RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 EFCAB6Q5THR3 1501 aa18.02■□□□□ 0.48
SF1-201ENST00000227503 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
SF1-201ENST00000227503 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.02■□□□□ 0.48
SF1-201ENST00000227503 PANK1Q8TE04 598 aa18.02■□□□□ 0.48
SF1-201ENST00000227503 IFT172Q9UG01 1749 aa18.02■□□□□ 0.47
SF1-201ENST00000227503 COG6Q9Y2V7 657 aa18.01■□□□□ 0.47
SF1-201ENST00000227503 NRXN1Q9ULB1 1477 aa18.01■□□□□ 0.47
SF1-201ENST00000227503 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
SF1-201ENST00000227503 KIF1BO60333 1816 aa18■□□□□ 0.47
SF1-201ENST00000227503 VIRMAQ69YN4 1812 aaKnown RBP18■□□□□ 0.47
SF1-201ENST00000227503 MROH2AA6NES4 1674 aa17.99■□□□□ 0.47
SF1-201ENST00000227503 APAF1O14727 1248 aa17.99■□□□□ 0.47
SF1-201ENST00000227503 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
SF1-201ENST00000227503 FSD2A1L4K1 749 aa17.98■□□□□ 0.47
SF1-201ENST00000227503 RRP9O43818 475 aaKnown RBP17.98■□□□□ 0.47
SF1-201ENST00000227503 NLRP1Q9C000 1473 aa17.98■□□□□ 0.47
SF1-201ENST00000227503 MYO3AQ8NEV4 1616 aa17.98■□□□□ 0.47
SF1-201ENST00000227503 LMTK2Q8IWU2 1503 aa17.98■□□□□ 0.47
SF1-201ENST00000227503 SBNO2Q9Y2G9 1366 aa17.97■□□□□ 0.47
SF1-201ENST00000227503 MCM4P33991 863 aa17.97■□□□□ 0.47
SF1-201ENST00000227503 KIDINS220Q9ULH0 1771 aa17.97■□□□□ 0.47
SF1-201ENST00000227503 NKTRP30414 1462 aaKnown RBP17.96■□□□□ 0.47
SF1-201ENST00000227503 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.47
SF1-201ENST00000227503 TNNQ9UQP3 1299 aa17.96■□□□□ 0.47
SF1-201ENST00000227503 ASXL2Q76L83 1435 aa17.95■□□□□ 0.46
SF1-201ENST00000227503 TRAK2O60296 914 aa17.95■□□□□ 0.46
SF1-201ENST00000227503 ADGRB3O60242 1522 aa17.95■□□□□ 0.46
SF1-201ENST00000227503 NOS1P29475 1434 aa17.94■□□□□ 0.46
SF1-201ENST00000227503 E9PSI1 815 aa17.93■□□□□ 0.46
SF1-201ENST00000227503 SETBP1Q9Y6X0 1596 aa17.93■□□□□ 0.46
SF1-201ENST00000227503 POLR3AO14802 1390 aaPredicted RBP17.93■□□□□ 0.46
SF1-201ENST00000227503 ESPNB1AK53 854 aa17.92■□□□□ 0.46
SF1-201ENST00000227503 NGEFQ8N5V2 710 aa17.92■□□□□ 0.46
SF1-201ENST00000227503 CENPJQ9HC77 1338 aaPredicted RBP17.91■□□□□ 0.46
SF1-201ENST00000227503 CLUAP1Q96AJ1 413 aa17.91■□□□□ 0.46
SF1-201ENST00000227503 TBC1D32Q96NH3 1257 aa17.91■□□□□ 0.46
SF1-201ENST00000227503 BCL2L13Q9BXK5 485 aa17.91■□□□□ 0.46
SF1-201ENST00000227503 MYH16Q9H6N6 1097 aa17.91■□□□□ 0.46
SF1-201ENST00000227503 ZNF518AQ6AHZ1 1483 aa17.91■□□□□ 0.46
SF1-201ENST00000227503 GRPEL1Q9HAV7 217 aa17.9■□□□□ 0.46
SF1-201ENST00000227503 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.46
SF1-201ENST00000227503 NPATQ14207 1427 aa17.88■□□□□ 0.45
SF1-201ENST00000227503 C14orf93Q9H972 538 aaKnown RBP17.88■□□□□ 0.45
SF1-201ENST00000227503 PCDHB15Q9Y5E8 787 aa17.88■□□□□ 0.45
SF1-201ENST00000227503 MFAP1P55081 439 aaKnown RBP17.88■□□□□ 0.45
SF1-201ENST00000227503 NEUROD2Q15784 382 aa17.88■□□□□ 0.45
SF1-201ENST00000227503 MAPK8IP3Q9UPT6 1336 aa17.88■□□□□ 0.45
SF1-201ENST00000227503 NSD3Q9BZ95 1437 aa17.88■□□□□ 0.45
SF1-201ENST00000227503 ADGRB1O14514 1584 aa17.87■□□□□ 0.45
SF1-201ENST00000227503 PDZRN3Q9UPQ7 1066 aa17.87■□□□□ 0.45
SF1-201ENST00000227503 ZC3H13Q5T200 1668 aaKnown RBP17.87■□□□□ 0.45
SF1-201ENST00000227503 GAS2L3Q86XJ1 694 aa17.87■□□□□ 0.45
SF1-201ENST00000227503 WWC1Q8IX03 1113 aa17.87■□□□□ 0.45
SF1-201ENST00000227503 ARID3AQ99856 593 aa17.87■□□□□ 0.45
SF1-201ENST00000227503 PPLO60437 1756 aa17.86■□□□□ 0.45
SF1-201ENST00000227503 SHPRHQ149N8 1683 aa17.86■□□□□ 0.45
SF1-201ENST00000227503 PLEKHG5O94827 1062 aa17.86■□□□□ 0.45
SF1-201ENST00000227503 MRE11P49959 708 aa17.86■□□□□ 0.45
SF1-201ENST00000227503 TRAK1Q9UPV9 953 aa17.86■□□□□ 0.45
SF1-201ENST00000227503 FRMPD1Q5SYB0 1578 aa17.86■□□□□ 0.45
SF1-201ENST00000227503 CHGAP10645 457 aaKnown RBP17.86■□□□□ 0.45
SF1-201ENST00000227503 SLC12A5Q9H2X9 1139 aa17.85■□□□□ 0.45
SF1-201ENST00000227503 RBM10P98175 930 aaKnown RBP17.85■□□□□ 0.45
SF1-201ENST00000227503 RLBP1P12271 317 aa17.85■□□□□ 0.45
SF1-201ENST00000227503 QRICH2Q9H0J4 1663 aa17.84■□□□□ 0.45
SF1-201ENST00000227503 MORC1Q86VD1 984 aa17.84■□□□□ 0.45
SF1-201ENST00000227503 TRIM44Q96DX7 344 aaPredicted RBP17.84■□□□□ 0.45
SF1-201ENST00000227503 RRP7AQ9Y3A4 280 aaKnown RBP17.83■□□□□ 0.45
SF1-201ENST00000227503 POGZQ7Z3K3 1410 aa17.83■□□□□ 0.45
SF1-201ENST00000227503 PDE3AQ14432 1141 aa17.83■□□□□ 0.44
SF1-201ENST00000227503 MLH3Q9UHC1 1453 aa17.83■□□□□ 0.44
SF1-201ENST00000227503 TMEM132EQ6IEE7 984 aa17.82■□□□□ 0.44
SF1-201ENST00000227503 FOXD4L1Q9NU39 408 aa17.82■□□□□ 0.44
SF1-201ENST00000227503 CGNL1Q0VF96 1302 aa17.82■□□□□ 0.44
SF1-201ENST00000227503 CHMP5Q9NZZ3 219 aa17.81■□□□□ 0.44
SF1-201ENST00000227503 RPGRIP1LQ68CZ1 1315 aa17.81■□□□□ 0.44
SF1-201ENST00000227503 IQSEC2Q5JU85 1478 aa17.81■□□□□ 0.44
SF1-201ENST00000227503 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
SF1-201ENST00000227503 USP32Q8NFA0 1604 aa17.81■□□□□ 0.44
SF1-201ENST00000227503 NINLQ9Y2I6 1382 aa17.81■□□□□ 0.44
SF1-201ENST00000227503 GGT6Q6P531 493 aa17.81■□□□□ 0.44
SF1-201ENST00000227503 KIAA1211Q6ZU35 1233 aa17.81■□□□□ 0.44
SF1-201ENST00000227503 TNNT2P45379 298 aaPredicted RBP17.8■□□□□ 0.44
SF1-201ENST00000227503 RUNDC1Q96C34 613 aa17.8■□□□□ 0.44
SF1-201ENST00000227503 HECW2Q9P2P5 1572 aa17.8■□□□□ 0.44
SF1-201ENST00000227503 CFAP65Q6ZU64 1925 aaKnown RBP17.79■□□□□ 0.44
SF1-201ENST00000227503 C22orf23Q9BZE7 217 aa17.79■□□□□ 0.44
SF1-201ENST00000227503 ABCC3O15438 1527 aa17.79■□□□□ 0.44
SF1-201ENST00000227503 PODXL2Q9NZ53 605 aa17.78■□□□□ 0.44
SF1-201ENST00000227503 CD109Q6YHK3 1445 aa17.78■□□□□ 0.44
SF1-201ENST00000227503 TCP11L2Q8N4U5 519 aa17.78■□□□□ 0.44
SF1-201ENST00000227503 CFAP74Q9C0B2 1584 aa17.77■□□□□ 0.44
SF1-201ENST00000227503 MTHFSP49914 203 aa17.76■□□□□ 0.43
SF1-201ENST00000227503 RARSP54136 660 aaKnown RBP17.76■□□□□ 0.43
SF1-201ENST00000227503 PUS7Q96PZ0 661 aaKnown RBP17.76■□□□□ 0.43
SF1-201ENST00000227503 GLI2P10070 1586 aa17.75■□□□□ 0.43
SF1-201ENST00000227503 WDR63Q8IWG1 891 aa17.75■□□□□ 0.43
SF1-201ENST00000227503 SIGLEC1Q9BZZ2 1709 aa17.75■□□□□ 0.43
SF1-201ENST00000227503 TULP4Q9NRJ4 1543 aa17.75■□□□□ 0.43
SF1-201ENST00000227503 ZNF692Q9BU19 519 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms