RNA–Protein interactions for RNA: ENST00000235453.8

DENND1B-201, Transcript of DENN domain containing 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DENND1B, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-201ENST00000235453 PLIN1O60240 522 aa12.6□□□□□ -0.39
DENND1B-201ENST00000235453 GTF2F1P35269 517 aaKnown RBP eCLIP12.6□□□□□ -0.39
DENND1B-201ENST00000235453 RBM25P49756 843 aaKnown RBP12.6□□□□□ -0.39
DENND1B-201ENST00000235453 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
DENND1B-201ENST00000235453 ARHGAP5Q13017 1502 aa12.6□□□□□ -0.39
DENND1B-201ENST00000235453 ZCCHC11Q5TAX3 1644 aaKnown RBP12.59□□□□□ -0.39
DENND1B-201ENST00000235453 NUP155O75694 1391 aa12.59□□□□□ -0.39
DENND1B-201ENST00000235453 KIAA1107Q9UPP5 1409 aa12.59□□□□□ -0.39
DENND1B-201ENST00000235453 SHANK2Q9UPX8 1470 aa12.59□□□□□ -0.39
DENND1B-201ENST00000235453 NLRP13Q86W25 1043 aa12.59□□□□□ -0.39
DENND1B-201ENST00000235453 NASPP49321 788 aaPredicted RBP12.58□□□□□ -0.4
DENND1B-201ENST00000235453 PARD3Q8TEW0 1356 aa12.58□□□□□ -0.4
DENND1B-201ENST00000235453 ARHGEF5Q12774 1597 aa12.58□□□□□ -0.4
DENND1B-201ENST00000235453 HSP90AB1P08238 724 aaKnown RBP12.57□□□□□ -0.4
DENND1B-201ENST00000235453 CDK11BP21127 795 aaKnown RBP12.57□□□□□ -0.4
DENND1B-201ENST00000235453 MYRIPQ8NFW9 859 aa12.57□□□□□ -0.4
DENND1B-201ENST00000235453 ZKSCAN5Q9Y2L8 839 aa12.57□□□□□ -0.4
DENND1B-201ENST00000235453 CCDC141Q6ZP82 1450 aa12.57□□□□□ -0.4
DENND1B-201ENST00000235453 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
DENND1B-201ENST00000235453 C20orf194Q5TEA3 1177 aa12.56□□□□□ -0.4
DENND1B-201ENST00000235453 PRIMPOLQ96LW4 560 aa12.56□□□□□ -0.4
DENND1B-201ENST00000235453 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.56□□□□□ -0.4
DENND1B-201ENST00000235453 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
DENND1B-201ENST00000235453 SEC24BO95487 1268 aa12.56□□□□□ -0.4
DENND1B-201ENST00000235453 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
DENND1B-201ENST00000235453 GBP4Q96PP9 640 aa12.56□□□□□ -0.4
DENND1B-201ENST00000235453 ARHGEF12Q9NZN5 1544 aa12.55□□□□□ -0.4
DENND1B-201ENST00000235453 CLEC17AQ6ZS10 378 aa12.55□□□□□ -0.4
DENND1B-201ENST00000235453 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
DENND1B-201ENST00000235453 RTEL1-TNFRSF6BF6WH68 1400 aa12.55□□□□□ -0.4
DENND1B-201ENST00000235453 DNAJC2Q99543 621 aaKnown RBP12.54□□□□□ -0.4
DENND1B-201ENST00000235453 USP47Q96K76 1375 aa12.54□□□□□ -0.4
DENND1B-201ENST00000235453 ZNF445P59923 1031 aa12.54□□□□□ -0.4
DENND1B-201ENST00000235453 HMGN5P82970 282 aaKnown RBP12.53□□□□□ -0.4
DENND1B-201ENST00000235453 SAMD1Q6SPF0 538 aaPredicted RBP12.53□□□□□ -0.4
DENND1B-201ENST00000235453 HMGB1P09429 215 aaKnown RBP12.53□□□□□ -0.4
DENND1B-201ENST00000235453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.53□□□□□ -0.4
DENND1B-201ENST00000235453 NBPF1Q3BBV0 1214 aa12.52□□□□□ -0.4
DENND1B-201ENST00000235453 RGS22Q8NE09 1264 aa12.52□□□□□ -0.4
DENND1B-201ENST00000235453 MMP14P50281 582 aa12.52□□□□□ -0.41
DENND1B-201ENST00000235453 HSP90B1P14625 803 aaKnown RBP12.51□□□□□ -0.41
DENND1B-201ENST00000235453 IRX3P78415 501 aaPredicted RBP12.51□□□□□ -0.41
DENND1B-201ENST00000235453 DNTTIP2Q5QJE6 756 aaKnown RBP12.51□□□□□ -0.41
DENND1B-201ENST00000235453 SMC5Q8IY18 1101 aa12.51□□□□□ -0.41
DENND1B-201ENST00000235453 UHRF1BP1Q6BDS2 1440 aa12.5□□□□□ -0.41
DENND1B-201ENST00000235453 GABPB1Q06547 395 aaPredicted RBP12.5□□□□□ -0.41
DENND1B-201ENST00000235453 SNX21Q969T3 373 aa12.5□□□□□ -0.41
DENND1B-201ENST00000235453 RAB3GAP1Q15042 981 aa12.5□□□□□ -0.41
DENND1B-201ENST00000235453 KLHL40Q2TBA0 621 aa12.5□□□□□ -0.41
DENND1B-201ENST00000235453 KDM5DQ9BY66 1539 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 FEZ1Q99689 392 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 TSPYL1Q9H0U9 437 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 CCDC39Q9UFE4 941 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 FAM135AQ9P2D6 1515 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 FAM193AP78312 1265 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
DENND1B-201ENST00000235453 DUSP27Q5VZP5 1158 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 YY1AP1Q9H869 796 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 UHRF1BP1LA0JNW5 1464 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 RALGAPBQ86X10 1494 aa12.49□□□□□ -0.41
DENND1B-201ENST00000235453 VGLL3A8MV65 326 aa12.48□□□□□ -0.41
DENND1B-201ENST00000235453 IRX5P78411 483 aaPredicted RBP12.48□□□□□ -0.41
DENND1B-201ENST00000235453 PLCH2O75038 1416 aa12.48□□□□□ -0.41
DENND1B-201ENST00000235453 TRAPPC8Q9Y2L5 1435 aa12.48□□□□□ -0.41
DENND1B-201ENST00000235453 ZNF521Q96K83 1311 aa12.48□□□□□ -0.41
DENND1B-201ENST00000235453 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
DENND1B-201ENST00000235453 TNPO1Q92973 898 aaKnown RBP12.47□□□□□ -0.41
DENND1B-201ENST00000235453 SECISBP2LQ93073 1101 aaKnown RBP12.47□□□□□ -0.41
DENND1B-201ENST00000235453 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
DENND1B-201ENST00000235453 CCDC66A2RUB6 948 aa12.46□□□□□ -0.41
DENND1B-201ENST00000235453 CBX1P83916 185 aa12.46□□□□□ -0.41
DENND1B-201ENST00000235453 ATP2B3Q16720 1220 aa12.46□□□□□ -0.41
DENND1B-201ENST00000235453 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
DENND1B-201ENST00000235453 BCCIPQ9P287 314 aaKnown RBP eCLIP12.46□□□□□ -0.41
DENND1B-201ENST00000235453 MAST1Q9Y2H9 1570 aa12.46□□□□□ -0.41
DENND1B-201ENST00000235453 TULP2O00295 520 aa12.46□□□□□ -0.42
DENND1B-201ENST00000235453 PDE3AQ14432 1141 aa12.46□□□□□ -0.42
DENND1B-201ENST00000235453 OSCARQ8IYS5 282 aa12.46□□□□□ -0.42
DENND1B-201ENST00000235453 AFAP1Q8N556 730 aa12.46□□□□□ -0.42
DENND1B-201ENST00000235453 EFCAB2Q5VUJ9 269 aa12.45□□□□□ -0.42
DENND1B-201ENST00000235453 HSCBQ8IWL3 235 aa12.45□□□□□ -0.42
DENND1B-201ENST00000235453 TRMT2AQ8IZ69 625 aaKnown RBP12.45□□□□□ -0.42
DENND1B-201ENST00000235453 IGHDP01880 384 aa12.45□□□□□ -0.42
DENND1B-201ENST00000235453 CREBRFQ8IUR6 639 aa12.45□□□□□ -0.42
DENND1B-201ENST00000235453 POLR3GLQ9BT43 218 aa12.45□□□□□ -0.42
DENND1B-201ENST00000235453 PANK3Q9H999 370 aa12.45□□□□□ -0.42
DENND1B-201ENST00000235453 CGNQ9P2M7 1197 aaKnown RBP12.45□□□□□ -0.42
DENND1B-201ENST00000235453 ABCC1P33527 1531 aa12.44□□□□□ -0.42
DENND1B-201ENST00000235453 PLXNC1O60486 1568 aa12.44□□□□□ -0.42
DENND1B-201ENST00000235453 GOLGA6L22H0YM25 854 aa12.43□□□□□ -0.42
DENND1B-201ENST00000235453 RGL3Q3MIN7 710 aa12.43□□□□□ -0.42
DENND1B-201ENST00000235453 UNC13BO14795 1591 aa12.43□□□□□ -0.42
DENND1B-201ENST00000235453 PLA2R1Q13018 1463 aa12.43□□□□□ -0.42
DENND1B-201ENST00000235453 ANKRD7Q92527 254 aa12.42□□□□□ -0.42
DENND1B-201ENST00000235453 C22orf23Q9BZE7 217 aa12.42□□□□□ -0.42
DENND1B-201ENST00000235453 OGFRQ9NZT2 677 aa12.42□□□□□ -0.42
DENND1B-201ENST00000235453 KIAA2012Q0VF49 1180 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms