRP7AQ9Y3A4 280 aaKnown RBP28.47■■■□□ 2.15
RNF39-201ENST00000244360 BACH2Q9BYV9 841 aa28.46■■■□□ 2.15
RNF39-201ENST00000244360 U2AF1L5P0DN76 240 aaPredicted RBP28.45■■■□□ 2.15
RNF39-201ENST00000244360 U2AF1Q01081 240 aaKnown RBP eCLIP28.45■■■□□ 2.15
RNF39-201ENST00000244360 CABP1Q9NZU7 370 aa28.44■■■□□ 2.14
RNF39-201ENST00000244360 PDE3AQ14432 1141 aa28.43■■■□□ 2.14
RNF39-201ENST00000244360 KNDC1Q76NI1 1749 aa28.43■■■□□ 2.14
RNF39-201ENST00000244360 NEUROD2Q15784 382 aa28.43■■■□□ 2.14
RNF39-201ENST00000244360 PNPLA6Q8IY17 1366 aa28.43■■■□□ 2.14
RNF39-201ENST00000244360 WAPLQ7Z5K2 1190 aa28.42■■■□□ 2.14
RNF39-201ENST00000244360 ESF1Q9H501 851 aaKnown RBP28.41■■■□□ 2.14
RNF39-201ENST00000244360 TECPR2O15040 1411 aa28.41■■■□□ 2.14
RNF39-201ENST00000244360 METP08581 1390 aa28.4■■■□□ 2.14
RNF39-201ENST00000244360 TNRQ92752 1358 aa28.4■■■□□ 2.14
RNF39-201ENST00000244360 PLEKHF1Q96S99 279 aa28.39■■■□□ 2.14
RNF39-201ENST00000244360 FAM135BQ49AJ0 1406 aa28.39■■■□□ 2.14
RNF39-201ENST00000244360 SIRT1Q96EB6 747 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms