RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 KCNJ4P48050 445 aa10.11□□□□□ -0.79
NANOG-201ENST00000229307 GORABQ5T7V8 394 aa10.11□□□□□ -0.79
NANOG-201ENST00000229307 TATP17735 454 aaPredicted RBP10.11□□□□□ -0.79
NANOG-201ENST00000229307 IRX6P78412 446 aaPredicted RBP10.11□□□□□ -0.79
NANOG-201ENST00000229307 BECN1Q14457 450 aa10.11□□□□□ -0.79
NANOG-201ENST00000229307 KCNH5Q8NCM2 988 aa10.11□□□□□ -0.79
NANOG-201ENST00000229307 GPATCH3Q96I76 525 aa10.11□□□□□ -0.79
NANOG-201ENST00000229307 NEXNQ0ZGT2 675 aa10.11□□□□□ -0.79
NANOG-201ENST00000229307 IDI1Q13907 227 aa10.11□□□□□ -0.79
NANOG-201ENST00000229307 CADPS2Q86UW7 1296 aa10.1□□□□□ -0.79
NANOG-201ENST00000229307 CCDC146Q8IYE0 955 aa10.1□□□□□ -0.79
NANOG-201ENST00000229307 PRDM11Q9NQV5 511 aa10.1□□□□□ -0.79
NANOG-201ENST00000229307 AMOTL2Q9Y2J4 779 aa10.1□□□□□ -0.79
NANOG-201ENST00000229307 DDX58O95786 925 aaKnown RBP10.1□□□□□ -0.79
NANOG-201ENST00000229307 STRN4Q9NRL3 753 aa10.1□□□□□ -0.79
NANOG-201ENST00000229307 GGNBP2Q9H3C7 697 aa10.1□□□□□ -0.79
NANOG-201ENST00000229307 SAMD9LQ8IVG5 1584 aa10.1□□□□□ -0.79
NANOG-201ENST00000229307 MSH6P52701 1360 aa10.1□□□□□ -0.79
NANOG-201ENST00000229307 GAS2L2Q8NHY3 880 aa10.09□□□□□ -0.79
NANOG-201ENST00000229307 ANP32BQ92688 251 aaKnown RBP10.09□□□□□ -0.79
NANOG-201ENST00000229307 ITPRIPQ8IWB1 547 aa10.09□□□□□ -0.79
NANOG-201ENST00000229307 MADDQ8WXG6 1647 aa10.09□□□□□ -0.79
NANOG-201ENST00000229307 FGD1P98174 961 aa10.09□□□□□ -0.79
NANOG-201ENST00000229307 TOM1L2Q6ZVM7 507 aa10.09□□□□□ -0.79
NANOG-201ENST00000229307 SUPT16HQ9Y5B9 1047 aaKnown RBP10.09□□□□□ -0.79
NANOG-201ENST00000229307 CCDC61Q9Y6R9 512 aa10.09□□□□□ -0.79
NANOG-201ENST00000229307 PPRC1Q5VV67 1664 aaKnown RBP10.09□□□□□ -0.79
NANOG-201ENST00000229307 CABP1Q9NZU7 370 aa10.08□□□□□ -0.8
NANOG-201ENST00000229307 MCCP23508 829 aa10.07□□□□□ -0.8
NANOG-201ENST00000229307 NUDT16Q96DE0 195 aaKnown RBP10.07□□□□□ -0.8
NANOG-201ENST00000229307 SPG7Q9UQ90 795 aa10.07□□□□□ -0.8
NANOG-201ENST00000229307 CCDC7Q96M83 1385 aa10.07□□□□□ -0.8
NANOG-201ENST00000229307 RWDD1Q9H446 243 aaPredicted RBP10.07□□□□□ -0.8
NANOG-201ENST00000229307 SLC4A10Q6U841 1118 aa10.07□□□□□ -0.8
NANOG-201ENST00000229307 E9PSI1 815 aa10.06□□□□□ -0.8
NANOG-201ENST00000229307 HSP90AB1P08238 724 aaKnown RBP10.06□□□□□ -0.8
NANOG-201ENST00000229307 HSP90B1P14625 803 aaKnown RBP10.06□□□□□ -0.8
NANOG-201ENST00000229307 RUNDC1Q96C34 613 aa10.06□□□□□ -0.8
NANOG-201ENST00000229307 DDRGK1Q96HY6 314 aa10.06□□□□□ -0.8
NANOG-201ENST00000229307 RCAN3Q9UKA8 241 aa10.06□□□□□ -0.8
NANOG-201ENST00000229307 ILDR1Q86SU0 546 aaPredicted RBP10.06□□□□□ -0.8
NANOG-201ENST00000229307 NLRP1Q9C000 1473 aa10.06□□□□□ -0.8
NANOG-201ENST00000229307 PPP4R2Q9NY27 417 aa10.06□□□□□ -0.8
NANOG-201ENST00000229307 BCORL1Q5H9F3 1711 aa10.06□□□□□ -0.8
NANOG-201ENST00000229307 NCLP19338 710 aaKnown RBP10.06□□□□□ -0.8
NANOG-201ENST00000229307 PHF8Q9UPP1 1060 aa10.06□□□□□ -0.8
NANOG-201ENST00000229307 GNAI1P63096 354 aa10.05□□□□□ -0.8
NANOG-201ENST00000229307 NBPF1Q3BBV0 1214 aa10.05□□□□□ -0.8
NANOG-201ENST00000229307 SHANK2Q9UPX8 1470 aa10.05□□□□□ -0.8
NANOG-201ENST00000229307 KDM5CP41229 1560 aa10.05□□□□□ -0.8
NANOG-201ENST00000229307 KIF7Q2M1P5 1343 aa10.05□□□□□ -0.8
NANOG-201ENST00000229307 RIPK4P57078 832 aa10.05□□□□□ -0.8
NANOG-201ENST00000229307 USP35Q9P2H5 1018 aa10.05□□□□□ -0.8
NANOG-201ENST00000229307 KDM5DQ9BY66 1539 aa10.05□□□□□ -0.8
NANOG-201ENST00000229307 FRAT2O75474 233 aaPredicted RBP10.04□□□□□ -0.8
NANOG-201ENST00000229307 PRKRIP1Q9H875 184 aaPredicted RBP10.04□□□□□ -0.8
NANOG-201ENST00000229307 FER1L4A9Z1Z3 1794 aa10.04□□□□□ -0.8
NANOG-201ENST00000229307 DIP2CQ9Y2E4 1556 aa10.04□□□□□ -0.8
NANOG-201ENST00000229307 PTPRTO14522 1441 aa10.04□□□□□ -0.8
NANOG-201ENST00000229307 ARHGEF5Q12774 1597 aa10.04□□□□□ -0.8
NANOG-201ENST00000229307 KIAA1211Q6ZU35 1233 aa10.03□□□□□ -0.8
NANOG-201ENST00000229307 RRP7AQ9Y3A4 280 aaKnown RBP10.03□□□□□ -0.8
NANOG-201ENST00000229307 TSPYL4Q9UJ04 414 aa10.03□□□□□ -0.8
NANOG-201ENST00000229307 ARHGEF12Q9NZN5 1544 aa10.03□□□□□ -0.8
NANOG-201ENST00000229307 EIF2S2P20042 333 aaKnown RBP10.03□□□□□ -0.8
NANOG-201ENST00000229307 PNISRQ8TF01 805 aaKnown RBP10.03□□□□□ -0.8
NANOG-201ENST00000229307 RIMS2Q9UQ26 1411 aa10.03□□□□□ -0.8
NANOG-201ENST00000229307 A2ML1A8K2U0 1454 aa10.02□□□□□ -0.8
NANOG-201ENST00000229307 NOS1P29475 1434 aa10.02□□□□□ -0.8
NANOG-201ENST00000229307 RICTORQ6R327 1708 aa10.02□□□□□ -0.8
NANOG-201ENST00000229307 ADGBQ8N7X0 1667 aa10.02□□□□□ -0.81
NANOG-201ENST00000229307 SETD1BQ9UPS6 1966 aaKnown RBP10.02□□□□□ -0.81
NANOG-201ENST00000229307 REREQ9P2R6 1566 aa10.02□□□□□ -0.81
NANOG-201ENST00000229307 WASLO00401 505 aaPredicted RBP10.02□□□□□ -0.81
NANOG-201ENST00000229307 ISY1Q9ULR0 285 aaKnown RBP10.02□□□□□ -0.81
NANOG-201ENST00000229307 C14orf93Q9H972 538 aaKnown RBP10.01□□□□□ -0.81
NANOG-201ENST00000229307 SLC12A5Q9H2X9 1139 aa10.01□□□□□ -0.81
NANOG-201ENST00000229307 TCOF1Q13428 1488 aaKnown RBP10.01□□□□□ -0.81
NANOG-201ENST00000229307 PTPRKQ15262 1439 aa10.01□□□□□ -0.81
NANOG-201ENST00000229307 GOLGA6L22H0YM25 854 aa10.01□□□□□ -0.81
NANOG-201ENST00000229307 HMOX1P09601 288 aa10.01□□□□□ -0.81
NANOG-201ENST00000229307 RGS3P49796 1198 aa10.01□□□□□ -0.81
NANOG-201ENST00000229307 API5Q9BZZ5 524 aaKnown RBP10.01□□□□□ -0.81
NANOG-201ENST00000229307 MTHFSP49914 203 aa10.01□□□□□ -0.81
NANOG-201ENST00000229307 WAPLQ7Z5K2 1190 aa10.01□□□□□ -0.81
NANOG-201ENST00000229307 NGLY1Q96IV0 654 aa10.01□□□□□ -0.81
NANOG-201ENST00000229307 NPHP4O75161 1426 aaPredicted RBP10□□□□□ -0.81
NANOG-201ENST00000229307 CDK11BP21127 795 aaKnown RBP10□□□□□ -0.81
NANOG-201ENST00000229307 C9orf78Q9NZ63 289 aaPredicted RBP10□□□□□ -0.81
NANOG-201ENST00000229307 NINLQ9Y2I6 1382 aa10□□□□□ -0.81
NANOG-201ENST00000229307 CABP4P57796 275 aa10□□□□□ -0.81
NANOG-201ENST00000229307 LRRFIP1Q32MZ4 808 aaKnown RBP10□□□□□ -0.81
NANOG-201ENST00000229307 KLHL34Q8N239 644 aa10□□□□□ -0.81
NANOG-201ENST00000229307 PZPP20742 1482 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 ERICH6BQ5W0A0 696 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 KIF6Q6ZMV9 814 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 KRT28Q7Z3Y7 464 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 NAP1L2Q9ULW6 460 aaPredicted RBP9.99□□□□□ -0.81
NANOG-201ENST00000229307 APBB1O00213 710 aa9.99□□□□□ -0.81
NANOG-201ENST00000229307 XPCQ01831 940 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms