RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 SPHKAPQ2M3C7 1700 aa23.67■■□□□ 1.38
CHPF-201ENST00000243776 PTPRTO14522 1441 aa23.66■■□□□ 1.38
CHPF-201ENST00000243776 POLR3AO14802 1390 aaPredicted RBP23.66■■□□□ 1.38
CHPF-201ENST00000243776 U2SURPO15042 1029 aaKnown RBP23.66■■□□□ 1.38
CHPF-201ENST00000243776 NLRP1Q9C000 1473 aa23.65■■□□□ 1.38
CHPF-201ENST00000243776 RRAGDQ9NQL2 400 aaPredicted RBP23.64■■□□□ 1.38
CHPF-201ENST00000243776 CEP152O94986 1710 aa23.63■■□□□ 1.37
CHPF-201ENST00000243776 STAC3Q96MF2 364 aa23.63■■□□□ 1.37
CHPF-201ENST00000243776 ABCC1P33527 1531 aa23.63■■□□□ 1.37
CHPF-201ENST00000243776 ITPRIPQ8IWB1 547 aa23.62■■□□□ 1.37
CHPF-201ENST00000243776 SMC4Q9NTJ3 1288 aa23.62■■□□□ 1.37
CHPF-201ENST00000243776 FAM43AQ8N2R8 423 aa23.62■■□□□ 1.37
CHPF-201ENST00000243776 CFAP65Q6ZU64 1925 aaKnown RBP23.62■■□□□ 1.37
CHPF-201ENST00000243776 PANK2Q9BZ23 570 aa23.62■■□□□ 1.37
CHPF-201ENST00000243776 EXOSC9Q06265 439 aaKnown RBP23.61■■□□□ 1.37
CHPF-201ENST00000243776 MVPQ14764 893 aaKnown RBP23.61■■□□□ 1.37
CHPF-201ENST00000243776 NOS1P29475 1434 aa23.61■■□□□ 1.37
CHPF-201ENST00000243776 GGT6Q6P531 493 aa23.61■■□□□ 1.37
CHPF-201ENST00000243776 CFAP53Q96M91 514 aa23.61■■□□□ 1.37
CHPF-201ENST00000243776 CABP2Q9NPB3 220 aa23.61■■□□□ 1.37
CHPF-201ENST00000243776 DZIP1LQ8IYY4 767 aaKnown RBP23.6■■□□□ 1.37
CHPF-201ENST00000243776 NGEFQ8N5V2 710 aa23.6■■□□□ 1.37
CHPF-201ENST00000243776 CHD1O14646 1710 aa23.6■■□□□ 1.37
CHPF-201ENST00000243776 ZKSCAN2Q63HK3 967 aa23.59■■□□□ 1.37
CHPF-201ENST00000243776 WDR63Q8IWG1 891 aa23.59■■□□□ 1.37
CHPF-201ENST00000243776 C22orf23Q9BZE7 217 aa23.59■■□□□ 1.37
CHPF-201ENST00000243776 MYH16Q9H6N6 1097 aa23.58■■□□□ 1.37
CHPF-201ENST00000243776 NINLQ9Y2I6 1382 aa23.58■■□□□ 1.36
CHPF-201ENST00000243776 ABCA6Q8N139 1617 aa23.57■■□□□ 1.36
CHPF-201ENST00000243776 STK26Q9P289 416 aa23.57■■□□□ 1.36
CHPF-201ENST00000243776 XRCC6P12956 609 aaKnown RBP eCLIP23.56■■□□□ 1.36
CHPF-201ENST00000243776 GGNBP2Q9H3C7 697 aa23.56■■□□□ 1.36
CHPF-201ENST00000243776 TRIM27P14373 513 aa23.55■■□□□ 1.36
CHPF-201ENST00000243776 MCM4P33991 863 aa23.55■■□□□ 1.36
CHPF-201ENST00000243776 SSH1Q8WYL5 1049 aa23.55■■□□□ 1.36
CHPF-201ENST00000243776 ZFYVE16Q7Z3T8 1539 aa23.55■■□□□ 1.36
CHPF-201ENST00000243776 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
CHPF-201ENST00000243776 SLC24A1O60721 1099 aa23.54■■□□□ 1.36
CHPF-201ENST00000243776 FOXD4L1Q9NU39 408 aa23.54■■□□□ 1.36
CHPF-201ENST00000243776 NOB1Q9ULX3 412 aaKnown RBP23.54■■□□□ 1.36
CHPF-201ENST00000243776 VIRMAQ69YN4 1812 aaKnown RBP23.53■■□□□ 1.36
CHPF-201ENST00000243776 GOLGA6L3A6NEY3 463 aa23.53■■□□□ 1.36
CHPF-201ENST00000243776 ZCCHC11Q5TAX3 1644 aaKnown RBP23.53■■□□□ 1.36
CHPF-201ENST00000243776 L1TD1Q5T7N2 865 aaKnown RBP23.52■■□□□ 1.36
CHPF-201ENST00000243776 MAP3K4Q9Y6R4 1608 aa23.52■■□□□ 1.36
CHPF-201ENST00000243776 LNPKQ9C0E8 428 aa23.51■■□□□ 1.35
CHPF-201ENST00000243776 TMEM57Q8N5G2 664 aa23.5■■□□□ 1.35
CHPF-201ENST00000243776 TRAK2O60296 914 aa23.49■■□□□ 1.35
CHPF-201ENST00000243776 SHPRHQ149N8 1683 aa23.49■■□□□ 1.35
CHPF-201ENST00000243776 FBLN1P23142 703 aa23.49■■□□□ 1.35
CHPF-201ENST00000243776 RTEL1-TNFRSF6BF6WH68 1400 aa23.48■■□□□ 1.35
CHPF-201ENST00000243776 TET3O43151 1660 aa23.48■■□□□ 1.35
CHPF-201ENST00000243776 C14orf93Q9H972 538 aaKnown RBP23.48■■□□□ 1.35
CHPF-201ENST00000243776 FANCAO15360 1455 aa23.47■■□□□ 1.35
CHPF-201ENST00000243776 RSPH6AQ9H0K4 717 aa23.46■■□□□ 1.35
CHPF-201ENST00000243776 IQSEC2Q5JU85 1478 aa23.46■■□□□ 1.35
CHPF-201ENST00000243776 ATP7AQ04656 1500 aa23.46■■□□□ 1.35
CHPF-201ENST00000243776 TMPOP42166 694 aaKnown RBP23.46■■□□□ 1.35
CHPF-201ENST00000243776 SRPK2P78362 688 aaKnown RBP23.46■■□□□ 1.35
CHPF-201ENST00000243776 CHMP5Q9NZZ3 219 aa23.46■■□□□ 1.35
CHPF-201ENST00000243776 ZNF518AQ6AHZ1 1483 aa23.45■■□□□ 1.34
CHPF-201ENST00000243776 HSCBQ8IWL3 235 aa23.45■■□□□ 1.34
CHPF-201ENST00000243776 C1orf115Q9H7X2 142 aa23.45■■□□□ 1.34
CHPF-201ENST00000243776 TRIM35Q9UPQ4 493 aa23.45■■□□□ 1.34
CHPF-201ENST00000243776 ATF7IPQ6VMQ6 1270 aa23.45■■□□□ 1.34
CHPF-201ENST00000243776 RIPK4P57078 832 aa23.44■■□□□ 1.34
CHPF-201ENST00000243776 CCDC27Q2M243 656 aa23.44■■□□□ 1.34
CHPF-201ENST00000243776 MROH2AA6NES4 1674 aa23.42■■□□□ 1.34
CHPF-201ENST00000243776 MYOM2P54296 1465 aa23.42■■□□□ 1.34
CHPF-201ENST00000243776 ELL2O00472 640 aaPredicted RBP23.42■■□□□ 1.34
CHPF-201ENST00000243776 AAMPQ13685 434 aa23.42■■□□□ 1.34
CHPF-201ENST00000243776 ADGRL1O94910 1474 aa23.42■■□□□ 1.34
CHPF-201ENST00000243776 NAP1L5Q96NT1 182 aaPredicted RBP23.42■■□□□ 1.34
CHPF-201ENST00000243776 DDX19BQ9UMR2 479 aa23.42■■□□□ 1.34
CHPF-201ENST00000243776 SHROOM2Q13796 1616 aa23.42■■□□□ 1.34
CHPF-201ENST00000243776 EVC2Q86UK5 1308 aa23.41■■□□□ 1.34
CHPF-201ENST00000243776 THUMPD2Q9BTF0 503 aaKnown RBP23.4■■□□□ 1.34
CHPF-201ENST00000243776 KIF1BO60333 1816 aa23.4■■□□□ 1.34
CHPF-201ENST00000243776 MINK1Q8N4C8 1332 aaPredicted RBP23.39■■□□□ 1.33
CHPF-201ENST00000243776 KIAA1210Q9ULL0 1709 aa23.39■■□□□ 1.33
CHPF-201ENST00000243776 SBNO2Q9Y2G9 1366 aa23.38■■□□□ 1.33
CHPF-201ENST00000243776 CD109Q6YHK3 1445 aa23.38■■□□□ 1.33
CHPF-201ENST00000243776 PLEKHF1Q96S99 279 aa23.38■■□□□ 1.33
CHPF-201ENST00000243776 DEPDC5O75140 1603 aa23.37■■□□□ 1.33
CHPF-201ENST00000243776 FSD2A1L4K1 749 aa23.37■■□□□ 1.33
CHPF-201ENST00000243776 HDAC1Q13547 482 aaPredicted RBP23.37■■□□□ 1.33
CHPF-201ENST00000243776 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
CHPF-201ENST00000243776 ANKRD45Q5TZF3 282 aa23.37■■□□□ 1.33
CHPF-201ENST00000243776 RBM42Q9BTD8 480 aaKnown RBP23.37■■□□□ 1.33
CHPF-201ENST00000243776 HSP90AA1P07900 732 aaKnown RBP23.36■■□□□ 1.33
CHPF-201ENST00000243776 ZBTB40Q9NUA8 1239 aa23.36■■□□□ 1.33
CHPF-201ENST00000243776 SMC5Q8IY18 1101 aa23.35■■□□□ 1.33
CHPF-201ENST00000243776 CD2BP2O95400 341 aaKnown RBP23.34■■□□□ 1.33
CHPF-201ENST00000243776 TNPO1Q92973 898 aaKnown RBP23.34■■□□□ 1.33
CHPF-201ENST00000243776 VWDEQ8N2E2 1590 aa23.34■■□□□ 1.33
CHPF-201ENST00000243776 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.33
CHPF-201ENST00000243776 QRICH2Q9H0J4 1663 aa23.33■■□□□ 1.33
CHPF-201ENST00000243776 ZNF692Q9BU19 519 aaPredicted RBP23.33■■□□□ 1.33
CHPF-201ENST00000243776 PNNQ9H307 717 aaKnown RBP23.33■■□□□ 1.33
CHPF-201ENST00000243776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms