RNA–Protein interactions for RNA: ENST00000231136.3

PCDHB6-201, Transcript of protocadherin beta 6, humanhuman

APPRIS P1 BASIC

Gene PCDHB6, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-201ENST00000231136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
PCDHB6-201ENST00000231136 KIAA1210Q9ULL0 1709 aa17.46■□□□□ 0.38
PCDHB6-201ENST00000231136 GGNBP2Q9H3C7 697 aa17.45■□□□□ 0.38
PCDHB6-201ENST00000231136 NSD3Q9BZ95 1437 aa17.44■□□□□ 0.38
PCDHB6-201ENST00000231136 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.44■□□□□ 0.38
PCDHB6-201ENST00000231136 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
PCDHB6-201ENST00000231136 QRICH2Q9H0J4 1663 aa17.43■□□□□ 0.38
PCDHB6-201ENST00000231136 TULP4Q9NRJ4 1543 aa17.43■□□□□ 0.38
PCDHB6-201ENST00000231136 CCDC146Q8IYE0 955 aa17.43■□□□□ 0.38
PCDHB6-201ENST00000231136 SETBP1Q9Y6X0 1596 aa17.43■□□□□ 0.38
PCDHB6-201ENST00000231136 ADAMTS8Q9UP79 889 aa17.42■□□□□ 0.38
PCDHB6-201ENST00000231136 C3P01024 1663 aa17.42■□□□□ 0.38
PCDHB6-201ENST00000231136 MORC1Q86VD1 984 aa17.41■□□□□ 0.38
PCDHB6-201ENST00000231136 ZRANB1Q9UGI0 708 aa17.41■□□□□ 0.38
PCDHB6-201ENST00000231136 ROBO2Q9HCK4 1378 aa17.4■□□□□ 0.38
PCDHB6-201ENST00000231136 FER1L4A9Z1Z3 1794 aa17.4■□□□□ 0.38
PCDHB6-201ENST00000231136 THEMISQ8N1K5 641 aaPredicted RBP17.4■□□□□ 0.38
PCDHB6-201ENST00000231136 AMOTL2Q9Y2J4 779 aa17.4■□□□□ 0.38
PCDHB6-201ENST00000231136 HDGFP51858 240 aaKnown RBP17.4■□□□□ 0.38
PCDHB6-201ENST00000231136 B4GALNT3Q6L9W6 998 aa17.4■□□□□ 0.38
PCDHB6-201ENST00000231136 MYOM1P52179 1685 aa17.4■□□□□ 0.38
PCDHB6-201ENST00000231136 ARHGEF28Q8N1W1 1705 aaKnown RBP17.39■□□□□ 0.38
PCDHB6-201ENST00000231136 PLEKHG5O94827 1062 aa17.39■□□□□ 0.37
PCDHB6-201ENST00000231136 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
PCDHB6-201ENST00000231136 ADAMTS13Q76LX8 1427 aa17.37■□□□□ 0.37
PCDHB6-201ENST00000231136 RIMS1Q86UR5 1692 aaKnown RBP17.37■□□□□ 0.37
PCDHB6-201ENST00000231136 A0A1W2PP64 1363 aa17.37■□□□□ 0.37
PCDHB6-201ENST00000231136 SBNO2Q9Y2G9 1366 aa17.37■□□□□ 0.37
PCDHB6-201ENST00000231136 BRD4O60885 1362 aaPredicted RBP17.37■□□□□ 0.37
PCDHB6-201ENST00000231136 LRPPRCP42704 1394 aaKnown RBP17.37■□□□□ 0.37
PCDHB6-201ENST00000231136 PPM1GO15355 546 aaPredicted RBP17.36■□□□□ 0.37
PCDHB6-201ENST00000231136 UBR1Q8IWV7 1749 aa17.36■□□□□ 0.37
PCDHB6-201ENST00000231136 SOX12O15370 315 aa17.36■□□□□ 0.37
PCDHB6-201ENST00000231136 HSPA2P54652 639 aa17.36■□□□□ 0.37
PCDHB6-201ENST00000231136 CDCA7LQ96GN5 454 aa17.36■□□□□ 0.37
PCDHB6-201ENST00000231136 NRXN3Q9Y4C0 1643 aa17.36■□□□□ 0.37
PCDHB6-201ENST00000231136 KCNA6P17658 529 aa17.36■□□□□ 0.37
PCDHB6-201ENST00000231136 PMFBP1Q8TBY8 1022 aa17.36■□□□□ 0.37
PCDHB6-201ENST00000231136 PTPRUQ92729 1446 aa17.35■□□□□ 0.37
PCDHB6-201ENST00000231136 WASLO00401 505 aaPredicted RBP17.35■□□□□ 0.37
PCDHB6-201ENST00000231136 MTHFSP49914 203 aa17.34■□□□□ 0.37
PCDHB6-201ENST00000231136 NUDT16Q96DE0 195 aaKnown RBP17.34■□□□□ 0.37
PCDHB6-201ENST00000231136 ABCC11Q96J66 1382 aa17.33■□□□□ 0.37
PCDHB6-201ENST00000231136 PRR36Q9H6K5 1346 aa17.33■□□□□ 0.36
PCDHB6-201ENST00000231136 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
PCDHB6-201ENST00000231136 WDR43Q15061 677 aaKnown RBP eCLIP17.32■□□□□ 0.36
PCDHB6-201ENST00000231136 ANP32EQ9BTT0 268 aa17.32■□□□□ 0.36
PCDHB6-201ENST00000231136 FYB1O15117 783 aa17.32■□□□□ 0.36
PCDHB6-201ENST00000231136 MYO3AQ8NEV4 1616 aa17.31■□□□□ 0.36
PCDHB6-201ENST00000231136 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
PCDHB6-201ENST00000231136 ZBED9Q6R2W3 1325 aa17.31■□□□□ 0.36
PCDHB6-201ENST00000231136 NLRP1Q9C000 1473 aa17.31■□□□□ 0.36
PCDHB6-201ENST00000231136 NME9Q86XW9 330 aa17.31■□□□□ 0.36
PCDHB6-201ENST00000231136 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
PCDHB6-201ENST00000231136 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
PCDHB6-201ENST00000231136 PLEKHG1Q9ULL1 1385 aa17.29■□□□□ 0.36
PCDHB6-201ENST00000231136 ANKLE2Q86XL3 938 aa17.29■□□□□ 0.36
PCDHB6-201ENST00000231136 ANKRD36BQ8N2N9 1353 aa17.28■□□□□ 0.36
PCDHB6-201ENST00000231136 TERF2IPQ9NYB0 399 aa17.28■□□□□ 0.36
PCDHB6-201ENST00000231136 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.36
PCDHB6-201ENST00000231136 NUTM2GQ5VZR2 741 aa17.27■□□□□ 0.36
PCDHB6-201ENST00000231136 RBM19Q9Y4C8 960 aaKnown RBP17.27■□□□□ 0.35
PCDHB6-201ENST00000231136 SETD1AO15047 1707 aaKnown RBP17.26■□□□□ 0.35
PCDHB6-201ENST00000231136 APAF1O14727 1248 aa17.26■□□□□ 0.35
PCDHB6-201ENST00000231136 CD163L1Q9NR16 1453 aa17.26■□□□□ 0.35
PCDHB6-201ENST00000231136 TBX22Q9Y458 520 aa17.25■□□□□ 0.35
PCDHB6-201ENST00000231136 PPIP5K1Q6PFW1 1433 aa17.25■□□□□ 0.35
PCDHB6-201ENST00000231136 CCDC61Q9Y6R9 512 aa17.25■□□□□ 0.35
PCDHB6-201ENST00000231136 ATAD2Q6PL18 1390 aa17.24■□□□□ 0.35
PCDHB6-201ENST00000231136 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
PCDHB6-201ENST00000231136 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
PCDHB6-201ENST00000231136 C14orf37Q86TY3 774 aa17.23■□□□□ 0.35
PCDHB6-201ENST00000231136 DMRT2Q9Y5R5 561 aa17.22■□□□□ 0.35
PCDHB6-201ENST00000231136 CEP170BQ9Y4F5 1589 aaPredicted RBP17.22■□□□□ 0.35
PCDHB6-201ENST00000231136 EMILIN1Q9Y6C2 1016 aa17.21■□□□□ 0.35
PCDHB6-201ENST00000231136 ACEP12821 1306 aa17.21■□□□□ 0.35
PCDHB6-201ENST00000231136 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
PCDHB6-201ENST00000231136 ARHGAP23Q9P227 1491 aa17.2■□□□□ 0.34
PCDHB6-201ENST00000231136 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
PCDHB6-201ENST00000231136 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCDHB6-201ENST00000231136 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
PCDHB6-201ENST00000231136 KDM4FA0A1W2PPD8 638 aa17.19■□□□□ 0.34
PCDHB6-201ENST00000231136 CCDC136Q96JN2 1154 aa17.19■□□□□ 0.34
PCDHB6-201ENST00000231136 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
PCDHB6-201ENST00000231136 SLIT1O75093 1534 aa17.18■□□□□ 0.34
PCDHB6-201ENST00000231136 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.18■□□□□ 0.34
PCDHB6-201ENST00000231136 NGDNQ8NEJ9 315 aaKnown RBP17.18■□□□□ 0.34
PCDHB6-201ENST00000231136 ADAMTSL3P82987 1691 aa17.18■□□□□ 0.34
PCDHB6-201ENST00000231136 MED14O60244 1454 aa17.17■□□□□ 0.34
PCDHB6-201ENST00000231136 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
PCDHB6-201ENST00000231136 PPP4R2Q9NY27 417 aa17.17■□□□□ 0.34
PCDHB6-201ENST00000231136 NUDCQ9Y266 331 aa17.17■□□□□ 0.34
PCDHB6-201ENST00000231136 PAK3O75914 559 aaPredicted RBP17.16■□□□□ 0.34
PCDHB6-201ENST00000231136 PUS7Q96PZ0 661 aaKnown RBP17.16■□□□□ 0.34
PCDHB6-201ENST00000231136 PLIN1O60240 522 aa17.16■□□□□ 0.34
PCDHB6-201ENST00000231136 HMOX1P09601 288 aa17.15■□□□□ 0.34
PCDHB6-201ENST00000231136 DLC1Q96QB1 1528 aa17.14■□□□□ 0.33
PCDHB6-201ENST00000231136 TECPR2O15040 1411 aa17.14■□□□□ 0.33
PCDHB6-201ENST00000231136 FAM135BQ49AJ0 1406 aa17.14■□□□□ 0.33
PCDHB6-201ENST00000231136 POLKQ9UBT6 870 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms