RNA–Protein interactions for RNA: ENST00000228955.11

GTF2H3-201, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2 BASIC

Gene GTF2H3, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-201ENST00000228955 PLEKHH1Q9ULM0 1364 aa10.12□□□□□ -0.79
GTF2H3-201ENST00000228955 LRP6O75581 1613 aa10.11□□□□□ -0.79
GTF2H3-201ENST00000228955 HIRIP3Q9BW71 556 aaPredicted RBP10.1□□□□□ -0.79
GTF2H3-201ENST00000228955 NALCNQ8IZF0 1738 aa10.1□□□□□ -0.79
GTF2H3-201ENST00000228955 XRN1Q8IZH2 1706 aaKnown RBP10.1□□□□□ -0.79
GTF2H3-201ENST00000228955 MST1RQ04912 1400 aa10.1□□□□□ -0.79
GTF2H3-201ENST00000228955 COL16A1Q07092 1604 aaPredicted RBP10.1□□□□□ -0.79
GTF2H3-201ENST00000228955 PPLO60437 1756 aa10.1□□□□□ -0.79
GTF2H3-201ENST00000228955 RPGRIP1LQ68CZ1 1315 aa10.09□□□□□ -0.79
GTF2H3-201ENST00000228955 ASXL1Q8IXJ9 1541 aa10.09□□□□□ -0.79
GTF2H3-201ENST00000228955 SETD1AO15047 1707 aaKnown RBP10.09□□□□□ -0.79
GTF2H3-201ENST00000228955 FOXO3O43524 673 aa10.09□□□□□ -0.79
GTF2H3-201ENST00000228955 DCAF11Q8TEB1 546 aa10.09□□□□□ -0.79
GTF2H3-201ENST00000228955 LMOD2Q6P5Q4 547 aa10.08□□□□□ -0.8
GTF2H3-201ENST00000228955 TRAK1Q9UPV9 953 aa10.08□□□□□ -0.8
GTF2H3-201ENST00000228955 ADGRL3Q9HAR2 1447 aa10.08□□□□□ -0.8
GTF2H3-201ENST00000228955 AFF2P51816 1311 aa10.07□□□□□ -0.8
GTF2H3-201ENST00000228955 C1orf167Q5SNV9 1468 aa10.07□□□□□ -0.8
GTF2H3-201ENST00000228955 SPATA31E1Q6ZUB1 1445 aa10.06□□□□□ -0.8
GTF2H3-201ENST00000228955 NCOA3Q9Y6Q9 1424 aa10.06□□□□□ -0.8
GTF2H3-201ENST00000228955 LRRC59Q96AG4 307 aaKnown RBP10.06□□□□□ -0.8
GTF2H3-201ENST00000228955 NGLY1Q96IV0 654 aa10.06□□□□□ -0.8
GTF2H3-201ENST00000228955 PRAM1Q96QH2 718 aa10.06□□□□□ -0.8
GTF2H3-201ENST00000228955 FOXD4L1Q9NU39 408 aa10.06□□□□□ -0.8
GTF2H3-201ENST00000228955 POGKQ9P215 609 aa10.06□□□□□ -0.8
GTF2H3-201ENST00000228955 PMFBP1Q8TBY8 1022 aa10.05□□□□□ -0.8
GTF2H3-201ENST00000228955 MINK1Q8N4C8 1332 aaPredicted RBP10.05□□□□□ -0.8
GTF2H3-201ENST00000228955 SPATA31A6Q5VVP1 1343 aa10.04□□□□□ -0.8
GTF2H3-201ENST00000228955 AHDC1Q5TGY3 1603 aaPredicted RBP10.04□□□□□ -0.8
GTF2H3-201ENST00000228955 CABLES1Q8TDN4 633 aa10.04□□□□□ -0.8
GTF2H3-201ENST00000228955 QTRT2Q9H974 415 aaKnown RBP10.04□□□□□ -0.8
GTF2H3-201ENST00000228955 PNPLA6Q8IY17 1366 aa10.03□□□□□ -0.8
GTF2H3-201ENST00000228955 ANKRD30BQ9BXX2 1392 aa10.03□□□□□ -0.8
GTF2H3-201ENST00000228955 RXRBP28702 533 aa10.03□□□□□ -0.8
GTF2H3-201ENST00000228955 NEUROD1Q13562 356 aa10.03□□□□□ -0.8
GTF2H3-201ENST00000228955 YTHDC2Q9H6S0 1430 aaKnown RBP10.02□□□□□ -0.8
GTF2H3-201ENST00000228955 LRPPRCP42704 1394 aaKnown RBP10.02□□□□□ -0.81
GTF2H3-201ENST00000228955 HAP1P54257 671 aaPredicted RBP10.02□□□□□ -0.81
GTF2H3-201ENST00000228955 ZNF772Q68DY9 489 aaPredicted RBP10.02□□□□□ -0.81
GTF2H3-201ENST00000228955 C14orf93Q9H972 538 aaKnown RBP10.02□□□□□ -0.81
GTF2H3-201ENST00000228955 DCCP43146 1447 aa10.02□□□□□ -0.81
GTF2H3-201ENST00000228955 PTCH1Q13635 1447 aa10.02□□□□□ -0.81
GTF2H3-201ENST00000228955 ZBTB22O15209 634 aa10.01□□□□□ -0.81
GTF2H3-201ENST00000228955 MYCNP04198 464 aaPredicted RBP10.01□□□□□ -0.81
GTF2H3-201ENST00000228955 PIK3C2GO75747 1445 aa10.01□□□□□ -0.81
GTF2H3-201ENST00000228955 DHX57Q6P158 1386 aaKnown RBP10□□□□□ -0.81
GTF2H3-201ENST00000228955 DSG3P32926 999 aa10□□□□□ -0.81
GTF2H3-201ENST00000228955 KRT28Q7Z3Y7 464 aa10□□□□□ -0.81
GTF2H3-201ENST00000228955 SIN3AQ96ST3 1273 aa10□□□□□ -0.81
GTF2H3-201ENST00000228955 IFT172Q9UG01 1749 aa10□□□□□ -0.81
GTF2H3-201ENST00000228955 NHSL1Q5SYE7 1610 aa10□□□□□ -0.81
GTF2H3-201ENST00000228955 SHPRHQ149N8 1683 aa9.99□□□□□ -0.81
GTF2H3-201ENST00000228955 NUTM2GQ5VZR2 741 aa9.99□□□□□ -0.81
GTF2H3-201ENST00000228955 USP21Q9UK80 565 aa9.99□□□□□ -0.81
GTF2H3-201ENST00000228955 RGPD8O14715 1765 aaPredicted RBP9.98□□□□□ -0.81
GTF2H3-201ENST00000228955 CAPN15O75808 1086 aa9.98□□□□□ -0.81
GTF2H3-201ENST00000228955 PAK3O75914 559 aaPredicted RBP9.98□□□□□ -0.81
GTF2H3-201ENST00000228955 PSME1Q06323 249 aa9.98□□□□□ -0.81
GTF2H3-201ENST00000228955 SPINK5Q9NQ38 1064 aaPredicted RBP9.98□□□□□ -0.81
GTF2H3-201ENST00000228955 PHF8Q9UPP1 1060 aa9.98□□□□□ -0.81
GTF2H3-201ENST00000228955 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
GTF2H3-201ENST00000228955 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
GTF2H3-201ENST00000228955 NPHP3Q7Z494 1330 aa9.97□□□□□ -0.81
GTF2H3-201ENST00000228955 ABCC11Q96J66 1382 aa9.97□□□□□ -0.81
GTF2H3-201ENST00000228955 NBPF1Q3BBV0 1214 aa9.97□□□□□ -0.81
GTF2H3-201ENST00000228955 SAMD1Q6SPF0 538 aaPredicted RBP9.96□□□□□ -0.82
GTF2H3-201ENST00000228955 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.822e-8■■■□□ 15.9
GTF2H3-201ENST00000228955 A0A0G2JS52 829 aa9.95□□□□□ -0.82
GTF2H3-201ENST00000228955 MYT1Q01538 1121 aa9.95□□□□□ -0.82
GTF2H3-201ENST00000228955 ZBTB7CA1YPR0 619 aa9.94□□□□□ -0.82
GTF2H3-201ENST00000228955 RBM6P78332 1123 aaKnown RBP9.94□□□□□ -0.82
GTF2H3-201ENST00000228955 NGDNQ8NEJ9 315 aaKnown RBP9.94□□□□□ -0.82
GTF2H3-201ENST00000228955 PXDNQ92626 1479 aa9.94□□□□□ -0.82
GTF2H3-201ENST00000228955 CDC42BPGQ6DT37 1551 aa9.94□□□□□ -0.82
GTF2H3-201ENST00000228955 PRR36Q9H6K5 1346 aa9.93□□□□□ -0.82
GTF2H3-201ENST00000228955 RGS12O14924 1447 aa9.93□□□□□ -0.82
GTF2H3-201ENST00000228955 SPATA31A3Q5VYP0 1347 aa9.92□□□□□ -0.82
GTF2H3-201ENST00000228955 TECPR2O15040 1411 aa9.92□□□□□ -0.82
GTF2H3-201ENST00000228955 MYOM2P54296 1465 aa9.92□□□□□ -0.82
GTF2H3-201ENST00000228955 FMN2Q9NZ56 1722 aa9.92□□□□□ -0.82
GTF2H3-201ENST00000228955 NRXN1Q9ULB1 1477 aa9.92□□□□□ -0.82
GTF2H3-201ENST00000228955 WASLO00401 505 aaPredicted RBP9.91□□□□□ -0.82
GTF2H3-201ENST00000228955 CDK19Q9BWU1 502 aa9.91□□□□□ -0.82
GTF2H3-201ENST00000228955 TRPC5Q9UL62 973 aaPredicted RBP9.91□□□□□ -0.82
GTF2H3-201ENST00000228955 KNDC1Q76NI1 1749 aa9.91□□□□□ -0.82
GTF2H3-201ENST00000228955 CHRNA2Q15822 529 aa9.91□□□□□ -0.82
GTF2H3-201ENST00000228955 FAM182BQ5T319 152 aa9.91□□□□□ -0.82
GTF2H3-201ENST00000228955 L3MBTL2Q969R5 705 aa9.91□□□□□ -0.82
GTF2H3-201ENST00000228955 CABP2Q9NPB3 220 aa9.91□□□□□ -0.82
GTF2H3-201ENST00000228955 FAM83GA6ND36 823 aa9.9□□□□□ -0.83
GTF2H3-201ENST00000228955 SRPK2P78362 688 aaKnown RBP9.9□□□□□ -0.83
GTF2H3-201ENST00000228955 NUDT16Q96DE0 195 aaKnown RBP9.9□□□□□ -0.83
GTF2H3-201ENST00000228955 ADGRB1O14514 1584 aa9.89□□□□□ -0.83
GTF2H3-201ENST00000228955 SOX12O15370 315 aa9.89□□□□□ -0.83
GTF2H3-201ENST00000228955 ZC3H6P61129 1189 aaKnown RBP9.89□□□□□ -0.83
GTF2H3-201ENST00000228955 SIRT1Q96EB6 747 aa9.89□□□□□ -0.83
GTF2H3-201ENST00000228955 USP32Q8NFA0 1604 aa9.88□□□□□ -0.83
GTF2H3-201ENST00000228955 UNC5CLQ8IV45 518 aa9.88□□□□□ -0.83
GTF2H3-201ENST00000228955 FNBP4Q8N3X1 1017 aaPredicted RBP9.88□□□□□ -0.83
GTF2H3-201ENST00000228955 GJD4Q96KN9 370 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms