RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 RBM33Q96EV2 1170 aaKnown RBP13.96□□□□□ -0.17
LAMA4-201ENST00000230538 WASHC4Q2M389 1173 aa13.96□□□□□ -0.18
LAMA4-201ENST00000230538 AIMP1Q12904 312 aaKnown RBP13.95□□□□□ -0.18
LAMA4-201ENST00000230538 RAPGEF4Q8WZA2 1011 aa13.95□□□□□ -0.18
LAMA4-201ENST00000230538 NINLQ9Y2I6 1382 aa13.95□□□□□ -0.18
LAMA4-201ENST00000230538 FGD6Q6ZV73 1430 aa13.95□□□□□ -0.18
LAMA4-201ENST00000230538 FBXO3Q9UK99 471 aa13.95□□□□□ -0.18
LAMA4-201ENST00000230538 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.95□□□□□ -0.18
LAMA4-201ENST00000230538 FYB1O15117 783 aa13.95□□□□□ -0.18
LAMA4-201ENST00000230538 IFT57Q9NWB7 429 aa13.95□□□□□ -0.18
LAMA4-201ENST00000230538 FAM13BQ9NYF5 915 aa13.95□□□□□ -0.18
LAMA4-201ENST00000230538 MIA2Q96PC5 1412 aa13.94□□□□□ -0.18
LAMA4-201ENST00000230538 RUFY1Q96T51 708 aa13.94□□□□□ -0.18
LAMA4-201ENST00000230538 MYOM3Q5VTT5 1437 aa13.94□□□□□ -0.18
LAMA4-201ENST00000230538 BCL11BQ9C0K0 894 aaPredicted RBP13.94□□□□□ -0.18
LAMA4-201ENST00000230538 CWC22Q9HCG8 908 aaKnown RBP13.94□□□□□ -0.18
LAMA4-201ENST00000230538 CDC45O75419 566 aa13.94□□□□□ -0.18
LAMA4-201ENST00000230538 CCDC27Q2M243 656 aa13.94□□□□□ -0.18
LAMA4-201ENST00000230538 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
LAMA4-201ENST00000230538 ZNF644Q9H582 1327 aaPredicted RBP13.94□□□□□ -0.18
LAMA4-201ENST00000230538 UBTFL1P0CB47 393 aaPredicted RBP13.94□□□□□ -0.18
LAMA4-201ENST00000230538 BRMS1Q9HCU9 246 aa13.94□□□□□ -0.18
LAMA4-201ENST00000230538 KIF21BO75037 1637 aa13.93□□□□□ -0.18
LAMA4-201ENST00000230538 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
LAMA4-201ENST00000230538 AK7Q96M32 723 aa13.93□□□□□ -0.18
LAMA4-201ENST00000230538 NFKBIBQ15653 356 aa13.93□□□□□ -0.18
LAMA4-201ENST00000230538 MNS1Q8NEH6 495 aa13.93□□□□□ -0.18
LAMA4-201ENST00000230538 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
LAMA4-201ENST00000230538 CABP2Q9NPB3 220 aa13.92□□□□□ -0.18
LAMA4-201ENST00000230538 CT47A1Q5JQC4 288 aaPredicted RBP13.92□□□□□ -0.18
LAMA4-201ENST00000230538 AAMPQ13685 434 aa13.92□□□□□ -0.18
LAMA4-201ENST00000230538 CNTROBQ8N137 903 aa13.92□□□□□ -0.18
LAMA4-201ENST00000230538 NAT10Q9H0A0 1025 aaKnown RBP13.92□□□□□ -0.18
LAMA4-201ENST00000230538 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.92□□□□□ -0.18
LAMA4-201ENST00000230538 PSMA5P28066 241 aa13.91□□□□□ -0.18
LAMA4-201ENST00000230538 ARGLU1Q9NWB6 273 aaPredicted RBP13.91□□□□□ -0.18
LAMA4-201ENST00000230538 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
LAMA4-201ENST00000230538 GGNBP2Q9H3C7 697 aa13.91□□□□□ -0.18
LAMA4-201ENST00000230538 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
LAMA4-201ENST00000230538 EPS15P42566 896 aa13.91□□□□□ -0.18
LAMA4-201ENST00000230538 CDR1P51861 262 aa13.91□□□□□ -0.18
LAMA4-201ENST00000230538 FAM43AQ8N2R8 423 aa13.91□□□□□ -0.18
LAMA4-201ENST00000230538 XBP1P17861 261 aa13.9□□□□□ -0.18
LAMA4-201ENST00000230538 ACBD3Q9H3P7 528 aa13.9□□□□□ -0.18
LAMA4-201ENST00000230538 ODF2Q5BJF6 829 aa13.9□□□□□ -0.18
LAMA4-201ENST00000230538 ATF3P18847 181 aa13.9□□□□□ -0.18
LAMA4-201ENST00000230538 ADAMTS8Q9UP79 889 aa13.9□□□□□ -0.18
LAMA4-201ENST00000230538 LRRC9Q6ZRR7 1453 aa13.9□□□□□ -0.18
LAMA4-201ENST00000230538 KDM4AO75164 1064 aa13.9□□□□□ -0.18
LAMA4-201ENST00000230538 PDILTQ8N807 584 aa13.9□□□□□ -0.19
LAMA4-201ENST00000230538 WASHC2AQ641Q2 1341 aa13.89□□□□□ -0.19
LAMA4-201ENST00000230538 NUTM2GQ5VZR2 741 aa13.89□□□□□ -0.19
LAMA4-201ENST00000230538 FSD1Q9BTV5 496 aa13.89□□□□□ -0.19
LAMA4-201ENST00000230538 NLRP2Q9NX02 1062 aa13.89□□□□□ -0.19
LAMA4-201ENST00000230538 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
LAMA4-201ENST00000230538 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
LAMA4-201ENST00000230538 CCDC39Q9UFE4 941 aa13.88□□□□□ -0.19
LAMA4-201ENST00000230538 CDCA7LQ96GN5 454 aa13.88□□□□□ -0.19
LAMA4-201ENST00000230538 MTMR7Q9Y216 660 aa13.88□□□□□ -0.19
LAMA4-201ENST00000230538 BRD4O60885 1362 aaPredicted RBP13.88□□□□□ -0.19
LAMA4-201ENST00000230538 RRP12Q5JTH9 1297 aaKnown RBP13.87□□□□□ -0.19
LAMA4-201ENST00000230538 SDF4Q9BRK5 362 aa13.87□□□□□ -0.19
LAMA4-201ENST00000230538 OFD1O75665 1012 aa13.87□□□□□ -0.19
LAMA4-201ENST00000230538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.87□□□□□ -0.19
LAMA4-201ENST00000230538 CCDC30Q5VVM6 783 aa13.87□□□□□ -0.19
LAMA4-201ENST00000230538 KRI1Q8N9T8 703 aaKnown RBP13.87□□□□□ -0.19
LAMA4-201ENST00000230538 STAC3Q96MF2 364 aa13.87□□□□□ -0.19
LAMA4-201ENST00000230538 NASPP49321 788 aaPredicted RBP13.86□□□□□ -0.19
LAMA4-201ENST00000230538 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
LAMA4-201ENST00000230538 CAGE1Q8TC20 777 aa13.86□□□□□ -0.19
LAMA4-201ENST00000230538 TMEM132EQ6IEE7 984 aa13.86□□□□□ -0.19
LAMA4-201ENST00000230538 TBC1D2BQ9UPU7 963 aa13.86□□□□□ -0.19
LAMA4-201ENST00000230538 SART3Q15020 963 aaKnown RBP13.86□□□□□ -0.19
LAMA4-201ENST00000230538 HSP90B2PQ58FF3 399 aa13.86□□□□□ -0.19
LAMA4-201ENST00000230538 LETM1O95202 739 aaPredicted RBP13.86□□□□□ -0.19
LAMA4-201ENST00000230538 HSP90AB2PQ58FF8 381 aa13.86□□□□□ -0.19
LAMA4-201ENST00000230538 DNAJC2Q99543 621 aaKnown RBP13.86□□□□□ -0.19
LAMA4-201ENST00000230538 R3HCC1Q9Y3T6 440 aaKnown RBP13.86□□□□□ -0.19
LAMA4-201ENST00000230538 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
LAMA4-201ENST00000230538 CLASRPQ8N2M8 674 aaKnown RBP13.85□□□□□ -0.19
LAMA4-201ENST00000230538 C1orf115Q9H7X2 142 aa13.85□□□□□ -0.19
LAMA4-201ENST00000230538 GNAI3P08754 354 aa13.85□□□□□ -0.19
LAMA4-201ENST00000230538 IKQ13123 557 aaPredicted RBP13.85□□□□□ -0.19
LAMA4-201ENST00000230538 ZFYVE27Q5T4F4 411 aa13.85□□□□□ -0.19
LAMA4-201ENST00000230538 CCDC173Q0VFZ6 552 aa13.85□□□□□ -0.19
LAMA4-201ENST00000230538 SURF6O75683 361 aaKnown RBP13.84□□□□□ -0.19
LAMA4-201ENST00000230538 MRE11P49959 708 aa13.84□□□□□ -0.19
LAMA4-201ENST00000230538 NLRP6P59044 892 aa13.84□□□□□ -0.19
LAMA4-201ENST00000230538 ARHGAP5Q13017 1502 aa13.84□□□□□ -0.19
LAMA4-201ENST00000230538 IGF1RP08069 1367 aa13.84□□□□□ -0.19
LAMA4-201ENST00000230538 RNF214Q8ND24 703 aa13.84□□□□□ -0.19
LAMA4-201ENST00000230538 FYCO1Q9BQS8 1478 aa13.84□□□□□ -0.19
LAMA4-201ENST00000230538 MTHFSP49914 203 aa13.84□□□□□ -0.19
LAMA4-201ENST00000230538 TTLL5Q6EMB2 1281 aa13.83□□□□□ -0.19
LAMA4-201ENST00000230538 KIF6Q6ZMV9 814 aa13.83□□□□□ -0.2
LAMA4-201ENST00000230538 PDZRN3Q9UPQ7 1066 aa13.83□□□□□ -0.2
LAMA4-201ENST00000230538 ANKRD50Q9ULJ7 1429 aa13.83□□□□□ -0.2
LAMA4-201ENST00000230538 HIP1O00291 1037 aa13.83□□□□□ -0.2
LAMA4-201ENST00000230538 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
LAMA4-201ENST00000230538 GAS2L2Q8NHY3 880 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms