RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 EIF3AQ14152 1382 aaKnown RBP14.3□□□□□ -0.12
HMGCL-201ENST00000235958 KNDC1Q76NI1 1749 aa14.29□□□□□ -0.12
HMGCL-201ENST00000235958 CERKQ8TCT0 537 aa14.29□□□□□ -0.12
HMGCL-201ENST00000235958 TESK2Q96S53 571 aa14.29□□□□□ -0.12
HMGCL-201ENST00000235958 NCOA3Q9Y6Q9 1424 aa14.29□□□□□ -0.12
HMGCL-201ENST00000235958 ARHGEF28Q8N1W1 1705 aaKnown RBP14.28□□□□□ -0.12
HMGCL-201ENST00000235958 XIRP1Q702N8 1843 aaKnown RBP14.27□□□□□ -0.13
HMGCL-201ENST00000235958 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.27□□□□□ -0.13
HMGCL-201ENST00000235958 WASLO00401 505 aaPredicted RBP14.26□□□□□ -0.13
HMGCL-201ENST00000235958 SLC24A1O60721 1099 aa14.26□□□□□ -0.13
HMGCL-201ENST00000235958 ATF3P18847 181 aa14.26□□□□□ -0.13
HMGCL-201ENST00000235958 FBXO41Q8TF61 875 aa14.26□□□□□ -0.13
HMGCL-201ENST00000235958 CDK19Q9BWU1 502 aa14.26□□□□□ -0.13
HMGCL-201ENST00000235958 MSH6P52701 1360 aa14.25□□□□□ -0.13
HMGCL-201ENST00000235958 EVC2Q86UK5 1308 aa14.24□□□□□ -0.13
HMGCL-201ENST00000235958 NUTM2FA1L443 756 aa14.24□□□□□ -0.13
HMGCL-201ENST00000235958 CADPS2Q86UW7 1296 aa14.24□□□□□ -0.13
HMGCL-201ENST00000235958 ADGRL3Q9HAR2 1447 aa14.24□□□□□ -0.13
HMGCL-201ENST00000235958 TMF1P82094 1093 aa14.23□□□□□ -0.13
HMGCL-201ENST00000235958 SLAIN2Q9P270 581 aa14.23□□□□□ -0.13
HMGCL-201ENST00000235958 C11orf95C9JLR9 678 aaPredicted RBP14.22□□□□□ -0.13
HMGCL-201ENST00000235958 SRPK2P78362 688 aaKnown RBP14.22□□□□□ -0.13
HMGCL-201ENST00000235958 CABP2Q9NPB3 220 aa14.22□□□□□ -0.13
HMGCL-201ENST00000235958 QRICH2Q9H0J4 1663 aa14.22□□□□□ -0.13
HMGCL-201ENST00000235958 SBNO2Q9Y2G9 1366 aa14.22□□□□□ -0.13
HMGCL-201ENST00000235958 TOM1O60784 492 aa14.2□□□□□ -0.14
HMGCL-201ENST00000235958 NUDT16Q96DE0 195 aaKnown RBP14.2□□□□□ -0.14
HMGCL-201ENST00000235958 NALCNQ8IZF0 1738 aa14.2□□□□□ -0.14
HMGCL-201ENST00000235958 UBAP1LF5GYI3 381 aa14.19□□□□□ -0.14
HMGCL-201ENST00000235958 PUS7Q96PZ0 661 aaKnown RBP14.19□□□□□ -0.14
HMGCL-201ENST00000235958 CDCA8Q53HL2 280 aa14.18□□□□□ -0.14
HMGCL-201ENST00000235958 CCDC61Q9Y6R9 512 aa14.18□□□□□ -0.14
HMGCL-201ENST00000235958 DISP3Q9P2K9 1392 aa14.18□□□□□ -0.14
HMGCL-201ENST00000235958 PRR36Q9H6K5 1346 aa14.17□□□□□ -0.14
HMGCL-201ENST00000235958 DCCP43146 1447 aa14.17□□□□□ -0.14
HMGCL-201ENST00000235958 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
HMGCL-201ENST00000235958 ORAI2Q96SN7 254 aa14.17□□□□□ -0.14
HMGCL-201ENST00000235958 POLR3GLQ9BT43 218 aa14.17□□□□□ -0.14
HMGCL-201ENST00000235958 IQSEC2Q5JU85 1478 aa14.17□□□□□ -0.14
HMGCL-201ENST00000235958 CABP1Q9NZU7 370 aa14.16□□□□□ -0.14
HMGCL-201ENST00000235958 TULP4Q9NRJ4 1543 aa14.15□□□□□ -0.14
HMGCL-201ENST00000235958 RGPD8O14715 1765 aaPredicted RBP14.15□□□□□ -0.14
HMGCL-201ENST00000235958 ADGRB2O60241 1585 aa14.15□□□□□ -0.14
HMGCL-201ENST00000235958 PIP4K2BP78356 416 aa14.15□□□□□ -0.14
HMGCL-201ENST00000235958 MST1RQ04912 1400 aa14.15□□□□□ -0.14
HMGCL-201ENST00000235958 CDC42BPGQ6DT37 1551 aa14.14□□□□□ -0.15
HMGCL-201ENST00000235958 C1orf167Q5SNV9 1468 aa14.14□□□□□ -0.15
HMGCL-201ENST00000235958 PMFBP1Q8TBY8 1022 aa14.14□□□□□ -0.15
HMGCL-201ENST00000235958 TMC1Q8TDI8 760 aa14.14□□□□□ -0.15
HMGCL-201ENST00000235958 SLC12A5Q9H2X9 1139 aa14.14□□□□□ -0.15
HMGCL-201ENST00000235958 PHF8Q9UPP1 1060 aa14.14□□□□□ -0.15
HMGCL-201ENST00000235958 FMN2Q9NZ56 1722 aa14.13□□□□□ -0.15
HMGCL-201ENST00000235958 PLEKHG3A1L390 1219 aa14.13□□□□□ -0.15
HMGCL-201ENST00000235958 BRINP3Q76B58 766 aa14.13□□□□□ -0.15
HMGCL-201ENST00000235958 KIF7Q2M1P5 1343 aa14.13□□□□□ -0.15
HMGCL-201ENST00000235958 ANKARQ7Z5J8 1434 aa14.12□□□□□ -0.15
HMGCL-201ENST00000235958 WASHC2AQ641Q2 1341 aa14.12□□□□□ -0.15
HMGCL-201ENST00000235958 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
HMGCL-201ENST00000235958 ATAD2Q6PL18 1390 aa14.11□□□□□ -0.15
HMGCL-201ENST00000235958 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
HMGCL-201ENST00000235958 FOXO3O43524 673 aa14.11□□□□□ -0.15
HMGCL-201ENST00000235958 NGDNQ8NEJ9 315 aaKnown RBP14.11□□□□□ -0.15
HMGCL-201ENST00000235958 USP32Q8NFA0 1604 aa14.1□□□□□ -0.15
HMGCL-201ENST00000235958 ACEP12821 1306 aa14.1□□□□□ -0.15
HMGCL-201ENST00000235958 CCDC7Q96M83 1385 aa14.09□□□□□ -0.15
HMGCL-201ENST00000235958 PPIP5K1Q6PFW1 1433 aa14.09□□□□□ -0.15
HMGCL-201ENST00000235958 PSME1Q06323 249 aa14.09□□□□□ -0.15
HMGCL-201ENST00000235958 DDX17Q92841 729 aaKnown RBP14.09□□□□□ -0.15
HMGCL-201ENST00000235958 ATP7BP35670 1465 aa14.09□□□□□ -0.15
HMGCL-201ENST00000235958 ZNF692Q9BU19 519 aaPredicted RBP14.08□□□□□ -0.16
HMGCL-201ENST00000235958 KRT28Q7Z3Y7 464 aa14.07□□□□□ -0.16
HMGCL-201ENST00000235958 TERF2IPQ9NYB0 399 aa14.07□□□□□ -0.16
HMGCL-201ENST00000235958 XPCQ01831 940 aaPredicted RBP14.06□□□□□ -0.16
HMGCL-201ENST00000235958 PANK3Q9H999 370 aa14.06□□□□□ -0.16
HMGCL-201ENST00000235958 HDGFL2Q7Z4V5 671 aaPredicted RBP14.05□□□□□ -0.16
HMGCL-201ENST00000235958 NPHP3Q7Z494 1330 aa14.05□□□□□ -0.16
HMGCL-201ENST00000235958 POLR3AO14802 1390 aaPredicted RBP14.05□□□□□ -0.16
HMGCL-201ENST00000235958 CARD14Q9BXL6 1004 aa14.04□□□□□ -0.16
HMGCL-201ENST00000235958 NINLQ9Y2I6 1382 aa14.04□□□□□ -0.16
HMGCL-201ENST00000235958 ITSN1Q15811 1721 aa14.04□□□□□ -0.16
HMGCL-201ENST00000235958 DDX10Q13206 875 aaKnown RBP14.03□□□□□ -0.16
HMGCL-201ENST00000235958 CPSF1Q10570 1443 aaKnown RBP14.03□□□□□ -0.16
HMGCL-201ENST00000235958 ROBO1Q9Y6N7 1651 aa14.03□□□□□ -0.16
HMGCL-201ENST00000235958 KTN1Q86UP2 1357 aaKnown RBP14.02□□□□□ -0.17
HMGCL-201ENST00000235958 SOS2Q07890 1332 aaPredicted RBP14.02□□□□□ -0.17
HMGCL-201ENST00000235958 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
HMGCL-201ENST00000235958 TOPAZ1Q8N9V7 1692 aa14.01□□□□□ -0.17
HMGCL-201ENST00000235958 CD163L1Q9NR16 1453 aa14.01□□□□□ -0.17
HMGCL-201ENST00000235958 A0A1W2PP64 1363 aa14□□□□□ -0.17
HMGCL-201ENST00000235958 ANKRD36BQ8N2N9 1353 aa14□□□□□ -0.17
HMGCL-201ENST00000235958 HSPA1LP34931 641 aa14□□□□□ -0.17
HMGCL-201ENST00000235958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14□□□□□ -0.17
HMGCL-201ENST00000235958 LRRC59Q96AG4 307 aaKnown RBP14□□□□□ -0.17
HMGCL-201ENST00000235958 TTC21BQ7Z4L5 1316 aa13.99□□□□□ -0.17
HMGCL-201ENST00000235958 KIF1AQ12756 1690 aa13.99□□□□□ -0.17
HMGCL-201ENST00000235958 PER1O15534 1290 aaPredicted RBP13.99□□□□□ -0.17
HMGCL-201ENST00000235958 LMOD2Q6P5Q4 547 aa13.99□□□□□ -0.17
HMGCL-201ENST00000235958 ABTB2Q8N961 1025 aa13.98□□□□□ -0.17
HMGCL-201ENST00000235958 USP6P35125 1406 aa13.98□□□□□ -0.17
HMGCL-201ENST00000235958 MYOM1P52179 1685 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms