RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ADGRB2O60241 1585 aa12.44□□□□□ -0.42
HLA-DOA-201ENST00000229829 NRXN1Q9ULB1 1477 aa12.44□□□□□ -0.42
HLA-DOA-201ENST00000229829 SKAP1Q86WV1 359 aa12.43□□□□□ -0.42
HLA-DOA-201ENST00000229829 RSPH4AQ5TD94 716 aa12.43□□□□□ -0.42
HLA-DOA-201ENST00000229829 MYO5BQ9ULV0 1848 aa12.43□□□□□ -0.42
HLA-DOA-201ENST00000229829 YEATS2Q9ULM3 1422 aa12.43□□□□□ -0.42
HLA-DOA-201ENST00000229829 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
HLA-DOA-201ENST00000229829 VSIG10Q8N0Z9 540 aa12.41□□□□□ -0.42
HLA-DOA-201ENST00000229829 KDM4FA0A1W2PPD8 638 aa12.41□□□□□ -0.42
HLA-DOA-201ENST00000229829 NHSL1Q5SYE7 1610 aa12.4□□□□□ -0.42
HLA-DOA-201ENST00000229829 NCOA3Q9Y6Q9 1424 aa12.4□□□□□ -0.42
HLA-DOA-201ENST00000229829 SLC4A3P48751 1232 aa12.39□□□□□ -0.43
HLA-DOA-201ENST00000229829 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
HLA-DOA-201ENST00000229829 SHPRHQ149N8 1683 aa12.39□□□□□ -0.43
HLA-DOA-201ENST00000229829 ERVK-7P63135 1459 aa12.39□□□□□ -0.43
HLA-DOA-201ENST00000229829 PDE4AP27815 886 aa12.38□□□□□ -0.43
HLA-DOA-201ENST00000229829 ADAMTS8Q9UP79 889 aa12.38□□□□□ -0.43
HLA-DOA-201ENST00000229829 TMF1P82094 1093 aa12.38□□□□□ -0.43
HLA-DOA-201ENST00000229829 MARF1Q9Y4F3 1742 aaKnown RBP12.37□□□□□ -0.43
HLA-DOA-201ENST00000229829 CRBNQ96SW2 442 aa12.37□□□□□ -0.43
HLA-DOA-201ENST00000229829 KIF1BO60333 1816 aa12.37□□□□□ -0.43
HLA-DOA-201ENST00000229829 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
HLA-DOA-201ENST00000229829 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.36□□□□□ -0.43
HLA-DOA-201ENST00000229829 SCAPERQ9BY12 1400 aa12.36□□□□□ -0.43
HLA-DOA-201ENST00000229829 TCERG1O14776 1098 aaKnown RBP12.36□□□□□ -0.43
HLA-DOA-201ENST00000229829 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
HLA-DOA-201ENST00000229829 WASHC2CQ9Y4E1 1318 aa12.35□□□□□ -0.43
HLA-DOA-201ENST00000229829 BLMP54132 1417 aaPredicted RBP12.35□□□□□ -0.43
HLA-DOA-201ENST00000229829 BACH2Q9BYV9 841 aa12.35□□□□□ -0.43
HLA-DOA-201ENST00000229829 ZFYVE9O95405 1425 aa12.34□□□□□ -0.43
HLA-DOA-201ENST00000229829 GLIPR1L2Q4G1C9 344 aa12.34□□□□□ -0.43
HLA-DOA-201ENST00000229829 TAOK2Q9UL54 1235 aa12.34□□□□□ -0.43
HLA-DOA-201ENST00000229829 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
HLA-DOA-201ENST00000229829 NKTRP30414 1462 aaKnown RBP12.32□□□□□ -0.44
HLA-DOA-201ENST00000229829 GSE1Q14687 1217 aa12.32□□□□□ -0.44
HLA-DOA-201ENST00000229829 PLEKHH1Q9ULM0 1364 aa12.31□□□□□ -0.44
HLA-DOA-201ENST00000229829 PPM1GO15355 546 aaPredicted RBP12.31□□□□□ -0.44
HLA-DOA-201ENST00000229829 KNSTRNQ9Y448 316 aa12.31□□□□□ -0.44
HLA-DOA-201ENST00000229829 FAM69CQ0P6D2 419 aa12.31□□□□□ -0.44
HLA-DOA-201ENST00000229829 FRAT1Q92837 279 aaPredicted RBP12.31□□□□□ -0.44
HLA-DOA-201ENST00000229829 AFAP1Q8N556 730 aa12.3□□□□□ -0.44
HLA-DOA-201ENST00000229829 AHDC1Q5TGY3 1603 aaPredicted RBP12.3□□□□□ -0.44
HLA-DOA-201ENST00000229829 NEXMIFQ5QGS0 1516 aa12.3□□□□□ -0.44
HLA-DOA-201ENST00000229829 MST1RQ04912 1400 aa12.3□□□□□ -0.44
HLA-DOA-201ENST00000229829 LRRC7Q96NW7 1537 aa12.29□□□□□ -0.44
HLA-DOA-201ENST00000229829 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
HLA-DOA-201ENST00000229829 ABCA3Q99758 1704 aa12.29□□□□□ -0.44
HLA-DOA-201ENST00000229829 NAP1L5Q96NT1 182 aaPredicted RBP12.29□□□□□ -0.44
HLA-DOA-201ENST00000229829 MS4A1P11836 297 aa12.28□□□□□ -0.44
HLA-DOA-201ENST00000229829 DUSP27Q5VZP5 1158 aa12.28□□□□□ -0.44
HLA-DOA-201ENST00000229829 WDR43Q15061 677 aaKnown RBP eCLIP12.28□□□□□ -0.44
HLA-DOA-201ENST00000229829 CCDC146Q8IYE0 955 aa12.28□□□□□ -0.44
HLA-DOA-201ENST00000229829 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
HLA-DOA-201ENST00000229829 CLTCL1P53675 1640 aa12.28□□□□□ -0.44
HLA-DOA-201ENST00000229829 NALCNQ8IZF0 1738 aa12.27□□□□□ -0.45
HLA-DOA-201ENST00000229829 INSRP06213 1382 aa12.26□□□□□ -0.45
HLA-DOA-201ENST00000229829 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
HLA-DOA-201ENST00000229829 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
HLA-DOA-201ENST00000229829 DLC1Q96QB1 1528 aa12.25□□□□□ -0.45
HLA-DOA-201ENST00000229829 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
HLA-DOA-201ENST00000229829 ZNF521Q96K83 1311 aa12.24□□□□□ -0.45
HLA-DOA-201ENST00000229829 GOLGA2Q08379 1002 aa12.24□□□□□ -0.45
HLA-DOA-201ENST00000229829 SPAG9O60271 1321 aaKnown RBP12.24□□□□□ -0.45
HLA-DOA-201ENST00000229829 KDM2BQ8NHM5 1336 aa12.24□□□□□ -0.45
HLA-DOA-201ENST00000229829 NFKBIBQ15653 356 aa12.24□□□□□ -0.45
HLA-DOA-201ENST00000229829 RSPH6AQ9H0K4 717 aa12.24□□□□□ -0.45
HLA-DOA-201ENST00000229829 MYOM2P54296 1465 aa12.23□□□□□ -0.45
HLA-DOA-201ENST00000229829 WNK3Q9BYP7 1800 aa12.23□□□□□ -0.45
HLA-DOA-201ENST00000229829 TPRNQ4KMQ1 711 aa12.23□□□□□ -0.45
HLA-DOA-201ENST00000229829 PODXL2Q9NZ53 605 aa12.23□□□□□ -0.45
HLA-DOA-201ENST00000229829 APAF1O14727 1248 aa12.23□□□□□ -0.45
HLA-DOA-201ENST00000229829 KLHL34Q8N239 644 aa12.23□□□□□ -0.45
HLA-DOA-201ENST00000229829 USP35Q9P2H5 1018 aa12.23□□□□□ -0.45
HLA-DOA-201ENST00000229829 PHRF1Q9P1Y6 1649 aaKnown RBP12.22□□□□□ -0.45
HLA-DOA-201ENST00000229829 CFAP70Q5T0N1 1121 aa12.22□□□□□ -0.45
HLA-DOA-201ENST00000229829 SCAF11Q99590 1463 aaKnown RBP12.22□□□□□ -0.45
HLA-DOA-201ENST00000229829 KIF1AQ12756 1690 aa12.22□□□□□ -0.45
HLA-DOA-201ENST00000229829 SLFN5Q08AF3 891 aa12.21□□□□□ -0.45
HLA-DOA-201ENST00000229829 DMRT2Q9Y5R5 561 aa12.21□□□□□ -0.45
HLA-DOA-201ENST00000229829 A0A0U1RQG5 324 aaPredicted RBP12.2□□□□□ -0.46
HLA-DOA-201ENST00000229829 BCAR3O75815 825 aa12.2□□□□□ -0.46
HLA-DOA-201ENST00000229829 ASXL1Q8IXJ9 1541 aa12.2□□□□□ -0.46
HLA-DOA-201ENST00000229829 RGPD3A6NKT7 1758 aaPredicted RBP12.2□□□□□ -0.46
HLA-DOA-201ENST00000229829 RGPD4Q7Z3J3 1758 aa12.2□□□□□ -0.46
HLA-DOA-201ENST00000229829 MED1Q15648 1581 aaPredicted RBP12.2□□□□□ -0.46
HLA-DOA-201ENST00000229829 CDCA8Q53HL2 280 aa12.2□□□□□ -0.46
HLA-DOA-201ENST00000229829 FMN2Q9NZ56 1722 aa12.2□□□□□ -0.46
HLA-DOA-201ENST00000229829 KIF3BO15066 747 aa12.19□□□□□ -0.46
HLA-DOA-201ENST00000229829 RGS3P49796 1198 aa12.19□□□□□ -0.46
HLA-DOA-201ENST00000229829 CARD14Q9BXL6 1004 aa12.19□□□□□ -0.46
HLA-DOA-201ENST00000229829 CENPQQ7L2Z9 268 aaPredicted RBP12.19□□□□□ -0.46
HLA-DOA-201ENST00000229829 COL24A1Q17RW2 1714 aa12.19□□□□□ -0.46
HLA-DOA-201ENST00000229829 MYOM1P52179 1685 aa12.19□□□□□ -0.46
HLA-DOA-201ENST00000229829 ADGRF5Q8IZF2 1346 aa12.18□□□□□ -0.46
HLA-DOA-201ENST00000229829 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
HLA-DOA-201ENST00000229829 CDC42BPGQ6DT37 1551 aa12.17□□□□□ -0.46
HLA-DOA-201ENST00000229829 FRAT2O75474 233 aaPredicted RBP12.17□□□□□ -0.46
HLA-DOA-201ENST00000229829 C8orf34Q49A92 452 aa12.17□□□□□ -0.46
HLA-DOA-201ENST00000229829 TECPR2O15040 1411 aa12.17□□□□□ -0.46
HLA-DOA-201ENST00000229829 PIK3C2GO75747 1445 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms