RNA–Protein interactions for RNA: ENST00000242719.3

RNF11-201, Transcript of ring finger protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF11, Length 3,084 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11-201ENST00000242719 NSD3Q9BZ95 1437 aa19.59■□□□□ 0.73
RNF11-201ENST00000242719 PMFBP1Q8TBY8 1022 aa19.59■□□□□ 0.73
RNF11-201ENST00000242719 RUNDC1Q96C34 613 aa19.59■□□□□ 0.73
RNF11-201ENST00000242719 ITPRIPQ8IWB1 547 aa19.57■□□□□ 0.72
RNF11-201ENST00000242719 ATP10AO60312 1499 aa19.57■□□□□ 0.72
RNF11-201ENST00000242719 MADDQ8WXG6 1647 aa19.57■□□□□ 0.72
RNF11-201ENST00000242719 NPM1P06748 294 aaKnown RBP eCLIP19.57■□□□□ 0.72
RNF11-201ENST00000242719 LAMC1P11047 1609 aa19.57■□□□□ 0.72
RNF11-201ENST00000242719 TBC1D32Q96NH3 1257 aa19.56■□□□□ 0.72
RNF11-201ENST00000242719 SMC4Q9NTJ3 1288 aa19.56■□□□□ 0.72
RNF11-201ENST00000242719 FOXD4L1Q9NU39 408 aa19.56■□□□□ 0.72
RNF11-201ENST00000242719 PLCH2O75038 1416 aa19.56■□□□□ 0.72
RNF11-201ENST00000242719 MCM4P33991 863 aa19.56■□□□□ 0.72
RNF11-201ENST00000242719 RWDD1Q9H446 243 aaPredicted RBP19.56■□□□□ 0.72
RNF11-201ENST00000242719 VIRMAQ69YN4 1812 aaKnown RBP19.55■□□□□ 0.72
RNF11-201ENST00000242719 SYNMO15061 1565 aa19.55■□□□□ 0.72
RNF11-201ENST00000242719 ERVK-7P63135 1459 aa19.53■□□□□ 0.72
RNF11-201ENST00000242719 KANK1Q14678 1352 aa19.53■□□□□ 0.72
RNF11-201ENST00000242719 RNF17Q9BXT8 1623 aaKnown RBP19.53■□□□□ 0.72
RNF11-201ENST00000242719 GGT6Q6P531 493 aa19.53■□□□□ 0.72
RNF11-201ENST00000242719 CFAP53Q96M91 514 aa19.52■□□□□ 0.72
RNF11-201ENST00000242719 CFAP65Q6ZU64 1925 aaKnown RBP19.52■□□□□ 0.72
RNF11-201ENST00000242719 TRAK2O60296 914 aa19.52■□□□□ 0.71
RNF11-201ENST00000242719 HSP90AA2PQ14568 343 aaPredicted RBP19.52■□□□□ 0.71
RNF11-201ENST00000242719 C22orf23Q9BZE7 217 aa19.52■□□□□ 0.71
RNF11-201ENST00000242719 EXOSC9Q06265 439 aaKnown RBP19.51■□□□□ 0.71
RNF11-201ENST00000242719 STK26Q9P289 416 aa19.51■□□□□ 0.71
RNF11-201ENST00000242719 SCAPERQ9BY12 1400 aa19.51■□□□□ 0.71
RNF11-201ENST00000242719 FSD2A1L4K1 749 aa19.51■□□□□ 0.71
RNF11-201ENST00000242719 CLTCL1P53675 1640 aa19.51■□□□□ 0.71
RNF11-201ENST00000242719 IQGAP1P46940 1657 aa19.51■□□□□ 0.71
RNF11-201ENST00000242719 DZIP1LQ8IYY4 767 aaKnown RBP19.5■□□□□ 0.71
RNF11-201ENST00000242719 ZMYND15Q9H091 742 aa19.5■□□□□ 0.71
RNF11-201ENST00000242719 HSP90AA1P07900 732 aaKnown RBP19.5■□□□□ 0.71
RNF11-201ENST00000242719 CABP2Q9NPB3 220 aa19.5■□□□□ 0.71
RNF11-201ENST00000242719 ZKSCAN2Q63HK3 967 aa19.5■□□□□ 0.71
RNF11-201ENST00000242719 MVPQ14764 893 aaKnown RBP19.49■□□□□ 0.71
RNF11-201ENST00000242719 CLCN1P35523 988 aa19.49■□□□□ 0.71
RNF11-201ENST00000242719 GLIPR1L2Q4G1C9 344 aa19.48■□□□□ 0.71
RNF11-201ENST00000242719 GGNBP2Q9H3C7 697 aa19.48■□□□□ 0.71
RNF11-201ENST00000242719 MYOM1P52179 1685 aa19.48■□□□□ 0.71
RNF11-201ENST00000242719 ERBB4Q15303 1308 aa19.48■□□□□ 0.71
RNF11-201ENST00000242719 KDM5AP29375 1690 aaKnown RBP19.48■□□□□ 0.71
RNF11-201ENST00000242719 LNPKQ9C0E8 428 aa19.48■□□□□ 0.71
RNF11-201ENST00000242719 MYH16Q9H6N6 1097 aa19.48■□□□□ 0.71
RNF11-201ENST00000242719 FANCAO15360 1455 aa19.47■□□□□ 0.71
RNF11-201ENST00000242719 PLXNC1O60486 1568 aa19.47■□□□□ 0.71
RNF11-201ENST00000242719 NPC1L1Q9UHC9 1359 aa19.47■□□□□ 0.71
RNF11-201ENST00000242719 RAPGEF3O95398 923 aa19.46■□□□□ 0.71
RNF11-201ENST00000242719 POLR3AO14802 1390 aaPredicted RBP19.45■□□□□ 0.7
RNF11-201ENST00000242719 NOS1P29475 1434 aa19.45■□□□□ 0.7
RNF11-201ENST00000242719 RIMBP3CA6NJZ7 1639 aa19.45■□□□□ 0.7
RNF11-201ENST00000242719 RIMBP3BA6NNM3 1639 aa19.45■□□□□ 0.7
RNF11-201ENST00000242719 RIMBP3Q9UFD9 1639 aa19.45■□□□□ 0.7
RNF11-201ENST00000242719 TRIM27P14373 513 aa19.45■□□□□ 0.7
RNF11-201ENST00000242719 SSH1Q8WYL5 1049 aa19.45■□□□□ 0.7
RNF11-201ENST00000242719 HSCBQ8IWL3 235 aa19.44■□□□□ 0.7
RNF11-201ENST00000242719 NOB1Q9ULX3 412 aaKnown RBP19.44■□□□□ 0.7
RNF11-201ENST00000242719 C1orf115Q9H7X2 142 aa19.43■□□□□ 0.7
RNF11-201ENST00000242719 TRPM2O94759 1503 aa19.43■□□□□ 0.7
RNF11-201ENST00000242719 GRPEL1Q9HAV7 217 aa19.43■□□□□ 0.7
RNF11-201ENST00000242719 CHMP5Q9NZZ3 219 aa19.43■□□□□ 0.7
RNF11-201ENST00000242719 ELL2O00472 640 aaPredicted RBP19.43■□□□□ 0.7
RNF11-201ENST00000242719 FBLN1P23142 703 aa19.43■□□□□ 0.7
RNF11-201ENST00000242719 WDR63Q8IWG1 891 aa19.43■□□□□ 0.7
RNF11-201ENST00000242719 SRPK2P78362 688 aaKnown RBP19.42■□□□□ 0.7
RNF11-201ENST00000242719 TMEM57Q8N5G2 664 aa19.42■□□□□ 0.7
RNF11-201ENST00000242719 ABCC1P33527 1531 aa19.42■□□□□ 0.7
RNF11-201ENST00000242719 NINLQ9Y2I6 1382 aa19.41■□□□□ 0.7
RNF11-201ENST00000242719 ESPNB1AK53 854 aa19.41■□□□□ 0.7
RNF11-201ENST00000242719 MRE11P49959 708 aa19.41■□□□□ 0.7
RNF11-201ENST00000242719 SPHKAPQ2M3C7 1700 aa19.41■□□□□ 0.7
RNF11-201ENST00000242719 NGEFQ8N5V2 710 aa19.4■□□□□ 0.7
RNF11-201ENST00000242719 PTPRTO14522 1441 aa19.4■□□□□ 0.7
RNF11-201ENST00000242719 CEP152O94986 1710 aa19.4■□□□□ 0.7
RNF11-201ENST00000242719 CD109Q6YHK3 1445 aa19.4■□□□□ 0.7
RNF11-201ENST00000242719 ADGRL1O94910 1474 aa19.39■□□□□ 0.69
RNF11-201ENST00000242719 GAS2L3Q86XJ1 694 aa19.39■□□□□ 0.69
RNF11-201ENST00000242719 HSP90AB1P08238 724 aaKnown RBP19.38■□□□□ 0.69
RNF11-201ENST00000242719 STAC3Q96MF2 364 aa19.38■□□□□ 0.69
RNF11-201ENST00000242719 RIPK4P57078 832 aa19.37■□□□□ 0.69
RNF11-201ENST00000242719 TRIM44Q96DX7 344 aaPredicted RBP19.37■□□□□ 0.69
RNF11-201ENST00000242719 THUMPD2Q9BTF0 503 aaKnown RBP19.37■□□□□ 0.69
RNF11-201ENST00000242719 ABCA9Q8IUA7 1624 aa19.37■□□□□ 0.69
RNF11-201ENST00000242719 FAM69CQ0P6D2 419 aa19.36■□□□□ 0.69
RNF11-201ENST00000242719 ABCA6Q8N139 1617 aa19.36■□□□□ 0.69
RNF11-201ENST00000242719 RRP9O43818 475 aaKnown RBP19.36■□□□□ 0.69
RNF11-201ENST00000242719 ATF7IPQ6VMQ6 1270 aa19.36■□□□□ 0.69
RNF11-201ENST00000242719 TMPOP42166 694 aaKnown RBP19.36■□□□□ 0.69
RNF11-201ENST00000242719 SLC24A1O60721 1099 aa19.35■□□□□ 0.69
RNF11-201ENST00000242719 MINK1Q8N4C8 1332 aaPredicted RBP19.35■□□□□ 0.69
RNF11-201ENST00000242719 ANKRD45Q5TZF3 282 aa19.35■□□□□ 0.69
RNF11-201ENST00000242719 RTEL1-TNFRSF6BF6WH68 1400 aa19.34■□□□□ 0.69
RNF11-201ENST00000242719 DDX19BQ9UMR2 479 aa19.34■□□□□ 0.69
RNF11-201ENST00000242719 RBM42Q9BTD8 480 aaKnown RBP19.34■□□□□ 0.69
RNF11-201ENST00000242719 ZNF692Q9BU19 519 aaPredicted RBP19.33■□□□□ 0.68
RNF11-201ENST00000242719 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.68
RNF11-201ENST00000242719 TNPO1Q92973 898 aaKnown RBP19.32■□□□□ 0.68
RNF11-201ENST00000242719 ZFYVE16Q7Z3T8 1539 aa19.32■□□□□ 0.68
RNF11-201ENST00000242719 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.683e-6■□□□□ 8.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms