RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 USP21Q9UK80 565 aa3.48□□□□□ -1.85
PRKD3-201ENST00000234179 COL22A1Q8NFW1 1626 aaPredicted RBP3.47□□□□□ -1.85
PRKD3-201ENST00000234179 NUP155O75694 1391 aa3.47□□□□□ -1.85
PRKD3-201ENST00000234179 CDC42BPGQ6DT37 1551 aa3.47□□□□□ -1.85
PRKD3-201ENST00000234179 STAC3Q96MF2 364 aa3.47□□□□□ -1.85
PRKD3-201ENST00000234179 BAG6P46379 1132 aa3.47□□□□□ -1.85
PRKD3-201ENST00000234179 ARHGEF10O15013 1369 aa3.47□□□□□ -1.85
PRKD3-201ENST00000234179 ANKRD30BQ9BXX2 1392 aa3.47□□□□□ -1.85
PRKD3-201ENST00000234179 C8orf37Q96NL8 207 aa3.47□□□□□ -1.85
PRKD3-201ENST00000234179 MYOM2P54296 1465 aa3.47□□□□□ -1.85
PRKD3-201ENST00000234179 LRP5O75197 1615 aa3.46□□□□□ -1.85
PRKD3-201ENST00000234179 ZNF326Q5BKZ1 582 aaKnown RBP3.46□□□□□ -1.85
PRKD3-201ENST00000234179 TECPR2O15040 1411 aa3.46□□□□□ -1.86
PRKD3-201ENST00000234179 HMGB2P26583 209 aaKnown RBP3.46□□□□□ -1.86
PRKD3-201ENST00000234179 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.46□□□□□ -1.86
PRKD3-201ENST00000234179 SBNO1A3KN83 1393 aa3.46□□□□□ -1.86
PRKD3-201ENST00000234179 KIF1AQ12756 1690 aa3.46□□□□□ -1.86
PRKD3-201ENST00000234179 FAM50AQ14320 339 aaKnown RBP3.46□□□□□ -1.86
PRKD3-201ENST00000234179 KANK4Q5T7N3 995 aaPredicted RBP3.46□□□□□ -1.86
PRKD3-201ENST00000234179 UNC5CLQ8IV45 518 aa3.45□□□□□ -1.86
PRKD3-201ENST00000234179 GJD4Q96KN9 370 aaPredicted RBP3.45□□□□□ -1.86
PRKD3-201ENST00000234179 CHIC2Q9UKJ5 165 aa3.45□□□□□ -1.86
PRKD3-201ENST00000234179 VPS72Q15906 364 aa3.45□□□□□ -1.86
PRKD3-201ENST00000234179 PTPRUQ92729 1446 aa3.45□□□□□ -1.86
PRKD3-201ENST00000234179 ABCC11Q96J66 1382 aa3.45□□□□□ -1.86
PRKD3-201ENST00000234179 RNF39Q9H2S5 420 aa3.45□□□□□ -1.86
PRKD3-201ENST00000234179 DISP2A7MBM2 1401 aa3.45□□□□□ -1.86
PRKD3-201ENST00000234179 ANKARQ7Z5J8 1434 aa3.45□□□□□ -1.86
PRKD3-201ENST00000234179 RBM42Q9BTD8 480 aaKnown RBP3.45□□□□□ -1.86
PRKD3-201ENST00000234179 RNF216Q9NWF9 866 aaPredicted RBP3.45□□□□□ -1.86
PRKD3-201ENST00000234179 RALGAPBQ86X10 1494 aa3.44□□□□□ -1.86
PRKD3-201ENST00000234179 ADGRB2O60241 1585 aa3.44□□□□□ -1.86
PRKD3-201ENST00000234179 NEXMIFQ5QGS0 1516 aa3.44□□□□□ -1.86
PRKD3-201ENST00000234179 E9PCH4 1651 aa3.44□□□□□ -1.86
PRKD3-201ENST00000234179 HAP1P54257 671 aaPredicted RBP3.44□□□□□ -1.86
PRKD3-201ENST00000234179 RRBP1Q9P2E9 1410 aaKnown RBP3.44□□□□□ -1.86
PRKD3-201ENST00000234179 CFAP65Q6ZU64 1925 aaKnown RBP3.44□□□□□ -1.86
PRKD3-201ENST00000234179 BRD4O60885 1362 aaPredicted RBP3.44□□□□□ -1.86
PRKD3-201ENST00000234179 SLIT2O94813 1529 aa3.44□□□□□ -1.86
PRKD3-201ENST00000234179 ONECUT3O60422 494 aaPredicted RBP3.44□□□□□ -1.86
PRKD3-201ENST00000234179 RBM33Q96EV2 1170 aaKnown RBP3.44□□□□□ -1.86
PRKD3-201ENST00000234179 NBPF8Q3BBV2 869 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 NBPF14Q5TI25 921 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 SPATA31A3Q5VYP0 1347 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 TNS3Q68CZ2 1445 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 ADAMTS2O95450 1211 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 METP08581 1390 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 GPRASP1Q5JY77 1395 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 NRXN3Q9Y4C0 1643 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 PXDNQ92626 1479 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 NINLQ9Y2I6 1382 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 NWD2Q9ULI1 1742 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 KRT27Q7Z3Y8 459 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 PROM2Q8N271 834 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 NAIPQ13075 1403 aa3.43□□□□□ -1.86
PRKD3-201ENST00000234179 DHX57Q6P158 1386 aaKnown RBP3.42□□□□□ -1.86
PRKD3-201ENST00000234179 PPP4R3CPQ6ZMV5 832 aa3.42□□□□□ -1.86
PRKD3-201ENST00000234179 ZBTB12Q9Y330 459 aaPredicted RBP3.42□□□□□ -1.86
PRKD3-201ENST00000234179 KIF1BO60333 1816 aa3.42□□□□□ -1.86
PRKD3-201ENST00000234179 BCL9LQ86UU0 1499 aa3.42□□□□□ -1.86
PRKD3-201ENST00000234179 ESCO1Q5FWF5 840 aa3.42□□□□□ -1.86
PRKD3-201ENST00000234179 DLC1Q96QB1 1528 aa3.42□□□□□ -1.86
PRKD3-201ENST00000234179 FAM196AQ6ZSG2 479 aa3.42□□□□□ -1.86
PRKD3-201ENST00000234179 PHF8Q9UPP1 1060 aa3.42□□□□□ -1.86
PRKD3-201ENST00000234179 KNDC1Q76NI1 1749 aa3.41□□□□□ -1.86
PRKD3-201ENST00000234179 SEPT12Q8IYM1 358 aa3.41□□□□□ -1.86
PRKD3-201ENST00000234179 ROBO2Q9HCK4 1378 aa3.41□□□□□ -1.86
PRKD3-201ENST00000234179 NRXN1Q9ULB1 1477 aa3.41□□□□□ -1.86
PRKD3-201ENST00000234179 NALCNQ8IZF0 1738 aa3.41□□□□□ -1.86
PRKD3-201ENST00000234179 MARF1Q9Y4F3 1742 aaKnown RBP3.41□□□□□ -1.86
PRKD3-201ENST00000234179 USP32Q8NFA0 1604 aa3.41□□□□□ -1.86
PRKD3-201ENST00000234179 MYO5BQ9ULV0 1848 aa3.41□□□□□ -1.86
PRKD3-201ENST00000234179 NPM3O75607 178 aaKnown RBP3.41□□□□□ -1.86
PRKD3-201ENST00000234179 KRT28Q7Z3Y7 464 aa3.41□□□□□ -1.86
PRKD3-201ENST00000234179 CDCA7Q9BWT1 371 aaPredicted RBP3.41□□□□□ -1.86
PRKD3-201ENST00000234179 ATP7BP35670 1465 aa3.4□□□□□ -1.86
PRKD3-201ENST00000234179 RGPD1P0DJD0 1748 aa3.4□□□□□ -1.86
PRKD3-201ENST00000234179 THRAP3Q9Y2W1 955 aaKnown RBP3.4□□□□□ -1.87
PRKD3-201ENST00000234179 ORAI2Q96SN7 254 aa3.4□□□□□ -1.87
PRKD3-201ENST00000234179 CCDC9Q9Y3X0 531 aaKnown RBP3.4□□□□□ -1.87
PRKD3-201ENST00000234179 CLTCL1P53675 1640 aa3.4□□□□□ -1.87
PRKD3-201ENST00000234179 YTHDC2Q9H6S0 1430 aaKnown RBP3.39□□□□□ -1.87
PRKD3-201ENST00000234179 HRCP23327 699 aa3.39□□□□□ -1.87
PRKD3-201ENST00000234179 SLC4A1APQ9BWU0 796 aaKnown RBP3.39□□□□□ -1.87
PRKD3-201ENST00000234179 COL14A1Q05707 1796 aaKnown RBP3.39□□□□□ -1.87
PRKD3-201ENST00000234179 FMN2Q9NZ56 1722 aa3.39□□□□□ -1.87
PRKD3-201ENST00000234179 SPON1Q9HCB6 807 aa3.39□□□□□ -1.87
PRKD3-201ENST00000234179 GLI3P10071 1580 aa3.39□□□□□ -1.87
PRKD3-201ENST00000234179 FOXO3O43524 673 aa3.39□□□□□ -1.87
PRKD3-201ENST00000234179 SAMD1Q6SPF0 538 aaPredicted RBP3.39□□□□□ -1.87
PRKD3-201ENST00000234179 BARGINQ6ZT62 677 aa3.39□□□□□ -1.87
PRKD3-201ENST00000234179 C14orf93Q9H972 538 aaKnown RBP3.38□□□□□ -1.87
PRKD3-201ENST00000234179 A0A0G2JS52 829 aa3.38□□□□□ -1.87
PRKD3-201ENST00000234179 MYT1Q01538 1121 aa3.38□□□□□ -1.87
PRKD3-201ENST00000234179 POGKQ9P215 609 aa3.38□□□□□ -1.87
PRKD3-201ENST00000234179 SPATA31A5Q5VU36 1347 aa3.38□□□□□ -1.87
PRKD3-201ENST00000234179 SPATA31A7Q8IWB4 1347 aa3.38□□□□□ -1.87
PRKD3-201ENST00000234179 PIK3C2GO75747 1445 aa3.38□□□□□ -1.87
PRKD3-201ENST00000234179 PPP1R1BQ9UD71 204 aaPredicted RBP3.38□□□□□ -1.87
PRKD3-201ENST00000234179 PPLO60437 1756 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms