RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SPINK5Q9NQ38 1064 aaPredicted RBP18.83■□□□□ 0.61
HIF3A-202ENST00000244303 ADGRB1O14514 1584 aa18.83■□□□□ 0.6
HIF3A-202ENST00000244303 KDM2BQ8NHM5 1336 aa18.82■□□□□ 0.6
HIF3A-202ENST00000244303 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.82■□□□□ 0.6
HIF3A-202ENST00000244303 NKTRP30414 1462 aaKnown RBP18.82■□□□□ 0.6
HIF3A-202ENST00000244303 VGFO15240 615 aaPredicted RBP18.81■□□□□ 0.6
HIF3A-202ENST00000244303 NUTM2DQ5VT03 806 aaPredicted RBP18.81■□□□□ 0.6
HIF3A-202ENST00000244303 SHPRHQ149N8 1683 aa18.8■□□□□ 0.6
HIF3A-202ENST00000244303 NSD3Q9BZ95 1437 aa18.8■□□□□ 0.6
HIF3A-202ENST00000244303 SLC52A1Q9NWF4 448 aa18.8■□□□□ 0.6
HIF3A-202ENST00000244303 NEXMIFQ5QGS0 1516 aa18.79■□□□□ 0.6
HIF3A-202ENST00000244303 POLR3AO14802 1390 aaPredicted RBP18.79■□□□□ 0.6
HIF3A-202ENST00000244303 CENPQQ7L2Z9 268 aaPredicted RBP18.78■□□□□ 0.6
HIF3A-202ENST00000244303 TSPOAP1O95153 1857 aa18.78■□□□□ 0.6
HIF3A-202ENST00000244303 E9PSI1 815 aa18.77■□□□□ 0.6
HIF3A-202ENST00000244303 DMRT2Q9Y5R5 561 aa18.77■□□□□ 0.6
HIF3A-202ENST00000244303 SLC12A5Q9H2X9 1139 aa18.76■□□□□ 0.59
HIF3A-202ENST00000244303 PREX1Q8TCU6 1659 aa18.75■□□□□ 0.59
HIF3A-202ENST00000244303 BCAR3O75815 825 aa18.75■□□□□ 0.59
HIF3A-202ENST00000244303 USP32Q8NFA0 1604 aa18.75■□□□□ 0.59
HIF3A-202ENST00000244303 ARHGEF28Q8N1W1 1705 aaKnown RBP18.74■□□□□ 0.59
HIF3A-202ENST00000244303 MORC1Q86VD1 984 aa18.74■□□□□ 0.59
HIF3A-202ENST00000244303 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
HIF3A-202ENST00000244303 FBXO31Q5XUX0 539 aaPredicted RBP18.74■□□□□ 0.59
HIF3A-202ENST00000244303 ZFYVE9O95405 1425 aa18.73■□□□□ 0.59
HIF3A-202ENST00000244303 TNNT2P45379 298 aaPredicted RBP18.73■□□□□ 0.59
HIF3A-202ENST00000244303 RTL5Q5HYW3 569 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-202ENST00000244303 WWC1Q8IX03 1113 aa18.71■□□□□ 0.59
HIF3A-202ENST00000244303 TMEM131LA2VDJ0 1609 aa18.71■□□□□ 0.59
HIF3A-202ENST00000244303 REREQ9P2R6 1566 aa18.7■□□□□ 0.58
HIF3A-202ENST00000244303 MYO5BQ9ULV0 1848 aa18.7■□□□□ 0.58
HIF3A-202ENST00000244303 AGLP35573 1532 aa18.69■□□□□ 0.58
HIF3A-202ENST00000244303 TULP4Q9NRJ4 1543 aa18.69■□□□□ 0.58
HIF3A-202ENST00000244303 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
HIF3A-202ENST00000244303 EVC2Q86UK5 1308 aa18.68■□□□□ 0.58
HIF3A-202ENST00000244303 IQSEC2Q5JU85 1478 aa18.68■□□□□ 0.58
HIF3A-202ENST00000244303 PUS7Q96PZ0 661 aaKnown RBP18.67■□□□□ 0.58
HIF3A-202ENST00000244303 CGNL1Q0VF96 1302 aa18.67■□□□□ 0.58
HIF3A-202ENST00000244303 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
HIF3A-202ENST00000244303 NEUROD2Q15784 382 aa18.66■□□□□ 0.58
HIF3A-202ENST00000244303 RUNDC1Q96C34 613 aa18.66■□□□□ 0.58
HIF3A-202ENST00000244303 RRP7AQ9Y3A4 280 aaKnown RBP18.66■□□□□ 0.58
HIF3A-202ENST00000244303 MTHFSP49914 203 aa18.65■□□□□ 0.58
HIF3A-202ENST00000244303 STK26Q9P289 416 aa18.65■□□□□ 0.58
HIF3A-202ENST00000244303 FAM161AQ3B820 660 aa18.64■□□□□ 0.57
HIF3A-202ENST00000244303 TCP11L2Q8N4U5 519 aa18.64■□□□□ 0.57
HIF3A-202ENST00000244303 ANKRD36BQ8N2N9 1353 aa18.64■□□□□ 0.57
HIF3A-202ENST00000244303 RGS3P49796 1198 aa18.63■□□□□ 0.57
HIF3A-202ENST00000244303 C8orf34Q49A92 452 aa18.63■□□□□ 0.57
HIF3A-202ENST00000244303 DDRGK1Q96HY6 314 aa18.63■□□□□ 0.57
HIF3A-202ENST00000244303 LAS1LQ9Y4W2 734 aaKnown RBP18.63■□□□□ 0.57
HIF3A-202ENST00000244303 SAFB2Q14151 953 aaKnown RBP eCLIP18.63■□□□□ 0.57
HIF3A-202ENST00000244303 PDE3AQ14432 1141 aa18.63■□□□□ 0.57
HIF3A-202ENST00000244303 STAG3Q9UJ98 1225 aa18.63■□□□□ 0.57
HIF3A-202ENST00000244303 NINLQ9Y2I6 1382 aa18.62■□□□□ 0.57
HIF3A-202ENST00000244303 MLECQ14165 292 aa18.62■□□□□ 0.57
HIF3A-202ENST00000244303 CABP2Q9NPB3 220 aa18.62■□□□□ 0.57
HIF3A-202ENST00000244303 CLTCQ00610 1675 aaKnown RBP18.62■□□□□ 0.57
HIF3A-202ENST00000244303 VIRMAQ69YN4 1812 aaKnown RBP18.61■□□□□ 0.57
HIF3A-202ENST00000244303 CANXP27824 592 aaKnown RBP18.61■□□□□ 0.57
HIF3A-202ENST00000244303 CFAP53Q96M91 514 aa18.61■□□□□ 0.57
HIF3A-202ENST00000244303 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
HIF3A-202ENST00000244303 IGHDP01880 384 aa18.6■□□□□ 0.57
HIF3A-202ENST00000244303 PANK1Q8TE04 598 aa18.6■□□□□ 0.57
HIF3A-202ENST00000244303 NSD2O96028 1365 aa18.6■□□□□ 0.57
HIF3A-202ENST00000244303 COG6Q9Y2V7 657 aa18.59■□□□□ 0.57
HIF3A-202ENST00000244303 KIF13AQ9H1H9 1805 aa18.59■□□□□ 0.57
HIF3A-202ENST00000244303 YTHDC2Q9H6S0 1430 aaKnown RBP18.58■□□□□ 0.57
HIF3A-202ENST00000244303 PTPRMP28827 1452 aa18.58■□□□□ 0.56
HIF3A-202ENST00000244303 WDR63Q8IWG1 891 aa18.58■□□□□ 0.56
HIF3A-202ENST00000244303 FRAT1Q92837 279 aaPredicted RBP18.58■□□□□ 0.56
HIF3A-202ENST00000244303 SPATA31D1Q6ZQQ2 1576 aa18.57■□□□□ 0.56
HIF3A-202ENST00000244303 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
HIF3A-202ENST00000244303 CLUAP1Q96AJ1 413 aa18.57■□□□□ 0.56
HIF3A-202ENST00000244303 ALKQ9UM73 1620 aa18.57■□□□□ 0.56
HIF3A-202ENST00000244303 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
HIF3A-202ENST00000244303 NEFMP07197 916 aa18.56■□□□□ 0.56
HIF3A-202ENST00000244303 A0A1W2PP64 1363 aa18.56■□□□□ 0.56
HIF3A-202ENST00000244303 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
HIF3A-202ENST00000244303 CCDC27Q2M243 656 aa18.56■□□□□ 0.56
HIF3A-202ENST00000244303 POGKQ9P215 609 aa18.56■□□□□ 0.56
HIF3A-202ENST00000244303 ADGRB2O60241 1585 aa18.56■□□□□ 0.56
HIF3A-202ENST00000244303 ARHGEF40Q8TER5 1519 aa18.56■□□□□ 0.56
HIF3A-202ENST00000244303 A2ML1A8K2U0 1454 aa18.55■□□□□ 0.56
HIF3A-202ENST00000244303 MINK1Q8N4C8 1332 aaPredicted RBP18.55■□□□□ 0.56
HIF3A-202ENST00000244303 PPM1GO15355 546 aaPredicted RBP18.54■□□□□ 0.56
HIF3A-202ENST00000244303 U2AF1L5P0DN76 240 aaPredicted RBP18.54■□□□□ 0.56
HIF3A-202ENST00000244303 U2AF1Q01081 240 aaKnown RBP eCLIP18.54■□□□□ 0.56
HIF3A-202ENST00000244303 ANKRD26Q9UPS8 1709 aa18.54■□□□□ 0.56
HIF3A-202ENST00000244303 ABCC11Q96J66 1382 aa18.54■□□□□ 0.56
HIF3A-202ENST00000244303 SLC4A3P48751 1232 aa18.53■□□□□ 0.56
HIF3A-202ENST00000244303 RIMS2Q9UQ26 1411 aa18.52■□□□□ 0.56
HIF3A-202ENST00000244303 BCL2L13Q9BXK5 485 aa18.52■□□□□ 0.56
HIF3A-202ENST00000244303 USP35Q9P2H5 1018 aa18.52■□□□□ 0.56
HIF3A-202ENST00000244303 TNNQ9UQP3 1299 aa18.52■□□□□ 0.55
HIF3A-202ENST00000244303 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
HIF3A-202ENST00000244303 ESF1Q9H501 851 aaKnown RBP18.51■□□□□ 0.55
HIF3A-202ENST00000244303 ZMYM3Q14202 1370 aa18.5■□□□□ 0.55
HIF3A-202ENST00000244303 RLBP1P12271 317 aa18.5■□□□□ 0.55
HIF3A-202ENST00000244303 GGNBP2Q9H3C7 697 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms