RNA–Protein interactions for RNA: ENST00000229022.7

VDR-201, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VDR, Length 4,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-201ENST00000229022 TOPBP1Q92547 1522 aa15.85■□□□□ 0.13
VDR-201ENST00000229022 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
VDR-201ENST00000229022 NBPF8Q3BBV2 869 aa15.84■□□□□ 0.13
VDR-201ENST00000229022 UBTFL1P0CB47 393 aaPredicted RBP15.83■□□□□ 0.13
VDR-201ENST00000229022 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.13
VDR-201ENST00000229022 TPD52L1Q16890 204 aaPredicted RBP15.83■□□□□ 0.12
VDR-201ENST00000229022 MCTP1Q6DN14 999 aa15.83■□□□□ 0.12
VDR-201ENST00000229022 AMOTL1Q8IY63 956 aa15.83■□□□□ 0.12
VDR-201ENST00000229022 HECW1Q76N89 1606 aa15.83■□□□□ 0.12
VDR-201ENST00000229022 NBPF1Q3BBV0 1214 aa15.83■□□□□ 0.12
VDR-201ENST00000229022 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
VDR-201ENST00000229022 RPGRIP1LQ68CZ1 1315 aa15.82■□□□□ 0.12
VDR-201ENST00000229022 NLRP6P59044 892 aa15.82■□□□□ 0.12
VDR-201ENST00000229022 WDR63Q8IWG1 891 aa15.82■□□□□ 0.12
VDR-201ENST00000229022 GCC1Q96CN9 775 aa15.82■□□□□ 0.12
VDR-201ENST00000229022 CDCA7LQ96GN5 454 aa15.82■□□□□ 0.12
VDR-201ENST00000229022 HOOK1Q9UJC3 728 aaKnown RBP15.82■□□□□ 0.12
VDR-201ENST00000229022 CCDC30Q5VVM6 783 aa15.82■□□□□ 0.12
VDR-201ENST00000229022 MCM2P49736 904 aa15.81■□□□□ 0.12
VDR-201ENST00000229022 NOL10Q9BSC4 688 aaKnown RBP15.81■□□□□ 0.12
VDR-201ENST00000229022 WWC1Q8IX03 1113 aa15.81■□□□□ 0.12
VDR-201ENST00000229022 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
VDR-201ENST00000229022 ANKRD30BQ9BXX2 1392 aa15.81■□□□□ 0.12
VDR-201ENST00000229022 NECTIN2Q92692 538 aa15.81■□□□□ 0.12
VDR-201ENST00000229022 TPM2P07951 284 aa15.8■□□□□ 0.12
VDR-201ENST00000229022 DAPK1P53355 1430 aa15.8■□□□□ 0.12
VDR-201ENST00000229022 CREBRFQ8IUR6 639 aa15.8■□□□□ 0.12
VDR-201ENST00000229022 CLASRPQ8N2M8 674 aaKnown RBP15.8■□□□□ 0.12
VDR-201ENST00000229022 PRKAR2BP31323 418 aa15.79■□□□□ 0.12
VDR-201ENST00000229022 ZNF428Q96B54 188 aa15.79■□□□□ 0.12
VDR-201ENST00000229022 FOXD4L6Q3SYB3 417 aaPredicted RBP15.79■□□□□ 0.12
VDR-201ENST00000229022 FOXD4L3Q6VB84 417 aaPredicted RBP15.79■□□□□ 0.12
VDR-201ENST00000229022 BICD2Q8TD16 824 aa15.79■□□□□ 0.12
VDR-201ENST00000229022 ANKRD20A12PQ8NF67 263 aa15.79■□□□□ 0.12
VDR-201ENST00000229022 CCDC47Q96A33 483 aaKnown RBP15.79■□□□□ 0.12
VDR-201ENST00000229022 CEP89Q96ST8 783 aa15.79■□□□□ 0.12
VDR-201ENST00000229022 EXOSC9Q06265 439 aaKnown RBP15.78■□□□□ 0.12
VDR-201ENST00000229022 NFKBIBQ15653 356 aa15.78■□□□□ 0.12
VDR-201ENST00000229022 RIC3Q7Z5B4 369 aa15.78■□□□□ 0.12
VDR-201ENST00000229022 APPP05067 770 aa15.78■□□□□ 0.12
VDR-201ENST00000229022 HSP90AA2PQ14568 343 aaPredicted RBP15.78■□□□□ 0.12
VDR-201ENST00000229022 SMG6Q86US8 1419 aaKnown RBP15.78■□□□□ 0.12
VDR-201ENST00000229022 PSMA5P28066 241 aa15.78■□□□□ 0.12
VDR-201ENST00000229022 ATF3P18847 181 aa15.78■□□□□ 0.12
VDR-201ENST00000229022 GPRASP1Q5JY77 1395 aa15.77■□□□□ 0.12
VDR-201ENST00000229022 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.77■□□□□ 0.12
VDR-201ENST00000229022 VPS37CA5D8V6 355 aaPredicted RBP15.77■□□□□ 0.12
VDR-201ENST00000229022 TWISTNBQ3B726 338 aaPredicted RBP15.77■□□□□ 0.12
VDR-201ENST00000229022 CNTROBQ8N137 903 aa15.77■□□□□ 0.11
VDR-201ENST00000229022 SUPT6HQ7KZ85 1726 aaKnown RBP15.77■□□□□ 0.11
VDR-201ENST00000229022 MRE11P49959 708 aa15.76■□□□□ 0.11
VDR-201ENST00000229022 ERBINQ96RT1 1412 aa15.76■□□□□ 0.11
VDR-201ENST00000229022 PRAM1Q96QH2 718 aa15.76■□□□□ 0.11
VDR-201ENST00000229022 SLC12A5Q9H2X9 1139 aa15.76■□□□□ 0.11
VDR-201ENST00000229022 NAIPQ13075 1403 aa15.76■□□□□ 0.11
VDR-201ENST00000229022 PES1O00541 588 aaKnown RBP15.76■□□□□ 0.11
VDR-201ENST00000229022 IPO7O95373 1038 aaKnown RBP15.76■□□□□ 0.11
VDR-201ENST00000229022 CCDC73Q6ZRK6 1079 aa15.76■□□□□ 0.11
VDR-201ENST00000229022 KIAA0586Q9BVV6 1533 aa15.75■□□□□ 0.11
VDR-201ENST00000229022 HIP1O00291 1037 aa15.75■□□□□ 0.11
VDR-201ENST00000229022 RABEP1Q15276 862 aa15.75■□□□□ 0.11
VDR-201ENST00000229022 ERICH2A1L162 156 aa15.75■□□□□ 0.11
VDR-201ENST00000229022 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
VDR-201ENST00000229022 RALYLQ86SE5 291 aaKnown RBP15.75■□□□□ 0.11
VDR-201ENST00000229022 PDZRN3Q9UPQ7 1066 aa15.75■□□□□ 0.11
VDR-201ENST00000229022 MBD3O95983 291 aa15.75■□□□□ 0.11
VDR-201ENST00000229022 SAFBQ15424 915 aaKnown RBP eCLIP15.75■□□□□ 0.11
VDR-201ENST00000229022 PLEKHO1Q53GL0 409 aaPredicted RBP15.75■□□□□ 0.11
VDR-201ENST00000229022 NLRP2Q9NX02 1062 aa15.75■□□□□ 0.11
VDR-201ENST00000229022 SASS6Q6UVJ0 657 aa15.75■□□□□ 0.11
VDR-201ENST00000229022 ATAD2Q6PL18 1390 aa15.74■□□□□ 0.11
VDR-201ENST00000229022 PDCP20941 246 aa15.74■□□□□ 0.11
VDR-201ENST00000229022 GPS2Q13227 327 aa15.74■□□□□ 0.11
VDR-201ENST00000229022 VPS37DQ86XT2 251 aa15.74■□□□□ 0.11
VDR-201ENST00000229022 ERC1Q8IUD2 1116 aa15.74■□□□□ 0.11
VDR-201ENST00000229022 CCDC70Q6NSX1 233 aa15.73■□□□□ 0.11
VDR-201ENST00000229022 TXNDC2Q86VQ3 553 aa15.73■□□□□ 0.11
VDR-201ENST00000229022 MAP3K1Q13233 1512 aa15.73■□□□□ 0.11
VDR-201ENST00000229022 SURF6O75683 361 aaKnown RBP15.73■□□□□ 0.11
VDR-201ENST00000229022 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.73■□□□□ 0.11
VDR-201ENST00000229022 ARID3AQ99856 593 aa15.73■□□□□ 0.11
VDR-201ENST00000229022 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.72■□□□□ 0.11
VDR-201ENST00000229022 GNAI2P04899 355 aa15.72■□□□□ 0.11
VDR-201ENST00000229022 A0A0U1RQG5 324 aaPredicted RBP15.72■□□□□ 0.11
VDR-201ENST00000229022 CCT4P50991 539 aaKnown RBP15.72■□□□□ 0.11
VDR-201ENST00000229022 NESP48681 1621 aa15.72■□□□□ 0.11
VDR-201ENST00000229022 EPRSP07814 1512 aaKnown RBP15.72■□□□□ 0.11
VDR-201ENST00000229022 VPS53Q5VIR6 699 aa15.72■□□□□ 0.11
VDR-201ENST00000229022 ATF7IPQ6VMQ6 1270 aa15.72■□□□□ 0.11
VDR-201ENST00000229022 ABTB2Q8N961 1025 aa15.72■□□□□ 0.11
VDR-201ENST00000229022 NFXL1Q6ZNB6 911 aa15.71■□□□□ 0.11
VDR-201ENST00000229022 BACH2Q9BYV9 841 aa15.71■□□□□ 0.11
VDR-201ENST00000229022 LETM1O95202 739 aaPredicted RBP15.71■□□□□ 0.11
VDR-201ENST00000229022 TNNT3P45378 269 aaPredicted RBP15.71■□□□□ 0.11
VDR-201ENST00000229022 ABCA10Q8WWZ4 1543 aa15.71■□□□□ 0.11
VDR-201ENST00000229022 NEUROD6Q96NK8 337 aa15.71■□□□□ 0.1
VDR-201ENST00000229022 THEMISQ8N1K5 641 aaPredicted RBP15.7■□□□□ 0.1
VDR-201ENST00000229022 FAM43AQ8N2R8 423 aa15.7■□□□□ 0.1
VDR-201ENST00000229022 CDK19Q9BWU1 502 aa15.7■□□□□ 0.1
VDR-201ENST00000229022 FCHSD2O94868 740 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms